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Sahil Islam

Publications and source records attributed to Sahil Islam.

3 recordsLinked to original sources

Length scale of cellular activity determines signatures of epithelial remodeling

Cellular activity drives epithelial fluidization --- a widespread phenomenon observed during tissue development, remodeling, and repair both in vivo and in vitro. Yet the physical origins and spatial organization of active forces vary widely across biological systems and are often represented by a single generic mechanism in theoretical models. Here, using an active vertex model, we systematically compare four modes of epithelial activity spanning subcellular to tissue scales: apolar motility, polar motility, fluctuating contractility, and mechanochemical regulation. Although all four mechanisms drive the same global transition from a solid-like rectangular tissue to a fluid-like circular morphology, they reach this state through distinct pathways --- differing in the rates and topology of junctional rearrangements, cell elimination, and collective motion and leave distinguishable signatures in tissue architecture, cell dynamics, and mechanical relaxation. Among these observables, spatial velocity correlations directly capture the spatial organization of activity: their correlation length and functional form together resolve all four mechanisms. The robustness of these signatures across activity strengths suggests that spatial velocity correlations offer an experimentally accessible means of identifying the physical origin of epithelial activity from live-cell imaging alone.

physics.bio-ph

Motility-Driven Viscoelastic Control of Tissue Morphology in Presomitic Mesoderm

Embryonic tissues deform across broad spatial and temporal scales and relax stress through active rearrangements. A quantitative link between cell-scale activity, spatial forcing, and emergent tissue-scale mechanics remains incomplete. Here, we use a vertex-based tissue model with active force fluctuations to study how motility controls viscoelastic response. After validation against experimental presomitic mesoderm relaxation dynamics, we extract intrinsic mechanical timescales using stress relaxation and oscillatory shear. The model captures motility-dependent shifts between elastic and viscous behavior and the coexistence of fast relaxation with long-lived residual stress. When subjected to spatially patterned, temporally pulsed forcing, tissues behave as mechanical filters: long-wavelength inputs are accumulated, whereas short-wavelength, cell-scale perturbations are rapidly erased, largely independent of motility. Simulations with localized motility hotspots, motivated by spatially confined FGF signaling reported in vertebrate limb development, produce sustained protrusive tissue deformations consistent with experimentally observed early bud-like morphologies. Together, these results establish a minimal framework linking motility-driven activity to wavelength-selective mechanical memory and emergent tissue patterning.

physics.bio-ph

Effect of mobility in the rock-paper-scissor dynamics with high mortality

In the evolutionary dynamics of a rock-paper-scissor (RPS) model, the effect of natural death plays a major role in determining the fate of the system. Coexistence, being an unstable fixed point of the model becomes very sensitive towards this parameter. In order to study the effect of mobility in such a system which has explicit dependence on mortality, we perform Monte Carlo simulation on a $2$-dimensional lattice having three cyclically-competing species. The spatio-temporal dynamics has been studied along with the two-site correlation function. Spatial distribution exhibits emergence of spiral patterns in the presence of diffusion. It reveals that the joint effect of death rate and diffusion (migration) leads to new coexistence and extinction scenarios.

cond-mat.stat-mech