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Saiprasad Ravishankar

Publications and source records attributed to Saiprasad Ravishankar.

At least 19 recordsLinked to original sources

KELP: K-space-conditioned Estimation of Learned Sampling Patterns for Scan-Adaptive Multi-Coil MRI

Deep learning techniques have gained considerable attention for accelerating MRI acquisition while maintaining image quality. In this work, we present a convolutional neural network (CNN)-based framework for predicting scan-adaptive undersampling patterns directly from low-frequency multi-coil $k$-space data. Unlike approaches that optimize sampling patterns during training or rely on nearest-neighbor search at inference, our method is trained using precomputed scan-adaptive optimized masks as supervised labels and predicts a scan-specific sampling pattern in a single forward pass. The training procedure alternates between optimizing the sampling network and a reconstruction network, allowing the learned masks to adapt to reconstruction performance. Experiments on the fastMRI multi-coil knee dataset demonstrate competitive reconstruction quality compared with existing population- and scan-adaptive sampling approaches at $4\times$ and $8\times$ acceleration factors. In addition, the proposed method enables efficient scan-specific mask prediction with inference cost independent of the training dictionary size.

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Decoupled Data Consistency with Diffusion Purification for Image Restoration

Diffusion models have recently gained traction as a powerful class of deep generative priors, excelling in a wide range of image restoration tasks due to their exceptional ability to model data distributions. To solve image restoration problems, many existing techniques achieve data consistency by incorporating additional likelihood gradient steps into the reverse sampling process of diffusion models. However, the additional gradient steps pose a challenge for real-world practical applications as they incur a large computational overhead, thereby increasing inference time. They also present additional difficulties when using accelerated diffusion model samplers, as the number of data consistency steps is limited by the number of reverse sampling steps. In this work, we propose a novel diffusion-based image restoration solver that addresses these issues by decoupling the reverse process from the data consistency steps. Our method involves alternating between a reconstruction phase to maintain data consistency and a refinement phase that enforces the prior via diffusion purification. Our approach demonstrates versatility, making it highly adaptable for efficient problem-solving in latent space. Additionally, it reduces the necessity for numerous sampling steps through the integration of consistency models. The efficacy of our approach is validated through comprehensive experiments across various image restoration tasks, including image denoising, deblurring, inpainting, and super-resolution.

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How Architecture and Training Affect TPC Representations Across Experiments

Deep-learning efforts have increasingly shifted toward foundation model approaches. In experimental physics, this allows models and learned representations to be reused beyond the experiments in which they were developed. This work evaluates the reusability of representations across experiments and detector systems using probes on frozen encoders. These probes reveal task-relevant structure before downstream adaptation, complementing fine-tuning. Together with random-weight controls, they distinguish contributions from architecture and encoder training that downstream performance alone cannot resolve. Time projection chamber (TPC) data provide a useful testbed because events from TPC systems can be represented as variable-length sparse tensors, while detector geometries, event topologies, and scientific tasks can differ substantially. We investigate whether fixed-dimensional TPC event representations can be reused across classification tasks, experiments, and detector systems. Sparse ResNet and PointNet-style encoders produce 512-dimensional embeddings for four datasets from the GADGET II TPC and AT-TPC. Randomly initialized encoders isolate the contribution from architecture before supervised training. We then train each encoder on a classification task, freeze its parameters, and train a linear or nonlinear probe for each downstream task. We find that this architecture-induced structure remains useful across experiments and detector systems. The randomly initialized PointNet-style representation is highly informative on several tasks. The two architectures organize their embedding spaces differently, but neither exhibits a large, systematic loss of utility cross-detector. These results show that architecture is a major source of task-relevant structure in TPC embeddings and should be treated explicitly when assessing representation learning and developing reusable detector models.

cs.LG↗

ForcingDAS: Unified and Robust Data Assimilation via Diffusion Forcing

Data assimilation (DA) estimates the state of an evolving dynamical system from noisy, partial observations, and is widely used in scientific simulation as well as weather and climate science. In practice, filtering methods rely on frame-to-frame transition models. However, these models are fragile when observations are non-Markovian (when they form only a partial slice of a higher-dimensional latent state as in real-world weather data): they tend to accumulate errors over long horizons. At the same time, learned DA methods typically commit to a single regime, either filtering (nowcasting, real-time forecasting) or smoothing (retrospective reanalysis), which splits what should be a shared prior across application-specific pipelines. To address both issues, we introduce ForcingDAS, a unified and robust DA framework. Built on Diffusion Forcing with an independent noise level assigned to each frame, ForcingDAS learns a joint-trajectory prior instead of frame-to-frame transitions. This allows it to capture long-horizon temporal dependencies and reduce error accumulation. In addition, the same trained model spans the full filtering to smoothing spectrum at inference time. Specifically, nowcasting, fixed-lag smoothing, and batch reanalysis are selected through the inference schedule alone, without retraining. We evaluate ForcingDAS on 2D Navier-Stokes vorticity, precipitation nowcasting, and global atmospheric state estimation. Across all settings, a single model is competitive with or outperforms both learned and classical baselines that are specialized for individual regimes, with the largest gains observed on real-world weather benchmarks.

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Fractional-gradient Sparsity with Autoencoding Sequential Deep Image Prior for 3D CT Reconstruction

3D volumetric reconstruction from incomplete or noisy measurements is a fundamental problem in medical imaging and computational tomography. Deep image prior (DIP)-based methods have recently shown strong capability for solving inverse problems without requiring large training datasets. However, directly extending DIP to 3D reconstruction by fully 3D networks can incur high computational cost, while slice-by-slice 2D DIP approaches may lead to inter-slice inconsistencies due to the lack of explicit regularization along the third direction. In this paper, we propose a novel volumetric reconstruction framework, Fractional-gradient Autoencoding Sequential Tomography DIP (FAST-DIP), which integrates input-adaptive sequential deep image prior modeling of slices with fractional sparsity regularization to capture inter-slice dependencies. Specifically, we introduce a fractional l1/l2-based sparsity prior on the gradients along the slice (z) direction to explicitly enforce inter-slice structural consistency. We further provide theoretical analysis of the proposed alternating minimization algorithm under the majorization-minimization (MM) framework, establishing monotonic descent of the objective function and convergence to a critical point under the Kurdyka-Lojasiewicz (KL) property. Experimental results for 3D X-ray computed tomography (CT) reconstruction demonstrate that the proposed method improved reconstruction quality and structural consistency compared with existing DIP-based approaches.

cs.CE↗

Trajectory Constraints for Imaging Inverse Problems

Diffusion-based and iterative methods have become effective tools for solving imaging inverse problems. Their reconstruction process naturally forms a trajectory of intermediate estimates. Although these intermediate estimates define a reconstruction trajectory, most methods do not explicitly regularize the transitions between consecutive states. To address this limitation, we introduce TRACE, a training-free TRAjectory-Constrained rEconstruction framework that stabilizes the reconstruction path by coupling adjacent states along the trajectory. This gives a trajectory-level model that can be interpreted as a sequence of proximal updates. Since the exact proximal update is generally intractable, we approximate it with a neural mapping. This yields a diffusion-like reconstruction process with an explicit coupling between neighboring states. We provide a stability analysis showing that temporal coupling bounds trajectory variation and that this control is preserved under untrained network updates. Experiments on linear and nonlinear image reconstruction tasks show that TRACE improves reconstruction quality. Trajectory-level analyses and ablations confirm that temporal coupling directly affects state transitions along the reconstruction path.

cs.CV↗

L-FAME: Longitudinal Focused Attention Meditation EEG Dataset and Benchmark

We introduce a novel Longitudinal Focused Attention Meditation Electroencephalography (L-FAME) dataset and an accompanying benchmark, designed to foster research into the neural effects of various meditation practices and the evolution of these effects over a six-week training period. The dataset contains EEG recordings and psychological assessments from 74 healthy college participants, collected at two distinct time points: pre-intervention and post-intervention. Participants were randomly assigned to one of three distinct meditation groups: two mantra-based techniques (SA-TA-NA-MA and Hare Krishna) and one Breath Focus practice. Leveraging this unique longitudinal and comparative dataset, we propose a benchmark suite comprising three distinct classification tasks: (1) cognitive state decoding to distinguish between resting and meditation states, (2) fine-grained classification of the specific meditation techniques, and (3) cross-session adaptation to evaluate model generalization across the longitudinal time gap. We provide comprehensive baseline results for these tasks utilizing a range of classical machine learning algorithms and deep learning architectures. The complete dataset, preprocessing pipelines, and benchmark evaluation code will be publicly released, offering a valuable resource and a standardized framework for the development and comparison of new analytical methods in computational meditation research and EEG-based machine learning. The dataset is available at https://huggingface.co/datasets/L-FAME-Dataset-Benchmark/L-FAME

eess.SP↗

Dynamic MRI Reconstruction Via Dual Deep Priors and Low-Rank Plus Sparse Modeling

Dynamic MRI reconstruction from undersampled measurements is a challenging inverse problem that requires preserving both spatial reconstruction quality and temporal consistency across the frames of the cine series. While recent learning-based approaches achieve strong performance, they heavily rely on large training, mostly fully sampled, datasets, and may otherwise generalize poorly. In contrast, training-data-free methods such as deep image prior (DIP) adapt directly to individual scans but often fail to fully exploit temporal structure and are prone to overfitting. They are particularly attractive for dynamic MRI due to the limited large, public, high-quality datasets. In this work, we propose a structured DIP framework for dynamic MRI reconstruction that explicitly models spatiotemporal correlations through a low-rank plus sparse (L+S) decomposition. Instead of directly reconstructing the cine image series, we parameterize the low-rank background and sparse dynamic components using two DIP untrained convolutional neural networks, jointly optimized using accelerated extrapolated ADMM (eADMM). This formulation combines the implicit regularization of DIP with the interpretability of classical L+S regularization. We provide a convergence analysis for the proposed eADMM algorithm in the presence of DIP-based nonconvex parameterizations. In particular, we establish a sufficient descent property and show that every cluster point of the generated sequence is a critical point of the associated Lyapunov function. Across various acceleration factors, our numerical results demonstrate that the proposed method consistently outperforms classical reconstruction and existing supervised and unsupervised MRI reconstruction techniques.

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Scan-Adaptive Dynamic MRI Undersampling Using a Dictionary of Efficiently Learned Patterns

Cardiac MRI is limited by long acquisition times, which can lead to patient discomfort and motion artifacts. We aim to accelerate Cartesian dynamic cardiac MRI by learning efficient, scan-adaptive undersampling patterns that preserve diagnostic image quality. We develop a learning-based framework for designing scan- or slice-adaptive Cartesian undersampling masks tailored to dynamic cardiac MRI. Undersampling patterns are optimized using fully sampled training dynamic time-series data. At inference time, a nearest-neighbor search in low-frequency $k$-space selects an optimized mask from a dictionary of learned patterns. Our learned sampling approach improves reconstruction quality across multiple acceleration factors on public and in-house cardiac MRI datasets, including PSNR gains of 2-3 dB, reduced NMSE, improved SSIM, and higher radiologist ratings. The proposed scan-adaptive sampling framework enables faster and higher-quality dynamic cardiac MRI by adapting $k$-space sampling to individual scans.

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Improving Efficiency of Diffusion Models via Multi-Stage Framework and Tailored Multi-Decoder Architectures

Diffusion models, emerging as powerful deep generative tools, excel in various applications. They operate through a two-steps process: introducing noise into training samples and then employing a model to convert random noise into new samples (e.g., images). However, their remarkable generative performance is hindered by slow training and sampling. This is due to the necessity of tracking extensive forward and reverse diffusion trajectories, and employing a large model with numerous parameters across multiple timesteps (i.e., noise levels). To tackle these challenges, we present a multi-stage framework inspired by our empirical findings. These observations indicate the advantages of employing distinct parameters tailored to each timestep while retaining universal parameters shared across all time steps. Our approach involves segmenting the time interval into multiple stages where we employ custom multi-decoder U-net architecture that blends time-dependent models with a universally shared encoder. Our framework enables the efficient distribution of computational resources and mitigates inter-stage interference, which substantially improves training efficiency. Extensive numerical experiments affirm the effectiveness of our framework, showcasing significant training and sampling efficiency enhancements on three state-of-the-art diffusion models, including large-scale latent diffusion models. Furthermore, our ablation studies illustrate the impact of two important components in our framework: (i) a novel timestep clustering algorithm for stage division, and (ii) an innovative multi-decoder U-net architecture, seamlessly integrating universal and customized hyperparameters.

cs.CV↗

Scan-Adaptive MRI Undersampling Using Neighbor-based Optimization (SUNO)

Accelerated MRI involves collecting partial $k$-space measurements to reduce acquisition time, patient discomfort, and motion artifacts, and typically uses regular undersampling patterns or human-designed schemes. Recent works have studied population-adaptive sampling patterns learned from a group of patients (or scans). However, such patterns can be sub-optimal for individual scans, as they may fail to capture scan or slice-specific details, and their effectiveness can depend on the size and composition of the population. To overcome this issue, we propose a framework for jointly learning scan-adaptive Cartesian undersampling patterns and a corresponding reconstruction model from a training set. We use an alternating algorithm for learning the sampling patterns and the reconstruction model where we use an iterative coordinate descent (ICD) based offline optimization of scan-adaptive $k$-space sampling patterns for each example in the training set. A nearest neighbor search is then used to select the scan-adaptive sampling pattern at test time from initially acquired low-frequency $k$-space information. We applied the proposed framework (dubbed SUNO) to the fastMRI multi-coil knee and brain datasets, demonstrating improved performance over the currently used undersampling patterns at both $4\times$ and $8\times$ acceleration factors in terms of both visual quality and quantitative metrics. The code for the proposed framework is available at https://github.com/sidgautam95/adaptive-sampling-mri-suno. This paper has been accepted for publication in IEEE Transactions on Computational Imaging. The final published version is available at https://doi.org/10.1109/TCI.2026.3653330.

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Robust Physics-based Deep MRI Reconstruction Via Diffusion Purification

Deep learning (DL) techniques have been extensively employed in magnetic resonance imaging (MRI) reconstruction, delivering notable performance enhancements over traditional non-DL methods. Nonetheless, recent studies have identified vulnerabilities in these models during testing, namely, their susceptibility to (\textit{i}) worst-case measurement perturbations and to (\textit{ii}) variations in training/testing settings like acceleration factors and k-space sampling locations. This paper addresses the robustness challenges by leveraging diffusion models. In particular, we present a robustification strategy that improves the resilience of DL-based MRI reconstruction methods by utilizing pretrained diffusion models as noise purifiers. In contrast to conventional robustification methods for DL-based MRI reconstruction, such as adversarial training (AT), our proposed approach eliminates the need to tackle a minimax optimization problem. It only necessitates fine-tuning on purified examples. Our experimental results highlight the efficacy of our approach in mitigating the aforementioned instabilities when compared to leading robustification approaches for deep MRI reconstruction, including AT and randomized smoothing.

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Understanding Untrained Deep Models for Inverse Problems: Algorithms and Theory

In recent years, deep learning methods have been extensively developed for inverse imaging problems (IIPs), encompassing supervised, self-supervised, and generative approaches. Most of these methods require large amounts of labeled or unlabeled training data to learn effective models. However, in many practical applications, such as medical image reconstruction, extensive training datasets are often unavailable or limited. A significant milestone in addressing this challenge came in 2018 with the work of Ulyanov et al., which introduced the Deep Image Prior (DIP)--the first training-data-free neural network method for IIPs. Unlike conventional deep learning approaches, DIP requires only a convolutional neural network, the noisy measurements, and a forward operator. By leveraging the implicit regularization of deep networks initialized with random noise, DIP can learn and restore image structures without relying on external datasets. However, a well-known limitation of DIP is its susceptibility to overfitting, primarily due to the over-parameterization of the network. In this tutorial paper, we provide a comprehensive review of DIP, including a theoretical analysis of its training dynamics. We also categorize and discuss recent advancements in DIP-based methods aimed at mitigating overfitting, including techniques such as regularization, network re-parameterization, and early stopping. Furthermore, we discuss approaches that combine DIP with pre-trained neural networks, present empirical comparison results against data-centric methods, and highlight open research questions and future directions.

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Tada-DIP: Input-adaptive Deep Image Prior for One-shot 3D Image Reconstruction

Deep Image Prior (DIP) has recently emerged as a promising one-shot neural-network based image reconstruction method. However, DIP has seen limited application to 3D image reconstruction problems. In this work, we introduce Tada-DIP, a highly effective and fully 3D DIP method for solving 3D inverse problems. By combining input-adaptation and denoising regularization, Tada-DIP produces high-quality 3D reconstructions while avoiding the overfitting phenomenon that is common in DIP. Experiments on sparse-view X-ray computed tomography reconstruction validate the effectiveness of the proposed method, demonstrating that Tada-DIP produces much better reconstructions than training-data-free baselines and achieves reconstruction performance on par with a supervised network trained using a large dataset with fully-sampled volumes.

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NERD: Network-Regularized Diffusion Sampling For 3D Computed Tomography

Numerous diffusion model (DM)-based methods have been proposed for solving inverse imaging problems. Among these, a recent line of work has demonstrated strong performance by formulating sampling as an optimization procedure that enforces measurement consistency, forward diffusion consistency, and both step-wise and backward diffusion consistency. However, these methods have only considered 2D reconstruction tasks and do not directly extend to 3D image reconstruction problems, such as in Computed Tomography (CT). To bridge this gap, we propose NEtwork-Regularized diffusion sampling for 3D CT (NERD) by incorporating an L1 regularization into the optimization objective. This regularizer encourages spatial continuity across adjacent slices, reducing inter-slice artifacts and promoting coherent volumetric reconstructions. Additionally, we introduce two efficient optimization strategies to solve the resulting objective: one based on the Alternating Direction Method of Multipliers (ADMM) and another based on the Primal-Dual Hybrid Gradient (PDHG) method. Experiments on medical 3D CT data demonstrate that our approach achieves either state-of-the-art or highly competitive results.

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Sparse Methods for Vector Embeddings of TPC Data

Time Projection Chambers (TPCs) are versatile detectors that reconstruct charged-particle tracks in an ionizing medium, enabling sensitive measurements across a wide range of nuclear physics experiments. We explore sparse convolutional networks for representation learning on TPC data, finding that a sparse ResNet architecture, even with randomly set weights, provides useful structured vector embeddings of events. Pre-training this architecture on a simple physics-motivated binary classification task further improves the embedding quality. Using data from the GAseous Detector with GErmanium Tagging (GADGET) II TPC, a detector optimized for measuring low-energy $β$-delayed particle decays, we represent raw pad-level signals as sparse tensors, train Minkowski Engine ResNet models, and probe the resulting event-level embeddings which reveal rich event structure. As a cross-detector test, we embed data from the Active-Target TPC (AT-TPC) -- a detector designed for nuclear reaction studies in inverse kinematics -- using the same encoder. We find that even an untrained sparse ResNet model provides useful embeddings of AT-TPC data, and we observe improvements when the model is trained on GADGET data. Together, these results highlight the potential of sparse convolutional techniques as a general tool for representation learning in diverse TPC experiments.

cs.LG↗

Variational Learning Finds Flatter Solutions at the Edge of Stability

Variational Learning (VL) has recently gained popularity for training deep neural networks. Part of its empirical success can be explained by theories such as PAC-Bayes bounds, minimum description length and marginal likelihood, but little has been done to unravel the implicit regularization in play. Here, we analyze the implicit regularization of VL through the Edge of Stability (EoS) framework. EoS has previously been used to show that gradient descent can find flat solutions and we extend this result to show that VL can find even flatter solutions. This result is obtained by controlling the shape of the variational posterior as well as the number of posterior samples used during training. The derivation follows in a similar fashion as in the standard EoS literature for deep learning, by first deriving a result for a quadratic problem and then extending it to deep neural networks. We empirically validate these findings on a wide variety of large networks, such as ResNet and ViT, to find that the theoretical results closely match the empirical ones. Ours is the first work to analyze the EoS dynamics of VL.

stat.ML↗

Robust MRI Reconstruction by Smoothed Unrolling (SMUG)

As the popularity of deep learning (DL) in the field of magnetic resonance imaging (MRI) continues to rise, recent research has indicated that DL-based MRI reconstruction models might be excessively sensitive to minor input disturbances, including worst-case additive perturbations. This sensitivity often leads to unstable, aliased images. This raises the question of how to devise DL techniques for MRI reconstruction that can be robust to train-test variations. To address this problem, we propose a novel image reconstruction framework, termed Smoothed Unrolling (SMUG), which advances a deep unrolling-based MRI reconstruction model using a randomized smoothing (RS)-based robust learning approach. RS, which improves the tolerance of a model against input noises, has been widely used in the design of adversarial defense approaches for image classification tasks. Yet, we find that the conventional design that applies RS to the entire DL-based MRI model is ineffective. In this paper, we show that SMUG and its variants address the above issue by customizing the RS process based on the unrolling architecture of a DL-based MRI reconstruction model. Compared to the vanilla RS approach, we show that SMUG improves the robustness of MRI reconstruction with respect to a diverse set of instability sources, including worst-case and random noise perturbations to input measurements, varying measurement sampling rates, and different numbers of unrolling steps. Furthermore, we theoretically analyze the robustness of our method in the presence of perturbations.

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