arXiv subjects

Samad Hajinazar

Publications and source records attributed to Samad Hajinazar.

10 recordsLinked to original sources

arXiv2025

XtalOpt Version 14: Variable-Composition Crystal Structure Search for Functional Materials Through Pareto Optimization

Version 14 of XtalOpt, an evolutionary multi-objective global optimization algorithm for crystal structure prediction, is now available for download from its official website https://xtalopt.github.io, and the Computer Physics Communications Library. The new version of the code is designed to perform a ground state search for crystal structures with variable compositions by integrating a suite of ab initio methods alongside classical and machine-learning potentials for structural relaxation. The multi-objective search framework has been enhanced through the introduction of Pareto optimization, enabling efficient discovery of functional materials. Herein, we describe the newly implemented methodologies, provide detailed instructions for their use, and present an overview of additional improvements included in the latest version of the code.

physics.comp-ph↗

arXiv2024

Powder X-Ray Diffraction Assisted Evolutionary Algorithm for Crystal Structure Prediction

Experimentally obtained X-ray diffraction (XRD) patterns can be difficult to solve, precluding the full characterization of materials, pharmaceuticals, and geological compounds. Herein, we propose a method based upon a multi-objective evolutionary search that uses both a structure's enthalpy and similarity to a reference XRD pattern (constituted by a list of peak positions and their intensities) to facilitate structure solution of inorganic systems. Because the similarity index is computed for locally optimized cells that are subsequently distorted to find the best match with the reference, this process transcends both computational (e.g. choice of theoretical method, and 0 K approximation) and experimental (e.g. external stimuli, and metastability) limitations. We illustrate how the proposed methodology can be employed to successfully uncover complex crystal structures by applying it to a range of test cases, including inorganic minerals, pure elements ramp-compressed to extreme conditions, and molecular crystals. The results demonstrate that our approach not only improves the accuracy of structure prediction but also significantly reduces the time required to achieve reliable solutions, thus providing a powerful tool for the advancement of materials science and related fields.

cond-mat.mtrl-sci↗

arXiv2024

Impact of Data Bias on Machine Learning for Crystal Compound Synthesizability Predictions

Machine learning models are susceptible to being misled by biases in training data that emphasize incidental correlations over the intended learning task. In this study, we demonstrate the impact of data bias on the performance of a machine learning model designed to predict the synthesizability likelihood of crystal compounds. The model performs a binary classification on labeled crystal samples. Despite using the same architecture for the machine learning model, we showcase how the model's learning and prediction behavior differs once trained on distinct data. We use two data sets for illustration: a mixed-source data set that integrates experimental and computational crystal samples and a single-source data set consisting of data exclusively from one computational database. We present simple procedures to detect data bias and to evaluate its effect on the model's performance and generalization. This study reveals how inconsistent, unbalanced data can propagate bias, undermining real-world applicability even for advanced machine learning techniques.

cond-mat.mtrl-sci↗

arXiv2024

XtalOpt Version 13: Multi-Objective Evolutionary Search for Novel Functional Materials

Version 13 of XtalOpt, an evolutionary algorithm for crystal structure prediction, is now available for download from the CPC program library or the XtalOpt website, https://xtalopt.github.io. In the new version of the XtalOpt code, a general platform for multi-objective global optimization is implemented. This functionality is designed to facilitate the search for (meta)stable phases of functional materials through minimization of the enthalpy of a crystalline system coupled with the simultaneous optimization of any desired properties that are specified by the user. The code is also able to perform a constrained search by filtering the parent pool of structures based on a user-specified feature, while optimizing multiple objectives. Here, we present the implementation and various technical details, and we provide a brief overview of additional improvements that have been introduced in the new version of XtalOpt.

physics.comp-ph↗

arXiv2024

Full-bandwidth anisotropic Migdal-Eliashberg theory and its application to superhydrides

Migdal-Eliashberg theory is one of the state-of-the-art methods for describing conventional superconductors from first principles. However, widely used implementations assume a constant density of states around the Fermi level, which hinders a proper description of materials with distinct features in its vicinity. Here, we present an implementation of the Migdal-Eliashberg theory within the EPW code that considers the full electronic structure and accommodates scattering processes beyond the Fermi surface. To significantly reduce computational costs, we introduce a non-uniform sampling scheme along the imaginary axis. We demonstrate the power of our implementation by applying it to the sodalite-like clathrates YH$_6$ and CaH$_6$, and to the covalently-bonded H$_3$S and D$_3$S. Furthermore, we investigate the effect of maximizing the density of states at the Fermi level in doped H$_3$S and BaSiH$_8$ within the full-bandwidth treatment compared to the constant-density-of-states approximation. Our findings highlight the importance of this advanced treatment in such complex materials.

cond-mat.supr-con↗

arXiv2023

Structurally Constrained Evolutionary Algorithm for the Discovery and Design of Metastable Phases

Metastable materials are abundant in nature and technology, showcasing remarkable properties that inspire innovative materials design. However, traditional crystal structure prediction methods, which rely solely on energetic factors to determine a structure's fitness, are not suitable for predicting the vast number of potentially synthesizable phases that represent a local minimum corresponding to a state in thermodynamic equilibrium. Here, we present a new approach for the prediction of metastable phases with specific structural features, and interface this method with the XtalOpt evolutionary algorithm. Our method relies on structural features that include the local crystalline order (e.g., the coordination number or chemical environment), and symmetry (e.g., Bravais lattice and space group) to filter the parent pool of an evolutionary crystal structure search. The effectiveness of this approach is benchmarked on three known metastable systems: XeN$_8$, with a two-dimensional polymeric nitrogen sublattice, brookite TiO$_2$, and a high pressure BaH$_4$ phase that was recently characterized. Additionally, a newly predicted metastable melaminate salt, $P$-1 WC$_{3}$N$_{6}$, was found to possess an energy that is lower than two phases proposed in a recent computational study. The method presented here could help in identifying the structures of compounds that have already been synthesized, and developing new synthesis targets with desired properties.

cond-mat.mtrl-sci↗

arXiv2023

Electron-phonon physics from first principles using the EPW code

EPW is an open-source software for $\textit{ab initio}$ calculations of electron-phonon interactions and related materials properties. The code combines density functional perturbation theory and maximally-localized Wannier functions to efficiently compute electron-phonon coupling matrix elements on ultra-fine Brillouin zone grids. This data is employed for predictive calculations of temperature-dependent properties and phonon-assisted quantum processes in bulk solids and low-dimensional materials. Here, we report on significant new developments in the code that occurred during the period 2016-2022, namely: a transport module for the calculation of charge carrier mobility and conductivity under electric and magnetic fields within the $\textit{ab initio}$ Boltzmann transport equation; a superconductivity module for the calculation of critical temperature and gap structure in phonon-mediated superconductors within the $\textit{ab initio}$ anisotropic multi-band Eliashberg theory; an optics module for calculations of phonon-assisted indirect transitions; a module for the calculation of small and large polarons without supercells using the $\textit{ab initio}$ polaron equations; and a module for calculating electron-phonon couplings, band structure renormalization, and temperature-dependent optical spectra using the special displacement method. For each capability, we outline the methodology and implementation, and provide example calculations. We describe recent code refactoring to prepare EPW for exascale architectures, we discuss efficient parallelization strategies, and report on extreme parallel scaling tests.

cond-mat.mtrl-sci↗

arXiv2021

Inhomogeneous Kondo-lattice in geometrically frustrated Pr$_{2}$Ir$_{2}$O$_{7}$

Magnetic fluctuations induced by geometric frustration of local Ir-spins disturb the formation of long range magnetic order in the family of pyrochlore iridates, R$_{2}$Ir$_{2}$O$_{7}$ (R = lanthanide)$^{1}$. As a consequence, Pr$_{2}$Ir$_{2}$O$_{7}$ lies at a tuning-free antiferromagnetic-to-paramagnetic quantum critical point and exhibits a diverse array of complex phenomena including Kondo effect, biquadratic band structure, metallic spin-liquid (MSL), and anomalous Hall effect$^{2-5}$. Using spectroscopic imaging with the scanning tunneling microscope, complemented with machine learning K-means clustering analysis, density functional theory, and theoretical modeling, we probe the local electronic states in single crystal of Pr$_{2}$Ir$_{2}$O$_{7}$ and discover an electronic phase separation. Nanoscale regions with a well-defined Kondo resonance are interweaved with a non-magnetic metallic phase with Kondo-destruction. Remarkably, the spatial nanoscale patterns display a correlation-driven fractal geometry with power-law behavior extended over two and a half decades, consistent with being in proximity to a critical point. Our discovery reveals a new nanoscale tuning route, viz. using a spatial variation of the electronic potential as a means of adjusting the balance between Kondo entanglement and geometric frustration.

cond-mat.str-el↗

arXiv2020

MAISE: Construction of neural network interatomic models and evolutionary structure optimization

Module for ab initio structure evolution (MAISE) is an open-source package for materials modeling and prediction. The code's main feature is an automated generation of neural network (NN) interatomic potentials for use in global structure searches. The systematic construction of Behler-Parrinello-type NN models approximating ab initio energy and forces relies on two approaches introduced in our recent studies. An evolutionary sampling scheme for generating reference structures improves the NNs' mapping of regions visited in unconstrained searches, while a stratified training approach enables the creation of standardized NN models for multiple elements. A more flexible NN architecture proposed here expands the applicability of the stratified scheme for an arbitrary number of elements. The full workflow in the NN development is managed with a customizable 'MAISE-NET' wrapper written in Python. The global structure optimization capability in MAISE is based on an evolutionary algorithm applicable for nanoparticles, films, and bulk crystals. A multitribe extension of the algorithm allows for an efficient simultaneous optimization of nanoparticles in a given size range. Implemented structure analysis functions include fingerprinting with radial distribution functions and finding space groups with the SPGLIB tool. This work overviews MAISE's available features, constructed models, and confirmed predictions.

physics.comp-ph↗

arXiv2017

Stratified construction of neural network based interatomic models for multicomponent materials

Recent application of neural networks (NNs) to modeling interatomic interactions has shown the learning machines' encouragingly accurate performance for select elemental and multicomponent systems. In this study, we explore the possibility of building a library of NN-based models by introducing a hierarchical NN training. In such a stratified procedure NNs for multicomponent systems are obtained by sequential training from the bottom up: first unaries, then binaries, and so on. Advantages of constructing NN sets with shared parameters include acceleration of the training process and intact description of the constituent systems. We use an automated generation of diverse structure sets for NN training on density functional theory-level reference energies. In the test case of Cu, Pd, Ag, Cu-Pd, Cu-Ag, Pd-Ag, and Cu-Pd-Ag systems, NNs trained in the traditional and stratified fashions are found to have essentially identical accuracy for defect energies, phonon dispersions, formation energies, etc. The models' robustness is further illustrated via unconstrained evolutionary structure searches in which the NN is used for the local optimization of crystal unit cells.

cond-mat.mtrl-sci↗