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Saman Halgamuge

Publications and source records attributed to Saman Halgamuge.

At least 37 records · Page 2Linked to original sources

Invariant-Stratified Propagation for Expressive Graph Neural Networks

Graph Neural Networks (GNNs) face fundamental limitations in expressivity and capturing structural heterogeneity. Standard message-passing architectures are constrained by the 1-dimensional Weisfeiler-Leman (1-WL) test, unable to distinguish graphs beyond degree sequences, and aggregate information uniformly from neighbors, failing to capture how nodes occupy different structural positions within higher-order patterns. While methods exist to achieve higher expressivity, they incur prohibitive computational costs and lack unified frameworks for flexibly encoding diverse structural properties. To address these limitations, we introduce Invariant-Stratified Propagation (ISP), a framework comprising both a novel WL variant (ISP-WL) and its efficient neural network implementation (ISPGNN). ISP stratifies nodes according to graph invariants, processing them in hierarchical strata that reveal structural distinctions invisible to 1-WL. Through hierarchical structural heterogeneity encoding, ISP quantifies differences in nodes' structural positions within higher-order patterns, distinguishing interactions where participants occupy different roles from those with uniform participation. We provide formal theoretical analysis establishing enhanced expressivity beyond 1-WL, convergence guarantees, and inherent resistance to oversmoothing. Extensive experiments across graph classification, node classification, and influence estimation demonstrate consistent improvements over standard architectures and state-of-the-art expressive baselines.

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SphOR: A Representation Learning Perspective on Open-set Recognition for Identifying Unknown Classes in Deep Learning Models

The reliance on Deep Neural Network (DNN)-based classifiers in safety-critical and real-world applications necessitates Open-Set Recognition (OSR). OSR enables the identification of input data from classes unknown during training as unknown, as opposed to misclassifying them as belonging to a known class. DNNs consist of a feature extraction backbone and classifier head; however, most OSR methods typically train both components jointly, often yielding feature representations that adapt poorly to unknown data. Other approaches employ off-the-shelf objectives, such as supervised contrastive learning, which are not specifically designed for OSR. To address these limitations, we propose SpHOR, which explicitly shapes the feature space via supervised representation learning, before training a classifier. Instead of relying on generic feature learning, SpHOR custom-designs representation learning for OSR through three key innovations: (1) enforcing discriminative class-specific features via orthogonal label embeddings, ensuring clearer separation between classes. (2) imposing a spherical constraint, modeling representations as a mixture of von Mises-Fisher distributions. (3) integrating Mixup and Label Smoothing (LS) directly into the representation learning stage. To quantify how these techniques enhance representations for OSR, we introduce two metrics: the Angular Separability (AS) and Norm Separability (NS). Combining all three innovations, SpHOR achieves state-of-the-art results (in AUROC and OSCR) across various coarse-grained and fine-grained open-set benchmarks, particularly excelling on the Semantic Shift Benchmark with improvements up to 5.1\%. Code at https://github.com/nadarasarbahavan/SpHOR

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FRAME-C: A knowledge-augmented deep learning pipeline for classifying multi-electrode array electrophysiological signals

Amyotrophic lateral sclerosis (ALS) is a fatal neurodegenerative disorder characterized by motor neuron degeneration, with alterations in neural excitability serving as key indicators. Recent advancements in induced pluripotent stem cell (iPSC) technology have enabled the generation of human iPSC-derived neuronal cultures, which, when combined with multi-electrode array (MEA) electrophysiology, provide rich spatial and temporal electrophysiological data. Traditionally, MEA data is analyzed using handcrafted features based on potentially imperfect domain knowledge, which while useful may not fully capture all useful characteristics inherent in the data. Machine learning, particularly deep learning, has the potential to automatically learn relevant characteristics from raw data without solely relying on handcrafted feature extraction. However, handcrafted features remain critical for encoding domain knowledge and improving interpretability, especially with limited or noisy data. This study introduces FRAME-C, a knowledge-augmented machine learning pipeline that combines domain knowledge, raw spike waveform data, and deep learning techniques to classify MEA signals and identify ALS-specific phenotypes. FRAME-C leverages deep learning to learn important features from spike waveforms while incorporating handcrafted features such as spike amplitude, inter-spike interval, and spike duration, preserving key spatial and temporal information. We validate FRAME-C on both simulated and real MEA data from human iPSC-derived neuronal cultures, demonstrating superior performance over existing classification methods. FRAME-C shows over 11% improvement on real data and up to 25% on simulated data. We also show FRAME-C can evaluate handcrafted feature importance, providing insights into ALS phenotypes.

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Graph-Eq: Discovering Mathematical Equations using Graph Generative Models

The ability to discover meaningful, accurate, and concise mathematical equations that describe datasets is valuable across various domains. Equations offer explicit relationships between variables, enabling deeper insights into underlying data patterns. Most existing equation discovery methods rely on genetic programming, which iteratively searches the equation space but is often slow and prone to overfitting. By representing equations as directed acyclic graphs, we leverage the use of graph neural networks to learn the underlying semantics of equations, and generate new, previously unseen equations. Although graph generative models have been shown to be successful in discovering new types of graphs in many fields, there application in discovering equations remains largely unexplored. In this work, we propose Graph-EQ, a deep graph generative model designed for efficient equation discovery. Graph-EQ uses a conditional variational autoencoder (CVAE) to learn a rich latent representation of the equation space by training it on a large corpus of equations in an unsupervised manner. Instead of directly searching the equation space, we employ Bayesian optimization to efficiently explore this learned latent space. We show that the encoder-decoder architecture of Graph-Eq is able to accurately reconstruct input equations. Moreover, we show that the learned latent representation can be sampled and decoded into valid equations, including new and previously unseen equations in the training data. Finally, we assess Graph-Eq's ability to discover equations that best fit a dataset by exploring the latent space using Bayesian optimization. Latent space exploration is done on 20 dataset with known ground-truth equations, and Graph-Eq is shown to successfully discover the grountruth equation in the majority of datasets.

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TT-MPD: Test Time Model Pruning and Distillation

Pruning can be an effective method of compressing large pre-trained models for inference speed acceleration. Previous pruning approaches rely on access to the original training dataset for both pruning and subsequent fine-tuning. However, access to the training data can be limited due to concerns such as data privacy and commercial confidentiality. Furthermore, with covariate shift (disparities between test and training data distributions), pruning and finetuning with training datasets can hinder the generalization of the pruned model to test data. To address these issues, pruning and finetuning the model with test time samples becomes essential. However, test-time model pruning and fine-tuning incur additional computation costs and slow down the model's prediction speed, thus posing efficiency issues. Existing pruning methods are not efficient enough for test time model pruning setting, since finetuning the pruned model is needed to evaluate the importance of removable components. To address this, we propose two variables to approximate the fine-tuned accuracy. We then introduce an efficient pruning method that considers the approximated finetuned accuracy and potential inference latency saving. To enhance fine-tuning efficiency, we propose an efficient knowledge distillation method that only needs to generate pseudo labels for a small set of finetuning samples one time, thereby reducing the expensive pseudo-label generation cost. Experimental results demonstrate that our method achieves a comparable or superior tradeoff between test accuracy and inference latency, with a 32% relative reduction in pruning and finetuning time compared to the best existing method.

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AniFaceDiff: Animating Stylized Avatars via Parametric Conditioned Diffusion Models

Animating stylized avatars with dynamic poses and expressions has attracted increasing attention for its broad range of applications. Previous research has made significant progress by training controllable generative models to synthesize animations based on reference characteristics, pose, and expression conditions. However, the mechanisms used in these methods to control pose and expression often inadvertently introduce unintended features from the target motion, while also causing a loss of expression-related details, particularly when applied to stylized animation. This paper proposes a new method based on Stable Diffusion, called AniFaceDiff, incorporating a new conditioning module for animating stylized avatars. First, we propose a refined spatial conditioning approach by Facial Alignment to prevent the inclusion of identity characteristics from the target motion. Then, we introduce an Expression Adapter that incorporates additional cross-attention layers to address the potential loss of expression-related information. Our approach effectively preserves pose and expression from the target video while maintaining input image consistency. Extensive experiments demonstrate that our method achieves state-of-the-art results, showcasing superior image quality, preservation of reference features, and expression accuracy, particularly for out-of-domain animation across diverse styles, highlighting its versatility and strong generalization capabilities. This work aims to enhance the quality of virtual stylized animation for positive applications. To promote responsible use in virtual environments, we contribute to the advancement of detection for generative content by evaluating state-of-the-art detectors, highlighting potential areas for improvement, and suggesting solutions.

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GINN-KAN: Interpretability pipelining with applications in Physics Informed Neural Networks

Neural networks are powerful function approximators, yet their ``black-box" nature often renders them opaque and difficult to interpret. While many post-hoc explanation methods exist, they typically fail to capture the underlying reasoning processes of the networks. A truly interpretable neural network would be trained similarly to conventional models using techniques such as backpropagation, but additionally provide insights into the learned input-output relationships. In this work, we introduce the concept of interpretability pipelineing, to incorporate multiple interpretability techniques to outperform each individual technique. To this end, we first evaluate several architectures that promise such interpretability, with a particular focus on two recent models selected for their potential to incorporate interpretability into standard neural network architectures while still leveraging backpropagation: the Growing Interpretable Neural Network (GINN) and Kolmogorov Arnold Networks (KAN). We analyze the limitations and strengths of each and introduce a novel interpretable neural network GINN-KAN that synthesizes the advantages of both models. When tested on the Feynman symbolic regression benchmark datasets, GINN-KAN outperforms both GINN and KAN. To highlight the capabilities and the generalizability of this approach, we position GINN-KAN as an alternative to conventional black-box networks in Physics-Informed Neural Networks (PINNs). We expect this to have far-reaching implications in the application of deep learning pipelines in the natural sciences. Our experiments with this interpretable PINN on 15 different partial differential equations demonstrate that GINN-KAN augmented PINNs outperform PINNs with black-box networks in solving differential equations and surpass the capabilities of both GINN and KAN.

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A Deep Reinforcement Learning Approach for Cost Optimized Workflow Scheduling in Cloud Computing Environments

Cost optimization is a common goal of workflow schedulers operating in cloud computing environments. The use of spot instances is a potential means of achieving this goal, as they are offered by cloud providers at discounted prices compared to their on-demand counterparts in exchange for reduced reliability. This is due to the fact that spot instances are subjected to interruptions when spare computing capacity used for provisioning them is needed back owing to demand variations. Also, the prices of spot instances are not fixed as pricing is dependent on long term supply and demand. The possibility of interruptions and pricing variations associated with spot instances adds a layer of uncertainty to the general problem of workflow scheduling across cloud computing environments. These challenges need to be efficiently addressed for enjoying the cost savings achievable with the use of spot instances without compromising the underlying business requirements. To this end, in this paper we use Deep Reinforcement Learning for developing an autonomous agent capable of scheduling workflows in a cost efficient manner by using an intelligent mix of spot and on-demand instances. The proposed solution is implemented in the open source container native Argo workflow engine that is widely used for executing industrial workflows. The results of the experiments demonstrate that the proposed scheduling method is capable of outperforming the current benchmarks.

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Reinforcement Learning based Workflow Scheduling in Cloud and Edge Computing Environments: A Taxonomy, Review and Future Directions

Deep Reinforcement Learning (DRL) techniques have been successfully applied for solving complex decision-making and control tasks in multiple fields including robotics, autonomous driving, healthcare and natural language processing. The ability of DRL agents to learn from experience and utilize real-time data for making decisions makes it an ideal candidate for dealing with the complexities associated with the problem of workflow scheduling in highly dynamic cloud and edge computing environments. Despite the benefits of DRL, there are multiple challenges associated with the application of DRL techniques including multi-objectivity, curse of dimensionality, partial observability and multi-agent coordination. In this paper, we comprehensively analyze the challenges and opportunities associated with the design and implementation of DRL oriented solutions for workflow scheduling in cloud and edge computing environments. Based on the identified characteristics, we propose a taxonomy of workflow scheduling with DRL. We map reviewed works with respect to the taxonomy to identify their strengths and weaknesses. Based on taxonomy driven analysis, we propose novel future research directions for the field.

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Discriminative Sample-Guided and Parameter-Efficient Feature Space Adaptation for Cross-Domain Few-Shot Learning

In this paper, we look at cross-domain few-shot classification which presents the challenging task of learning new classes in previously unseen domains with few labelled examples. Existing methods, though somewhat effective, encounter several limitations, which we alleviate through two significant improvements. First, we introduce a lightweight parameter-efficient adaptation strategy to address overfitting associated with fine-tuning a large number of parameters on small datasets. This strategy employs a linear transformation of pre-trained features, significantly reducing the trainable parameter count. Second, we replace the traditional nearest centroid classifier with a discriminative sample-aware loss function, enhancing the model's sensitivity to the inter- and intra-class variances within the training set for improved clustering in feature space. Empirical evaluations on the Meta-Dataset benchmark showcase that our approach not only improves accuracy up to 7.7\% and 5.3\% on previously seen and unseen datasets, respectively, but also achieves the above performance while being at least $\sim3\times$ more parameter-efficient than existing methods, establishing a new state-of-the-art in cross-domain few-shot learning. Our code is available at https://github.com/rashindrie/DIPA.

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Day-ahead regional solar power forecasting with hierarchical temporal convolutional neural networks using historical power generation and weather data

Regional solar power forecasting, which involves predicting the total power generation from all rooftop photovoltaic systems in a region holds significant importance for various stakeholders in the energy sector. However, the vast amount of solar power generation and weather time series from geographically dispersed locations that need to be considered in the forecasting process makes accurate regional forecasting challenging. Therefore, previous work has limited the focus to either forecasting a single time series (i.e., aggregated time series) which is the addition of all solar generation time series in a region, disregarding the location-specific weather effects or forecasting solar generation time series of each PV site (i.e., individual time series) independently using location-specific weather data, resulting in a large number of forecasting models. In this work, we propose two deep-learning-based regional forecasting methods that can effectively leverage both types of time series (aggregated and individual) with weather data in a region. We propose two hierarchical temporal convolutional neural network architectures (HTCNN) and two strategies to adapt HTCNNs for regional solar power forecasting. At first, we explore generating a regional forecast using a single HTCNN. Next, we divide the region into multiple sub-regions based on weather information and train separate HTCNNs for each sub-region; the forecasts of each sub-region are then added to generate a regional forecast. The proposed work is evaluated using a large dataset collected over a year from 101 locations across Western Australia to provide a day ahead forecast. We compare our approaches with well-known alternative methods and show that the sub-region HTCNN requires fewer individual networks and achieves a forecast skill score of 40.2% reducing a statistically significant error by 6.5% compared to the best counterpart.

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GINN-LP: A Growing Interpretable Neural Network for Discovering Multivariate Laurent Polynomial Equations

Traditional machine learning is generally treated as a black-box optimization problem and does not typically produce interpretable functions that connect inputs and outputs. However, the ability to discover such interpretable functions is desirable. In this work, we propose GINN-LP, an interpretable neural network to discover the form and coefficients of the underlying equation of a dataset, when the equation is assumed to take the form of a multivariate Laurent Polynomial. This is facilitated by a new type of interpretable neural network block, named the "power-term approximator block", consisting of logarithmic and exponential activation functions. GINN-LP is end-to-end differentiable, making it possible to use backpropagation for training. We propose a neural network growth strategy that will enable finding the suitable number of terms in the Laurent polynomial that represents the data, along with sparsity regularization to promote the discovery of concise equations. To the best of our knowledge, this is the first model that can discover arbitrary multivariate Laurent polynomial terms without any prior information on the order. Our approach is first evaluated on a subset of data used in SRBench, a benchmark for symbolic regression. We first show that GINN-LP outperforms the state-of-the-art symbolic regression methods on datasets generated using 48 real-world equations in the form of multivariate Laurent polynomials. Next, we propose an ensemble method that combines our method with a high-performing symbolic regression method, enabling us to discover non-Laurent polynomial equations. We achieve state-of-the-art results in equation discovery, showing an absolute improvement of 7.1% over the best contender, by applying this ensemble method to 113 datasets within SRBench with known ground-truth equations.

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When To Grow? A Fitting Risk-Aware Policy for Layer Growing in Deep Neural Networks

Neural growth is the process of growing a small neural network to a large network and has been utilized to accelerate the training of deep neural networks. One crucial aspect of neural growth is determining the optimal growth timing. However, few studies investigate this systematically. Our study reveals that neural growth inherently exhibits a regularization effect, whose intensity is influenced by the chosen policy for growth timing. While this regularization effect may mitigate the overfitting risk of the model, it may lead to a notable accuracy drop when the model underfits. Yet, current approaches have not addressed this issue due to their lack of consideration of the regularization effect from neural growth. Motivated by these findings, we propose an under/over fitting risk-aware growth timing policy, which automatically adjusts the growth timing informed by the level of potential under/overfitting risks to address both risks. Comprehensive experiments conducted using CIFAR-10/100 and ImageNet datasets show that the proposed policy achieves accuracy improvements of up to 1.3% in models prone to underfitting while achieving similar accuracies in models suffering from overfitting compared to the existing methods.

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Undercover Deepfakes: Detecting Fake Segments in Videos

The recent renaissance in generative models, driven primarily by the advent of diffusion models and iterative improvement in GAN methods, has enabled many creative applications. However, each advancement is also accompanied by a rise in the potential for misuse. In the arena of the deepfake generation, this is a key societal issue. In particular, the ability to modify segments of videos using such generative techniques creates a new paradigm of deepfakes which are mostly real videos altered slightly to distort the truth. This paradigm has been under-explored by the current deepfake detection methods in the academic literature. In this paper, we present a deepfake detection method that can address this issue by performing deepfake prediction at the frame and video levels. To facilitate testing our method, we prepared a new benchmark dataset where videos have both real and fake frame sequences with very subtle transitions. We provide a benchmark on the proposed dataset with our detection method which utilizes the Vision Transformer based on Scaling and Shifting to learn spatial features, and a Timeseries Transformer to learn temporal features of the videos to help facilitate the interpretation of possible deepfakes. Extensive experiments on a variety of deepfake generation methods show excellent results by the proposed method on temporal segmentation and classical video-level predictions as well. In particular, the paradigm we address will form a powerful tool for the moderation of deepfakes, where human oversight can be better targeted to the parts of videos suspected of being deepfakes. All experiments can be reproduced at: github.com/rgb91/temporal-deepfake-segmentation.

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NAPA-VQ: Neighborhood Aware Prototype Augmentation with Vector Quantization for Continual Learning

Catastrophic forgetting; the loss of old knowledge upon acquiring new knowledge, is a pitfall faced by deep neural networks in real-world applications. Many prevailing solutions to this problem rely on storing exemplars (previously encountered data), which may not be feasible in applications with memory limitations or privacy constraints. Therefore, the recent focus has been on Non-Exemplar based Class Incremental Learning (NECIL) where a model incrementally learns about new classes without using any past exemplars. However, due to the lack of old data, NECIL methods struggle to discriminate between old and new classes causing their feature representations to overlap. We propose NAPA-VQ: Neighborhood Aware Prototype Augmentation with Vector Quantization, a framework that reduces this class overlap in NECIL. We draw inspiration from Neural Gas to learn the topological relationships in the feature space, identifying the neighboring classes that are most likely to get confused with each other. This neighborhood information is utilized to enforce strong separation between the neighboring classes as well as to generate old class representative prototypes that can better aid in obtaining a discriminative decision boundary between old and new classes. Our comprehensive experiments on CIFAR-100, TinyImageNet, and ImageNet-Subset demonstrate that NAPA-VQ outperforms the State-of-the-art NECIL methods by an average improvement of 5%, 2%, and 4% in accuracy and 10%, 3%, and 9% in forgetting respectively. Our code can be found in https://github.com/TamashaM/NAPA-VQ.git.

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Multi-Resolution, Multi-Horizon Distributed Solar PV Power Forecasting with Forecast Combinations

Distributed, small-scale solar photovoltaic (PV) systems are being installed at a rapidly increasing rate. This can cause major impacts on distribution networks and energy markets. As a result, there is a significant need for improved forecasting of the power generation of these systems at different time resolutions and horizons. However, the performance of forecasting models depends on the resolution and horizon. Forecast combinations (ensembles), that combine the forecasts of multiple models into a single forecast may be robust in such cases. Therefore, in this paper, we provide comparisons and insights into the performance of five state-of-the-art forecast models and existing forecast combinations at multiple resolutions and horizons. We propose a forecast combination approach based on particle swarm optimization (PSO) that will enable a forecaster to produce accurate forecasts for the task at hand by weighting the forecasts produced by individual models. Furthermore, we compare the performance of the proposed combination approach with existing forecast combination approaches. A comprehensive evaluation is conducted using a real-world residential PV power data set measured at 25 houses located in three locations in the United States. The results across four different resolutions and four different horizons show that the PSO-based forecast combination approach outperforms the use of any individual forecast model and other forecast combination counterparts, with an average Mean Absolute Scaled Error reduction by 3.81% compared to the best performing individual model. Our approach enables a solar forecaster to produce accurate forecasts for their application regardless of the forecast resolution or horizon.

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A machine learning accelerated inverse design of underwater acoustic polyurethane coatings with cylindrical voids

Here, we report the development of a detailed "Materials Informatics" framework for the design of acoustic coatings for underwater sound attenuation through integrating Machine Learning (ML) and statistical optimization algorithms with a Finite Element Model (FEM). The finite element models were developed to simulate the realistic performance of the acoustic coatings based on polyurethane (PU) elastomers with embedded cylindrical voids. The FEM results revealed that the frequency-dependent viscoelastic behavior of the polyurethane matrix has a significant impact on the magnitude and frequency of the absorption peak associated with the cylinders at low frequencies, which has been commonly ignored in previous studies on similar systems. The data generated from the FEM was used to train a Deep Neural Network (DNN) to accelerate the design process, and subsequently, was integrated with a Genetic Algorithm (GA) to determine the optimal geometric parameters of the cylinders to achieve maximized, broadband, low-frequency waterborne sound attenuation. A significant, broadband, low-frequency attenuation is achieved by optimally configuring the layers of cylindrical voids and using attenuation mechanisms, including Fabry-Pérot resonance and Bragg scattering of the layers of voids. Integration of the machine learning technique into the optimization algorithm further accelerated the exploration of the high dimensional design space for the targeted performance. The developed DNN exhibited significantly increased speed (by a factor of $4.5\times 10^3$ ) in predicting the absorption coefficient compared to the conventional FEM(s). Therefore, the acceleration brought by the materials informatics framework brings a paradigm shift to the design and development of acoustic coatings compared to the conventional trial-and-error practices.

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Self Organizing Nebulous Growths for Robust and Incremental Data Visualization

Non-parametric dimensionality reduction techniques, such as t-SNE and UMAP, are proficient in providing visualizations for datasets of fixed sizes. However, they cannot incrementally map and insert new data points into an already provided data visualization. We present Self-Organizing Nebulous Growths (SONG), a parametric nonlinear dimensionality reduction technique that supports incremental data visualization, i.e., incremental addition of new data while preserving the structure of the existing visualization. In addition, SONG is capable of handling new data increments, no matter whether they are similar or heterogeneous to the already observed data distribution. We test SONG on a variety of real and simulated datasets. The results show that SONG is superior to Parametric t-SNE, t-SNE and UMAP in incremental data visualization. Specifically, for heterogeneous increments, SONG improves over Parametric t-SNE by 14.98 % on the Fashion MNIST dataset and 49.73% on the MNIST dataset regarding the cluster quality measured by the Adjusted Mutual Information scores. On similar or homogeneous increments, the improvements are 8.36% and 42.26% respectively. Furthermore, even when the above datasets are presented all at once, SONG performs better or comparable to UMAP, and superior to t-SNE. We also demonstrate that the algorithmic foundations of SONG render it more tolerant to noise compared to UMAP and t-SNE, thus providing greater utility for data with high variance, high mixing of clusters, or noise.

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