arXiv subjects

Saman Muthukumarana

Publications and source records attributed to Saman Muthukumarana.

5 recordsLinked to original sources

arXiv2026

Correcting Mode Proportion Bias in Generalized Bayesian Inference via a Weighted Kernel Stein Discrepancy

Generalized Bayesian Inference (GBI) provides a flexible framework for updating prior distributions using various loss functions instead of the traditional likelihoods, thereby enhancing the model robustness to model misspecification. However, GBI often suffers the problem associated with intractable likelihoods. Kernelized Stein Discrepancy (KSD), as utilized in a recent study, addresses this challenge by relying only on the gradient of the log-likelihood. Despite this innovation, KSD-Bayes suffers from critical pathologies, including insensitivity to well-separated modes in multimodal posteriors. To address this limitation, we propose a weighted KSD method that retains computational efficiency while effectively capturing multimodal structures. Our method improves the GBI framework for handling intractable multimodal posteriors while maintaining key theoretical properties such as posterior consistency and asymptotic normality. Experimental results demonstrate that our method substantially improves mode sensitivity compared to standard KSD-Bayes, while retaining robust performance in unimodal settings and in the presence of outliers.

cs.LG↗

arXiv2024

FRODO: A novel approach to micro-macro multilevel regression

Within the field of hierarchical modelling, little attention is paid to micro-macro models: those in which group-level outcomes are dependent on covariates measured at the level of individuals within groups. Although such models are perhaps underrepresented in the literature, they have applications in economics, epidemiology, and the social sciences. Despite the strong mathematical similarities between micro-macro and measurement error models, few efforts have been made to apply the much better-developed methodology of the latter to the former. Here, we present a new empirical Bayesian technique for micro-macro data, called FRODO (Functional Regression On Densities of Observations). The method jointly infers group-specific densities for multilevel covariates and uses them as functional predictors in a functional linear regression, resulting in a model that is analogous to a generalized additive model (GAM). In doing so, it achieves a level of generality comparable to more sophisticated methods developed for errors-in-variables models, while further leveraging the larger group sizes characteristic of multilevel data to provide richer information about the within-group covariate distributions. After explaining the hierarchical structure of FRODO, its power and versatility are demonstrated on several simulated datasets, showcasing its ability to accommodate a wide variety of covariate distributions and regression models.

stat.ME↗

arXiv2024

A Bayesian factor analysis model for high-dimensional microbiome count data

Dimension reduction techniques are among the most essential analytical tools in the analysis of high-dimensional data. Generalized principal component analysis (PCA) is an extension to standard PCA that has been widely used to identify low-dimensional features in high-dimensional discrete data, such as binary, multi-category and count data. For microbiome count data in particular, the multinomial PCA is a natural counterpart of the standard PCA. However, this technique fails to account for the excessive number of zero values, which is frequently observed in microbiome count data. To allow for sparsity, zero-inflated multivariate distributions can be used. We propose a zero-inflated probabilistic PCA model for latent factor analysis. The proposed model is a fully Bayesian factor analysis technique that is appropriate for microbiome count data analysis. In addition, we use the mean-field-type variational family to approximate the marginal likelihood and develop a classification variational approximation algorithm to fit the model. We demonstrate the efficiency of our procedure for predictions based on the latent factors and the model parameters through simulation experiments, showcasing its superiority over competing methods. This efficiency is further illustrated with two real microbiome count datasets. The method is implemented in R.

stat.ME↗

arXiv2020

A New Approach to Inference in Multi-Survey Studies with Unknown Population Size

We investigate a Poisson sampling design in the presence of unknown selection probabilities when applied to a population of unknown size for multiple sampling occasions. The fixed-population model is adopted and extended upon for inference. The complete minimal sufficient statistic is derived for the sampling model parameters and fixed-population parameter vector. The Rao-Blackwell version of population quantity estimators is detailed. An application is applied to an emprical population. The extended inferential framework is found to have much potential and utility for empirical studies.

stat.ME↗

arXiv2014

Bayesian Hypothesis Assessment in Two-arm Trials Using Relative Belief Ratios

This paper develops a Bayesian approach for assessing equivalence and non-inferiority hypotheses in two-arm trials using relative belief ratios. A relative belief ratio is a measure of statistical evidence and can indicate evidence either for or against a hypothesis. In addition to the relative belief ratio, we also compute a measure of the strength of this evidence as a calibration of the relative belief ratio. Furthermore, we make use of the relative belief ratio as a measure of evidence, to assess whether a given prior induces bias either for or against a hypothesis. Prior elicitation, model checking and checking for prior-data conflict procedures are developed to ensure that the choices of model and prior made are relevant to the specific application. We highlight the applicability of the approach and illustrate the proposed method by applying it to a data set obtained from a two-arm clinical trial.

stat.AP↗