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Samik Sen

Publications and source records attributed to Samik Sen.

7 recordsLinked to original sources
arXiv2009

Effects of Quantum Vacuum Fluctuations of the Electric Field on DNA Condensation

By assuming that not only counter-ions but DNA molecules as well are thermally distributed according to a Boltzmann law, we propose a modified Poisson-Boltzmann equation at the classical level as starting point to compute the effects of quantum fluctuations of the electric field on the interaction among DNA-cation complexes. The latter are modeled here as infinite one-dimensional wires ($\delta$-functions). Our goal is to single out such quantum-vacuum-driven interaction from the counterion-induced and water-related interactions. We obtain a universal, frustration-free Casimir-like (codimension 2) interaction that extensive numerical analysis show to be a good candidate to explain the formation and stability of DNA aggregates. Such Casimir energy is computed for a variety of configurations of up to 19 DNA strands in a hexagonal array. It is found to be strongly many-body.

q-bio.QM↗
arXiv2008

Do quantum effects hold together DNA condensates?

The classical electrostatic interaction between DNA molecules in water in the presence of counterions is reconsidered and we propose it is governed by a modified Poisson-Boltzmann equation. Quantum fluctuations are then studied and shown to lead to a vacuum interaction that is numerically computed for several configurations of many DNA strands and found to be strongly many-body. This Casimir vacuum interaction can be the ``glue'' holding together DNA molecules into aggregates.

q-bio.QM↗
arXiv2004

Semiclassical Shor's Algorithm

We propose a semiclassical version of Shor's quantum algorithm to factorize integer numbers, based on spin-1/2 SU(2) generalized coherent states. Surprisingly, we find evidences that the algorithm's success probability is not too severely modified by our semiclassical approximation. This suggests that it is worth pursuing practical implementations of the algorithm on semiclassical devices.

quant-ph↗
arXiv2003

Chiral Dirac Fermions on the Lattice using Geometric Discretisation

We propose a discretisation scheme based on the Dirac-Kahler formalism (DK) in which the algebraic relations between continuum operators ${\wedge, d, \star}$ are captured by their discrete analogues, allowing the construction of the relevant projection operators necessary to prevent species doubling. We thus avoid the traditional form of species doubling as well as spectral doubling, which does not occur in the DK setting. Chirality is also captured, since we have $\star$ from geometric discretisation.

hep-th↗
arXiv2003

A Cubic Whitney and Further Developments in Geometric Discretisation

Geometric discretisation draws analogies between discrete objects and operations on a complex with continuum ones on a manifold. We generalise the theory to the cubic case and incorporate metric, by adding volume factors to our discrete Hodge star and then by modifying our inner product which leads to the same result.

hep-th↗
arXiv2000

A geometric discretisation scheme applied to the Abelian Chern-Simons theory

We give a detailed general description of a recent geometrical discretisation scheme and illustrate, by explicit numerical calculation, the scheme's ability to capture topological features. The scheme is applied to the Abelian Chern-Simons theory and leads, after a necessary field doubling, to an expression for the discrete partition function in terms of untwisted Reidemeister torsion and of various triangulation dependent factors. The discrete partition function is evaluated computationally for various triangulations of $S^3$ and of lens spaces. The results confirm that the discretisation scheme is triangulation independent and coincides with the continuum partition function

hep-th↗