arXiv subjects

Samuel García Vázquez

Publications and source records attributed to Samuel García Vázquez.

2 recordsLinked to original sources

arXiv2026

Integrating Semantics into Research Data Management: Modelling and Validating Materials Science Experiment Workflows

The incorporation of Semantic Web technologies within scientific environments is becoming an increasingly popular Research Data Management (RDM) practice. While ontologies offer flexible, reusable and machine-readable vocabularies to describe domain-specific research data, Knowledge Graphs (KGs) facilitate the integration of heterogeneous data sources into an interoperable collection. Furthermore, KGs offer additional advantages, notably the use of expressive SPARQL queries, or the ability to define complex data validation rules with SHACL. This work describes the modelling of a relational RDM system with an ontology, and the subsequent construction of a KG based on it. Enabled by the highly interconnected nature of research data and experiment workflows present in the system, we not only show how we can easily and reliably build an efficient KG from such domain-specific RDM systems, but also how doing so enables more advanced use cases. This is demonstrated by the modelling of ideal counterparts for the experiment workflows logged in the KG, which are then used to programmatically generate SHACL shapes that fully validate the conformance of the latter. By integrating this functionality within a UI, we allow researchers to plan, reuse, share, and track the progress of their daily experiments.

cs.DB↗

arXiv2026

Field report from Collaborative Research Center 1625: Heterogeneous research data management using ontology representations

The goal of the Collaborative Research Center 1625 is the establishment of a scientific basis for the atomic-scale understanding and design of multifunctional compositionally complex solid solution surfaces. Next to materials synthesis in form of thin-film materials libraries, various materials characterization and simulations techniques are used to explore the materials data space of the problem. Machine learning and artificial intelligence techniques guide its exploration and navigation. The effective use of the combined heterogeneous data requires more than just a simple research data management plan. Consequently, our research data management system maps different data modalities in different formats and resolutions from different labs to the correct spatial locations on physical samples. Besides a graphical user interface, the system can also be accessed through an application programming interface for reproducible data-driven workflows. It is implemented by a combination of a custom research data management system designed around a relational database, an ontology which builds upon materials science-specific ontologies, and the construction of a Knowledge Graph. Along with the technical solutions of research data management system and lessons learned, first use cases are shown which were not possible (or at least much harder to achieve) without it.

cond-mat.mtrl-sci↗