arXiv subjects

Sanjay Purushotham

Publications and source records attributed to Sanjay Purushotham.

27 records · Page 2Linked to original sources

arXiv2021

Generating Thermal Human Faces for Physiological Assessment Using Thermal Sensor Auxiliary Labels

Thermal images reveal medically important physiological information about human stress, signs of inflammation, and emotional mood that cannot be seen on visible images. Providing a method to generate thermal faces from visible images would be highly valuable for the telemedicine community in order to show this medical information. To the best of our knowledge, there are limited works on visible-to-thermal (VT) face translation, and many current works go the opposite direction to generate visible faces from thermal surveillance images (TV) for law enforcement applications. As a result, we introduce favtGAN, a VT GAN which uses the pix2pix image translation model with an auxiliary sensor label prediction network for generating thermal faces from visible images. Since most TV methods are trained on only one data source drawn from one thermal sensor, we combine datasets from faces and cityscapes. These combined data are captured from similar sensors in order to bootstrap the training and transfer learning task, especially valuable because visible-thermal face datasets are limited. Experiments on these combined datasets show that favtGAN demonstrates an increase in SSIM and PSNR scores of generated thermal faces, compared to training on a single face dataset alone.

cs.CV↗

arXiv2020

The Use of AI for Thermal Emotion Recognition: A Review of Problems and Limitations in Standard Design and Data

With the increased attention on thermal imagery for Covid-19 screening, the public sector may believe there are new opportunities to exploit thermal as a modality for computer vision and AI. Thermal physiology research has been ongoing since the late nineties. This research lies at the intersections of medicine, psychology, machine learning, optics, and affective computing. We will review the known factors of thermal vs. RGB imaging for facial emotion recognition. But we also propose that thermal imagery may provide a semi-anonymous modality for computer vision, over RGB, which has been plagued by misuse in facial recognition. However, the transition to adopting thermal imagery as a source for any human-centered AI task is not easy and relies on the availability of high fidelity data sources across multiple demographics and thorough validation. This paper takes the reader on a short review of machine learning in thermal FER and the limitations of collecting and developing thermal FER data for AI training. Our motivation is to provide an introductory overview into recent advances for thermal FER and stimulate conversation about the limitations in current datasets.

cs.CV↗

arXiv2020

Exploratory Analysis of Covid-19 Tweets using Topic Modeling, UMAP, and DiGraphs

This paper illustrates five different techniques to assess the distinctiveness of topics, key terms and features, speed of information dissemination, and network behaviors for Covid19 tweets. First, we use pattern matching and second, topic modeling through Latent Dirichlet Allocation (LDA) to generate twenty different topics that discuss case spread, healthcare workers, and personal protective equipment (PPE). One topic specific to U.S. cases would start to uptick immediately after live White House Coronavirus Task Force briefings, implying that many Twitter users are paying attention to government announcements. We contribute machine learning methods not previously reported in the Covid19 Twitter literature. This includes our third method, Uniform Manifold Approximation and Projection (UMAP), that identifies unique clustering-behavior of distinct topics to improve our understanding of important themes in the corpus and help assess the quality of generated topics. Fourth, we calculated retweeting times to understand how fast information about Covid19 propagates on Twitter. Our analysis indicates that the median retweeting time of Covid19 for a sample corpus in March 2020 was 2.87 hours, approximately 50 minutes faster than repostings from Chinese social media about H7N9 in March 2013. Lastly, we sought to understand retweet cascades, by visualizing the connections of users over time from fast to slow retweeting. As the time to retweet increases, the density of connections also increase where in our sample, we found distinct users dominating the attention of Covid19 retweeters. One of the simplest highlights of this analysis is that early-stage descriptive methods like regular expressions can successfully identify high-level themes which were consistently verified as important through every subsequent analysis.

cs.SI↗

arXiv2017

Benchmark of Deep Learning Models on Large Healthcare MIMIC Datasets

Deep learning models (aka Deep Neural Networks) have revolutionized many fields including computer vision, natural language processing, speech recognition, and is being increasingly used in clinical healthcare applications. However, few works exist which have benchmarked the performance of the deep learning models with respect to the state-of-the-art machine learning models and prognostic scoring systems on publicly available healthcare datasets. In this paper, we present the benchmarking results for several clinical prediction tasks such as mortality prediction, length of stay prediction, and ICD-9 code group prediction using Deep Learning models, ensemble of machine learning models (Super Learner algorithm), SAPS II and SOFA scores. We used the Medical Information Mart for Intensive Care III (MIMIC-III) (v1.4) publicly available dataset, which includes all patients admitted to an ICU at the Beth Israel Deaconess Medical Center from 2001 to 2012, for the benchmarking tasks. Our results show that deep learning models consistently outperform all the other approaches especially when the `raw' clinical time series data is used as input features to the models.

cs.LG↗

arXiv2017

m-TSNE: A Framework for Visualizing High-Dimensional Multivariate Time Series

Multivariate time series (MTS) have become increasingly common in healthcare domains where human vital signs and laboratory results are collected for predictive diagnosis. Recently, there have been increasing efforts to visualize healthcare MTS data based on star charts or parallel coordinates. However, such techniques might not be ideal for visualizing a large MTS dataset, since it is difficult to obtain insights or interpretations due to the inherent high dimensionality of MTS. In this paper, we propose 'm-TSNE': a simple and novel framework to visualize high-dimensional MTS data by projecting them into a low-dimensional (2-D or 3-D) space while capturing the underlying data properties. Our framework is easy to use and provides interpretable insights for healthcare professionals to understand MTS data. We evaluate our visualization framework on two real-world datasets and demonstrate that the results of our m-TSNE show patterns that are easy to understand while the other methods' visualization may have limitations in interpretability.

cs.LG↗

arXiv2017

Measuring and Predicting Tag Importance for Image Retrieval

Textual data such as tags, sentence descriptions are combined with visual cues to reduce the semantic gap for image retrieval applications in today's Multimodal Image Retrieval (MIR) systems. However, all tags are treated as equally important in these systems, which may result in misalignment between visual and textual modalities during MIR training. This will further lead to degenerated retrieval performance at query time. To address this issue, we investigate the problem of tag importance prediction, where the goal is to automatically predict the tag importance and use it in image retrieval. To achieve this, we first propose a method to measure the relative importance of object and scene tags from image sentence descriptions. Using this as the ground truth, we present a tag importance prediction model to jointly exploit visual, semantic and context cues. The Structural Support Vector Machine (SSVM) formulation is adopted to ensure efficient training of the prediction model. Then, the Canonical Correlation Analysis (CCA) is employed to learn the relation between the image visual feature and tag importance to obtain robust retrieval performance. Experimental results on three real-world datasets show a significant performance improvement of the proposed MIR with Tag Importance Prediction (MIR/TIP) system over other MIR systems.

cs.CV↗

arXiv2016

Recurrent Neural Networks for Multivariate Time Series with Missing Values

Multivariate time series data in practical applications, such as health care, geoscience, and biology, are characterized by a variety of missing values. In time series prediction and other related tasks, it has been noted that missing values and their missing patterns are often correlated with the target labels, a.k.a., informative missingness. There is very limited work on exploiting the missing patterns for effective imputation and improving prediction performance. In this paper, we develop novel deep learning models, namely GRU-D, as one of the early attempts. GRU-D is based on Gated Recurrent Unit (GRU), a state-of-the-art recurrent neural network. It takes two representations of missing patterns, i.e., masking and time interval, and effectively incorporates them into a deep model architecture so that it not only captures the long-term temporal dependencies in time series, but also utilizes the missing patterns to achieve better prediction results. Experiments of time series classification tasks on real-world clinical datasets (MIMIC-III, PhysioNet) and synthetic datasets demonstrate that our models achieve state-of-the-art performance and provides useful insights for better understanding and utilization of missing values in time series analysis.

cs.LG↗

arXiv2015

Distilling Knowledge from Deep Networks with Applications to Healthcare Domain

Exponential growth in Electronic Healthcare Records (EHR) has resulted in new opportunities and urgent needs for discovery of meaningful data-driven representations and patterns of diseases in Computational Phenotyping research. Deep Learning models have shown superior performance for robust prediction in computational phenotyping tasks, but suffer from the issue of model interpretability which is crucial for clinicians involved in decision-making. In this paper, we introduce a novel knowledge-distillation approach called Interpretable Mimic Learning, to learn interpretable phenotype features for making robust prediction while mimicking the performance of deep learning models. Our framework uses Gradient Boosting Trees to learn interpretable features from deep learning models such as Stacked Denoising Autoencoder and Long Short-Term Memory. Exhaustive experiments on a real-world clinical time-series dataset show that our method obtains similar or better performance than the deep learning models, and it provides interpretable phenotypes for clinical decision making.

stat.ML↗

arXiv2012

Collaborative Topic Regression with Social Matrix Factorization for Recommendation Systems

Social network websites, such as Facebook, YouTube, Lastfm etc, have become a popular platform for users to connect with each other and share content or opinions. They provide rich information for us to study the influence of user's social circle in their decision process. In this paper, we are interested in examining the effectiveness of social network information to predict the user's ratings of items. We propose a novel hierarchical Bayesian model which jointly incorporates topic modeling and probabilistic matrix factorization of social networks. A major advantage of our model is to automatically infer useful latent topics and social information as well as their importance to collaborative filtering from the training data. Empirical experiments on two large-scale datasets show that our algorithm provides a more effective recommendation system than the state-of-the art approaches. Our results reveal interesting insight that the social circles have more influence on people's decisions about the usefulness of information (e.g., bookmarking preference on Delicious) than personal taste (e.g., music preference on Lastfm). We also examine and discuss solutions on potential information leak in many recommendation systems that utilize social information.

cs.IR↗