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Sarat Moka

Publications and source records attributed to Sarat Moka.

16 recordsLinked to original sources

Missing Data Imputation under Manifold Hypothesis

The manifold hypothesis posits that high-dimensional data are concentrated near a low-dimensional embedded manifold. Recent advances in mixture variational autoencoders (VAEs) provide a powerful tool for extracting such underlying structure in a faithful manner. The resulting geometric structure naturally introduces local and global relationships among variables, thereby providing a systematic way of imputing missing data. We propose a model-based imputation method that enables sampling from \( p(\bm{x}_{\mathrm{mis}} \mid \bm{x}_{\mathrm{obs}}) \) via a sampling-importance-resampling (SIR) procedure, which can be further augmented with a joint diffusion model in the latent space. Our method imputes missing data while respecting the underlying geometry, achieves competitive performance compared to state-of-the-art procedures, quantifies uncertainty in the imputations, and is model-based, thereby enabling on-the-fly imputation without rerunning the entire procedure.

stat.ML

Beyond Global Divergences: A Local-Mass Perspective on Bayesian Inference

Global objectives, such as KL divergence and ELBO, are widely used in Bayesian inference for measuring distributional discrepancy. This paper studies their local-mass behaviour that is not directly captured by such objectives. We introduce and use two mathematical tools: (1) Mass Index for recording the polynomial and logarithmic decay scales of local mass, and (2) regularised extended KL (RE-KL), a set-localised divergence that can be formulated in the presence of singular components. Mass Indices help characterise how Bayesian updating changes local mass: (1) power-log likelihood factors shift it explicitly, and (2) parameter-dependent supports, or their smooth softenings, may change the local scale through the amount of mass that remains near the parameter value. Using local RE-KL, we prove absolute, relative, and directional inequalities for comparing local small-ball masses under the two KL directions. Together, these results provide a local theoretical account of local mass behaviour. Experiments provide controlled illustrations of the local behaviour. Code is available at https://github.com/Forsythia0604/Local-Mass-Framework.

stat.ML

Efficient Rare-Event Simulation for Random Geometric Graphs via Importance Sampling

Random geometric graphs defined on Euclidean subspaces, also called Gilbert graphs, are widely used to model spatially embedded networks across various domains. In such graphs, nodes are located at random in Euclidean space, and any two nodes are connected by an edge if they lie within a certain distance threshold. Accurately estimating rare-event probabilities related to key properties of these graphs, such as the number of edges and the size of the largest connected component, is important in the assessment of risk associated with catastrophic incidents, for example. However, this task is computationally challenging, especially for large networks. Importance sampling offers a viable solution by concentrating computational efforts on significant regions of the graph. This paper explores the application of an importance sampling method to estimate rare-event probabilities, highlighting its advantages in reducing variance and enhancing accuracy. Through asymptotic analysis and numerical studies, we demonstrate the effectiveness of our methodology, contributing to improved analysis of Gilbert graphs and showcasing the broader applicability of importance sampling in complex network analysis.

math.PR

Uniform Sampling of Proper Graph Colorings via Soft Coloring and Partial Rejection Sampling

We present a new algorithm for the exact uniform sampling of proper \(k\)-colorings of a graph on \(n\) vertices with maximum degree~\(Δ\). The algorithm is based on partial rejection sampling (PRS) and introduces a soft relaxation of the proper coloring constraint that is progressively tightened until an exact sample is obtained. Unlike coupling from the past (CFTP), the method is inherently parallelizable. We propose a hybrid variant that decomposes the global sampling problem into independent subproblems of size \(O(\log n)\), each solved by any existing exact sampler. This decomposition acts as a {\em complexity reducer}: it replaces the input size~\(n\) with \(O(\log n)\) in the component solver's runtime, so that any improvement in direct methods automatically yields a stronger result. Using an existing CFTP method as the component solver, this improves upon the best known exact sampling runtime for \(k>3Δ\). Recursive application of the hybrid drives the runtime to \(O(L^{\log^* n}\cdot nΔ)\), where \(L\) is the number of relaxation levels. We conjecture that \(L\) is bounded independently of~\(n\), which would yield a linear-time parallelizable algorithm for general graphs. Our simulations strongly support this conjecture.

cs.DS

Parsimonious Subset Selection for Generalized Linear Models with Biomedical Applications

High-dimensional biomedical studies require models that are simultaneously accurate, sparse, and interpretable, yet exact best subset selection for generalized linear models is computationally intractable. We develop a scalable method that combines a continuous Boolean relaxation of the subset problem with a Frank--Wolfe algorithm driven by envelope gradients. The resulting method, which we refer to as COMBSS-GLM, is simple to implement, requires one penalized generalized linear model fit per iteration, and produces sparse models along a model-size path. Theoretically, we identify a curvature-based parameter regime in which the relaxed objective is concave in the selection weights, implying that global minimizers occur at binary corners. Empirically, in logistic and multinomial simulations across low- and high-dimensional correlated settings, the proposed method consistently improves variable-selection quality relative to established penalised likelihood competitors while maintaining strong predictive performance. In biomedical applications, it recovers established loci in a binary-outcome rice genome-wide association study and achieves perfect multiclass test accuracy on the Khan SRBCT cancer dataset using a small subset of genes. Open-source implementations are available in R at https://github.com/benoit-liquet/COMBSS-GLM-R and in Python at https://github.com/saratmoka/COMBSS-GLM-Python.

stat.ME

A Scalable Gradient-Based Optimization Framework for Sparse Minimum-Variance Portfolio Selection

Portfolio optimization involves selecting asset weights to minimize a risk-reward objective, such as the portfolio variance in the classical minimum-variance framework. Sparse portfolio selection extends this by imposing a cardinality constraint: only $k$ assets from a universe of $p$ may be included. The standard approach models this problem as a mixed-integer quadratic program and relies on commercial solvers to find the optimal solution. However, the computational costs of such methods increase exponentially with $k$ and $p$, making them too slow for problems of even moderate size. We propose a fast and scalable gradient-based approach that transforms the combinatorial sparse selection problem into a constrained continuous optimization task via Boolean relaxation, while preserving equivalence with the original problem on the set of binary points. Our algorithm employs a tunable parameter that transmutes the auxiliary objective from a convex to a concave function. This allows a stable convex starting point, followed by a controlled path toward a sparse binary solution as the tuning parameter increases and the objective moves toward concavity. In practice, our method matches commercial solvers in asset selection for most instances and, in rare instances, the solution differs by a few assets whilst showing a negligible error in portfolio variance.

stat.ML

Rating Players of Counter-Strike: Global Offensive Based on Plus/Minus value

We propose a player rating mechanism for Counter-Strike: Global Offensive (CS ), a popular e-sport, by analyzing players' Plus/Minus values. The Plus/Minus value represents the average point difference between a player's team and the opponent's team across all matches the player has participated in. Using models such as regularized linear regression, logistic regression, and Bayesian linear models, we examine the relationship between player participation and team point differences. The most commonly used metric in the CS community is "Rating 2.0," which focuses solely on individual performance and does not account for indirect contributions to team success. Our approach introduces a new rating system that evaluates both direct and indirect contributions of players, prioritizing those who make a tangible impact on match outcomes rather than those with the highest individual scores. This rating system could help teams distribute rewards more fairly and improve player recruitment. We believe this methodology will positively influence not only the CS community but also the broader e-sports industry.

stat.AP

Continuous Optimization for Offline Change Point Detection and Estimation

This work explores use of novel advances in best subset selection for regression modelling via continuous optimization for offline change point detection and estimation in univariate Gaussian data sequences. The approach exploits reformulating the normal mean multiple change point model into a regularized statistical inverse problem enforcing sparsity. After introducing the problem statement, criteria and previous investigations via Lasso-regularization, the recently developed framework of continuous optimization for best subset selection (COMBSS) is briefly introduced and related to the problem at hand. Supervised and unsupervised perspectives are explored with the latter testing different approaches for the choice of regularization penalty parameters via the discrepancy principle and a confidence bound. The main result is an adaptation and evaluation of the COMBSS approach for offline normal mean multiple change-point detection via experimental results on simulated data for different choices of regularisation parameters. Results and future directions are discussed.

stat.ME

Group COMBSS: Group Selection via Continuous Optimization

We present a new optimization method for the group selection problem in linear regression. In this problem, predictors are assumed to have a natural group structure and the goal is to select a small set of groups that best fits the response. The incorporation of group structure in a predictor matrix is a key factor in obtaining better estimators and identifying associations between response and predictors. Such a discrete constrained problem is well-known to be hard, particularly in high-dimensional settings where the number of predictors is much larger than the number of observations. We propose to tackle this problem by framing the underlying discrete binary constrained problem into an unconstrained continuous optimization problem. The performance of our proposed approach is compared to state-of-the-art variable selection strategies on simulated data sets. We illustrate the effectiveness of our approach on a genetic dataset to identify grouping of markers across chromosomes.

stat.ME

Best Subset Solution Path for Linear Dimension Reduction Models using Continuous Optimization

The selection of best variables is a challenging problem in supervised and unsupervised learning, especially in high dimensional contexts where the number of variables is usually much larger than the number of observations. In this paper, we focus on two multivariate statistical methods: principal components analysis and partial least squares. Both approaches are popular linear dimension-reduction methods with numerous applications in several fields including in genomics, biology, environmental science, and engineering. In particular, these approaches build principal components, new variables that are combinations of all the original variables. A main drawback of principal components is the difficulty to interpret them when the number of variables is large. To define principal components from the most relevant variables, we propose to cast the best subset solution path method into principal component analysis and partial least square frameworks. We offer a new alternative by exploiting a continuous optimization algorithm for best subset solution path. Empirical studies show the efficacy of our approach for providing the best subset solution path. The usage of our algorithm is further exposed through the analysis of two real datasets. The first dataset is analyzed using the principle component analysis while the analysis of the second dataset is based on partial least square framework.

stat.ME

Spatial Autoregressive Model on a Dirichlet Distribution

Compositional data find broad application across diverse fields due to their efficacy in representing proportions or percentages of various components within a whole. Spatial dependencies often exist in compositional data, particularly when the data represents different land uses or ecological variables. Ignoring the spatial autocorrelations in modelling of compositional data may lead to incorrect estimates of parameters. Hence, it is essential to incorporate spatial information into the statistical analysis of compositional data to obtain accurate and reliable results. However, traditional statistical methods are not directly applicable to compositional data due to the correlation between its observations, which are constrained to lie on a simplex. To address this challenge, the Dirichlet distribution is commonly employed, as its support aligns with the nature of compositional vectors. Specifically, the R package DirichletReg provides a regression model, termed Dirichlet regression, tailored for compositional data. However, this model fails to account for spatial dependencies, thereby restricting its utility in spatial contexts. In this study, we introduce a novel spatial autoregressive Dirichlet regression model for compositional data, adeptly integrating spatial dependencies among observations. We construct a maximum likelihood estimator for a Dirichlet density function augmented with a spatial lag term. We compare this spatial autoregressive model with the same model without spatial lag, where we test both models on synthetic data as well as two real datasets, using different metrics. By considering the spatial relationships among observations, our model provides more accurate and reliable results for the analysis of compositional data. The model is further evaluated against a spatial multinomial regression model for compositional data, and their relative effectiveness is discussed.

stat.ME

COMBSS: Best Subset Selection via Continuous Optimization

The problem of best subset selection in linear regression is considered with the aim to find a fixed size subset of features that best fits the response. This is particularly challenging when the total available number of features is very large compared to the number of data samples. Existing optimal methods for solving this problem tend to be slow while fast methods tend to have low accuracy. Ideally, new methods perform best subset selection faster than existing optimal methods but with comparable accuracy, or, being more accurate than methods of comparable computational speed. Here, we propose a novel continuous optimization method that identifies a subset solution path, a small set of models of varying size, that consists of candidates for the single best subset of features, that is optimal in a specific sense in linear regression. Our method turns out to be fast, making the best subset selection possible when the number of features is well in excess of thousands. Because of the outstanding overall performance, framing the best subset selection challenge as a continuous optimization problem opens new research directions for feature extraction for a large variety of regression models.

stat.ME

Generalized Linear Models via the Lasso: To Scale or Not to Scale?

The Lasso regression is a popular regularization method for feature selection in statistics. Prior to computing the Lasso estimator in both linear and generalized linear models, it is common to conduct a preliminary rescaling of the feature matrix to ensure that all the features are standardized. Without this standardization, it is argued, the Lasso estimate will unfortunately depend on the units used to measure the features. We propose a new type of iterative rescaling of the features in the context of generalized linear models. Whilst existing Lasso algorithms perform a single scaling as a preprocessing step, the proposed rescaling is applied iteratively throughout the Lasso computation until convergence. We provide numerical examples, with both real and simulated data, illustrating that the proposed iterative rescaling can significantly improve the statistical performance of the Lasso estimator without incurring any significant additional computational cost.

stat.ME

Column Subset Selection and Nyström Approximation via Continuous Optimization

We propose a continuous optimization algorithm for the Column Subset Selection Problem (CSSP) and Nyström approximation. The CSSP and Nyström method construct low-rank approximations of matrices based on a predetermined subset of columns. It is well known that choosing the best column subset of size $k$ is a difficult combinatorial problem. In this work, we show how one can approximate the optimal solution by defining a penalized continuous loss function which is minimized via stochastic gradient descent. We show that the gradients of this loss function can be estimated efficiently using matrix-vector products with a data matrix $X$ in the case of the CSSP or a kernel matrix $K$ in the case of the Nyström approximation. We provide numerical results for a number of real datasets showing that this continuous optimization is competitive against existing methods.

stat.ME

Variance Reduction for Matrix Computations with Applications to Gaussian Processes

In addition to recent developments in computing speed and memory, methodological advances have contributed to significant gains in the performance of stochastic simulation. In this paper, we focus on variance reduction for matrix computations via matrix factorization. We provide insights into existing variance reduction methods for estimating the entries of large matrices. Popular methods do not exploit the reduction in variance that is possible when the matrix is factorized. We show how computing the square root factorization of the matrix can achieve in some important cases arbitrarily better stochastic performance. In addition, we propose a factorized estimator for the trace of a product of matrices and numerically demonstrate that the estimator can be up to 1,000 times more efficient on certain problems of estimating the log-likelihood of a Gaussian process. Additionally, we provide a new estimator of the log-determinant of a positive semi-definite matrix where the log-determinant is treated as a normalizing constant of a probability density.

stat.ML

Unbiased Estimation of the Reciprocal Mean for Non-negative Random Variables

Many simulation problems require the estimation of a ratio of two expectations. In recent years Monte Carlo estimators have been proposed that can estimate such ratios without bias. We investigate the theoretical properties of such estimators for the estimation of $β= 1/\mathbb{E}\, Z$, where $Z \geq 0$. The estimator, $\widehat β(w)$, is of the form $w/f_w(N) \prod_{i=1}^N (1 - w\, Z_i)$, where $w < 2β$ and $N$ is any random variable with probability mass function $f_w$ on the positive integers. For a fixed $w$, the optimal choice for $f_w$ is well understood, but less so the choice of $w$. We study the properties of $\widehat β(w)$ as a function of~$w$ and show that its expected time variance product decreases as $w$ decreases, even though the cost of constructing the estimator increases with $w$. We also show that the estimator is asymptotically equivalent to the maximum likelihood (biased) ratio estimator and establish practical confidence intervals.

math.ST