arXiv subjects

Saulius Juodkazis

Publications and source records attributed to Saulius Juodkazis.

At least 19 recordsLinked to original sources

arXiv2026

Heating of black-Si by microwaves at 2.45 GHz: effect of nano-needle orientation

Silicon, which is highly reflective and has negligible absorption at the microwave 2.45 GHz range, can be heated when it is turned into black-Si with a surface texture of nano-needles made by SF6/O2 plasma etching. Microwave heating of flat Si and of black-Si with vertical and with tilted (oriented) nano-needles was compared under identical conditions in a cylindrical TM010 resonator. Samples were placed horizontally on a 150-micrometer-thick cover glass, which standardized their height and position inside the cavity and allowed a common calibration of the radiation thermometer against a K-type thermocouple. Under a stepwise protocol of only 2-3-4 W of microwave power (60 s per step), black-Si with vertical needles reached ~ 260 C, systematically exceeding flat Si (~ 190 C), while black-Si with oriented needles showed a delayed but abrupt onset of heating at 3 W. In situ monitoring of the cavity resonance revealed a 2-3 MHz downshift of the resonance frequency f for all samples, with the drift consistently appearing once the sample temperature exceeded ~ 120 - 150 C, consistent with thermally activated carrier generation in Si. At a given temperature, each sample loads the cavity at a different f and quality factor Q, indicating an orientation-dependent effective permittivity of the nano-needle array, in line with the strong form birefringence of tilted black-Si. Application potential and challenges in the quantitative temperature and permittivity determination are discussed.

cond-mat.mes-hall↗

arXiv2026

Oxidation of Tantalum Nano-Film by Microwave Exposure

Oxidation and ablation of 200 nm tantalum films were carried out by three routes: (i) femtosecond (fs-)laser direct write, (ii) high-temperature annealing (HTA) in a tube furnace, and (iii) annealing in a 2.45 GHz microwave cavity. Complete conversion of the 200 nm Ta layer into 409 nm of Ta2O5 required one hour at 600 C in the furnace, but only minutes at ~ 50 W of microwave power. Fs-laser (515 nm/200 fs) oxidation of the Ta nano-film set in at an average single-pulse fluence of ~ 0.1 J/cm2 under strong pulse-to-pulse overlap (900 pulses per focal spot), i.e. within a narrow window bounded from above by the onset of ablation. Under microwave annealing, both the cavity resonance frequency and the quality factor Q changed markedly at the metal-to-oxide transition, reflecting the collapse of the real and imaginary parts of the permittivity at 2.45 GHz. This dielectric contrast turns the cavity into a sensor: the oxidation can be followed in real time from the shift of the cavity resonance, providing a non-invasive, in-situ diagnostic tool.

cond-mat.mtrl-sci↗

arXiv2026

Diamond membranes: platform for photonic and opto-mechanical applications

Diamond 1 - 10 micrometers thick membranes are platform for photonic, quantum and opto-mechanic devices with applications across UV-IR spectral ranges. IR characterization of diamond gratings in reflection and transmission showed a change of the IR absorbance dichroism between positive and negative when the grating period was 1-2 wavelengths (free space) including inside the region of the intrinsic diamond absorbance. Femtosecond laser cutting of micrometers-wide and mm-long structures are demonstrated by steps of carbonization > 0.4 J/cm2/pulse (1030 nm/200 fs) and oxidation of diamond membranes. Light intensity distribution inside form-birefringent diamond structure was modeled for a scaled-down structure and wavelength to reveal characteristic interference patterns for different polarizations.

physics.optics↗

arXiv2026

Deformation of Bacterial Cell Membranes by Action of Metal Surface under Plasmon Resonance Condition

This paper is devoted to studies of the mechanical deformation of the S. aureus cell wall. The bacterium is modelled as a thin elastic membrane containing cytoplasm, which is treated as an incompressible fluid. Deformation occurs via Van der Waals interactions between the bacterium and a solid metallic surface, both with and without the influence of surface plasmon resonance (SPR). Our modelling results indicate that the excitation of surface plasmons significantly increases the effective interaction area between the bacterial membrane and the nanostructured surface. The elastic and dielectric properties of the bacterium's components are uninvestigated. Therefore, theoretical calculations are performed in wide, physically meaningful ranges. Thus, the results of studies give only a qualitative estimation. However, they are novel and, with further experiments, can solve the inverse problem of obtaining physical properties. The paper highlights the potential of SPR to enhance antibacterial strategies, inspiring further research and innovation.

physics.bio-ph↗

arXiv2026

UV-enhanced SEM: towards orientation and electron work function imaging

Deep-UV ~ 250 nm (4.96 eV) tilted in-situ co-illumination of the sample under imaging by scanning electron microscope (SEM) is developed at a robust and practical instrument level. Precise mechanical control of the lateral position and tilt angle (within 6.5$^\circ$ from a 42$^\circ$ baseline) of the UV-C LED source is achieved using mechanisms external to the vacuum chamber. The incorporated linear polariser (for s-pol. mode illumination) with external polarisation plane adjustment allows for modulation and tuning of tangential $E^{(t)}$ and normal $E^{(n)}$ electric field components and their enhancement for controlled directional electron emission from the surface of the sample. Numerical modelling of E-field enhancement corroborates the expected enhancement in the production of secondary electrons. This modality of SEM imaging does not require metal coatings, preserving sample integrity for subsequent analysis. The feasibility of having linearly polarised incident UV-C light with azimuthal orientation control in $(s,p)$-plane is modeled and discussed.

physics.optics↗

arXiv2026

Olivine annealed up to 1500 C: changes traced by polarised IR reflectance and magnetization

Spectral analysis at the infrared (IR) spectral range is introduced with assignment of synthetic red-green-blue (RGB) colours defined by adjustable wavelength and bandwidth. The RGB bands were selected at the phase-specific absorbance A or reflectance R bands of olivine and related materials, which can be formed via high temperature annealing (HTA) of natural minerals up to 1500 C. Natural olivines were collected from quarry at volcanic site in Mortlake, Victoria, Australia and spectrally characterised during IR-THz spectroscopy beamtime experiments at Australian Synchrotron. Phase changes in HTA natural olivines were traced by correlation of optical IR 4-polarisation spectroscopy, X-ray energy dispersive spectroscopy and magnetisation. After HTA, olivine samples were magnetized via precipitation of Fe-rich oxides.

physics.geo-ph↗

arXiv2026

Nanoscale Surface Analysis of High Entropy Alloy

Nanoscale surface analysis of 1 micrometer thick high entropy alloys (HEAs) was carried out using nano-IR for hyperspectral imaging and single point spectroscopy in the 700-1700 1/cm spectral range. Nano-IR is based on the detection of scattered light from an oscillating metal coated nano-tip in one of the arms of the Fourier transform infrared spectrometer and has a resolution defined by the tip radius of the probe, 20 nm, regardless of the excitation wavelength. HEA CuPdAgPtAu showed an absorption and reflection increase at 900-1100 1/cm band, which is consistent with Drude-Lorenz modeling of permittivity, however, could also signify oxide formation as tested by X-ray photoelectron spectroscopy of CuPdAgPtAu and CrFeCoNiCuMo. Realization of polarization analysis for nano-IR nano-spectroscopy in the plane perpendicular to the sample's surface is discussed and modeled. The currently available modality of surface analysis with the excitation-detection mode of the p-pol. antenna can be extended to full 3D analysis of the orientational dependencies of local absorbance and refractive index.

physics.optics↗

arXiv2026

High Entropy Alloy under Shock Compression: Optical-Pump X-Ray-Probe

High entropy alloys (HEAs) are multi-principal-element alloys designed for tailorable mechanical performance and have been attracting significant engineering interest, yet their fundamental behaviour under extreme dynamic conditions, such as shock loading, remains unexplored. Here, we report laser-shock experiments on two different types of 1-micrometers-thick HEA microfilms, CuPdAgPtAu and CrFeCoNiCuMo, on 25-micrometers-thick black-Kapton ablator driven by a high intensity laser pulse (532 nm, 5 ns, 16 J, 0.5-mm diameter focal spot) and probed by an X-ray free electron laser (XFEL) pulse (12 keV, 7 fs). Time-resolved X-ray diffraction (XRD) shows the formation of a transient phase with a lattice compression up to 5.1% of the CuPdAgPtAu HEA along the (111) plane; this transient compressed phase existed for 0.3 ns. The impedance matching Hugoniot analysis estimated a shock pressure of 55 +/- 6 GPa in the HEA film, while Au- and Fe-based equations of state (EoS) modelling predict 80 GPa (0.8 MBar) at the free HEA surface. The free HEA surface reached maximum velocities of ~ 5 km/s as recorded from in situ monitoring with the velocity interferometry system for any reflector (VISAR) imaging. These initial HEA results show the suitability of HEA sample preparation and XFEL-based XRD characterisation under extreme shock loading, and are promising for experimental determination of the EoS of this emerging class of materials (beamtime proposal No.: 2024A8503 for a 6-hour preliminary experiment).

cond-mat.mtrl-sci↗

arXiv2026

Structure orientation determined in transmission and reflection: q-plate

Determination of orientation in the imaged sample/scene has a large application potential when the anisotropy of properties is analysed, usually, under a linearly polarised illumination. This study combined several improvements of microscopy imaging: use of an incoherent white illumination source (a lamp) with a spectral filter to define a spectral window, a plastic circular polariser to image with circularly polarised light (instead of linear), and a 4-pol. camera with integrated polarisers for simultaneous acquisition of images at four pi/4-azimuth shifts. In the transmission mode, a high-fidelity readout of form birefringent optical elements, q-plates, was achieved using a fitting procedure based on the analytical expression of S0 (intensity) Stokes parameters at the pixel level. In the reflection mode, the S0 fit was used to determine the azimuth orientation of the q-plates, as well as a generic Amp x cos(2Q1 - 2Q0) + Offset fit (at pixel level) applied to images taken at four Q1 azimuths. The 4-pol. analysis in reflection under circularly polarised illumination is discussed.

physics.optics↗

arXiv2026

Burst-mode fs-laser direct writing for full-thickness oxidation of Ta thin films

Direct fs-laser (1030~nm/200~fs) write of a throughout oxide Ta$_{2}$O$_{5}$ on a 200~nm Ta film was achieved using a combined ps- and ns- burst mode (Burst-in-Burst or BiB) of fs-pulse exposure at a high 0.6~MHz repetition rate. Few micrometers-wide lines were formed at the center of 12~$μ$m focal spot by controlled oxidation without ablation. The oxidized regions were flat and optically transparent. Wavelength-scale self-organized ripples of oxidized Ta$_{2}$O$_{5}$ sub-1~$μ$m gratings were recorded by rastering a $1\times 1$~mm$^2$ area. The oxidized ripples with periodic pattern $\sim wavelength$ were aligned with the polarization of the writing beam. Energy deposition in the burst-mode oxidation is discussed by comparing 200~fs and 20~ps BiB-mode writing modes. The presented strategy of self-guided oxidation with heat deposition by BiB fs-laser opens an opportunity for debris-free and annealing-free oxidation on a sub-wavelength scale.

physics.optics↗

arXiv2025

Ablation of black-Si by (Gauss-)Bessel femtosecond laser beams

Laser machining and modification of black-Si (b-Si) by femtosecond laser Gaussian (G-) and Gauss-Bessel (GB-) beams are compared at a wavelength of 1030 nm. The GB-beam was generated using a diffractive axicon lens and 10x demagnification optics. It was found that modification of b-Si well below (a factor 50x) the single pulse ablation fluence of 0.2 J/cm2 was possible, corresponding to ablation/melting of nano-needles. The width of modification was almost independent of pulse energy/fluence and had a width of 1/e2-intensity profile at the melting regime. For the GB-beam, the smallest width of laser modification at 0.2 J/cm2 threshold (at the center core) was close to the FWHM of the core of the GB-beam. The aspect ratio of the ablated groove on the surface of b-Si made by GB-beam was twice as large - up to 8 - compared to that achievable with G-beam, and it was at a lower fluence of 4 J/cm2 (50x reduction). Reflectivity of two-side nanotextured b-Si on plasma-thinned 70-micrometers thick Si was strongly reduced in the near-IR range, reaching transmittance >95% at 1.7-2.1 micrometres wavelengths.

physics.optics↗

arXiv2025

Anisotropy analysis of bamboo and tooth using 4-angle polarization micro-spectroscopy

To investigate the anisotropic properties of biomaterials, two distinct classes are considered: polymer-based (e.g., cellulose in plants) and crystalline-based (e.g., enamel in teeth), each demonstrating distinct structural and functional characteristics. Four-angle polarization (4-pol.) spectral mapping of sub-1 μm bamboo slices was carried out in the mid-IR spectral range (2.5-20 μm) to reveal the 3D organization of the chemical bonding of cellulose using the key characteristic absorption bands associated with C-O-C and C-N vibrational modes. The longitudinal and transverse microtome slices revealed a switch between the presence and absence of dichroism in parenchyma cell walls and vascular bundles. The cell wall showed continuous alignment of the C-O-C stretching vibrational mode (8.6 μm/1163 cm-1) down to the pixel resolution of ~ 4 μm (the step size in imaging) in the transverse slice; the cell wall thickness is ~ 1 μm. Thin microtomed slices of a tooth were measured in transmission and reflection modes. The single-point reflection measurements, performed using two perpendicular orientations, revealed orientational anisotropy in the enamel, which was absent in the dentin region. High sub-diffraction limited lateral resolution was numerically validated using a simplified-model of a Gaussian beam reading out material pixels with a defined orientation of absorption. It is shown that the orientation of small ~ λ/10 ~ 1 μm objects can be revealed using a focal spot of ~ λ/NA ~ 20 μm, defining the diffraction limit for the objective lens with a numerical aperture NA ~ 0.5.

physics.bio-ph↗

arXiv2025

Exploring Broad-Spectrum Antimicrobial Nanotopographies: Implications for Bactericidal, Antifungal, and Virucidal Surface Design

Inspired by the natural defence strategies of insect wings and plant leaves, nanostructured surfaces have emerged as a promising tool in various fields, including engineering, biomedical sciences, and materials science to combat bacterial contamination and disrupt biofilm formation. However, the development of effective antimicrobial surfaces against fungal and viral pathogens presents distinct challenges, necessitating tailored approaches. Here, we aimed to review the recent advancements of the use of nanostructured surfaces to combat microbial contamination, particularly focusing on their mechanobactericidal and antifungal properties, as well as their potential in mitigating viral transmission. We comparatively analysed the diverse geometries and nano-architectures of these surfaces and discussed their applications in various biomedical contexts, such as dental and orthopedic implants, drug delivery systems, and tissue engineering. Our review highlights the importance of preventing microbial attachment and biofilm formation, especially in the context of rising antimicrobial resistance and the economic impact of biofilms. We also discussed the latest progress in material science, particularly nanostructured surface engineering, as promising strategies for reducing viral transmission through surfaces. Overall, our findings underscore the significance of innovative strategies to mitigate microbial attachment and surface-mediated transmission, while also emphasizing the need for further interdisciplinary research in this area to optimize antimicrobial efficacy and address emerging challenges.

physics.bio-ph↗

arXiv2025

Bridging Spectroscopy and Advanced Molecular Orientation Analysis with New 4+ Angle Polarization Toolbox in Quasar

Anisotropy plays a critical role in governing the mechanical, thermal, electrical, magnetic, and optical properties of materials, influencing their behavior across diverse applications. Probing and quantifying this directional dependence is crucial for advancing materials science and biomedical research, as it provides a deeper understanding of structural orientations at the molecular level, encompassing both scientific and industrial benefits. This study introduces the "4+ Angle Polarization" widget, an innovative extension to the open-source Quasar platform (https://quasar.codes/), tailored for advanced multiple-angle polarization analysis. This toolbox enables precise molecular orientation analysis of complex microspectroscopic datasets through a streamlined workflow. Using polarized Fourier transform infrared (p-FTIR) spectroscopy, we demonstrate its versatility across various sample types, including polylactic acid (PLA) organic crystals, murine cortical bone, and human osteons. By overcoming the limitations of traditional two-angle methods, the widget significantly enhances the accuracy of structural and orientational analysis. This novel analytical tool expands the potential of multiple-angle p-FTIR techniques into advanced characterization of structural anisotropy in heterogeneous systems, providing transformative insights for materials characterization, biomedical imaging and beyond.

cond-mat.mtrl-sci↗

arXiv2024

3D Free-Form Optical Lens -- Miniaturised Fibre Couplers for Astrophotonics

In astronomy, multi-object spectrographs employ fibre positioning robots to couple the light from multiple astronomy sources (stars or galaxies) into multiple multi-mode fibres, which are distributed across the focal plane of the telescope. These fibres transport the celestial light to the entrance slit of a spectrograph (or bank of spectrographs) for analysis. For any multi-object system mm-scale opto-mechanical solutions are required to couple the telescope light efficiently into the fibre. We demonstrate a unique micro-optics solution to replace current optical fibre couplers. Specifically, we target technology on board the Keck telescope's FOBOS - Fibre-Optic Broadband Optical Spectrograph - which operates at UV to IR spectral ranges. For spectrally broad UV-IR band operation we use glass and crystals: fused silica, crystalline quartz (transparency 0.16 - 2 micrometers), sapphire Al2O3 (0.2 - 5 micrometers), CaF2 (0.2-7 micrometers), and BaF2 (0.2-10 micrometers). The miniaturised micro-coupler is monolithic, with the entire light path contained within glass or crystal, seamlessly extending to the fibre entrance, which is laser-machined and precisely aligned with the optical axis.

astro-ph.IM↗

arXiv2024

Laser writing and spin control of near infrared emitters in silicon carbide

Near infrared emission in silicon carbide is relevant for quantum technology specifically single photon emission and spin qubits for integrated quantum photonics, quantum communication and quantum sensing. In this paper we study the fluorescence emission of direct femtosecond laser written array of color centres in silicon carbide followed by thermal annealing. We show that in high energy laser writing pulses regions a near telecom O-band ensemble fluorescence emission is observed after thermal annealing and it is tentatively attributed to the nitrogen vacancy centre in silicon carbide. Further in the low energy laser irradiation spots after annealing, we fabricated few divacancy, PL5 and PL6 types and demonstrate their optical spin read-out, and coherent spin manipulation (Rabi and Ramsey oscillations and spin echo). We show that direct laser writing and thermal annealing can yield bright near telecom emission and preserve the spin coherence time of divacancy at room temperature.

cond-mat.mtrl-sci↗

arXiv2024

Formation of high-aspect-ratio nanocavity in LiF crystal using a femtosecond of x-ray FEL pulse

Sub-picosecond optical laser processing of metals is actively utilized for modification of a heated surface layer. But for deeper modification of different materials a laser in the hard x-ray range is required. Here, we demonstrate that a single 9-keV x-ray pulse from a free-electron laser can form a um-diameter cylindrical cavity with length of ~1 mm in LiF surrounded by shock-transformed material. The plasma-generated shock wave with TPa-level pressure results in damage, melting and polymorphic transformations of any material, including transparent and non-transparent to conventional optical lasers. Moreover, cylindrical shocks can be utilized to obtain a considerable amount of exotic high-pressure polymorphs. Pressure wave propagation in LiF, radial material flow, formation of cracks and voids are analyzed via continuum and atomistic simulations revealing a sequence of processes leading to the final structure with the long cavity. Similar results can be produced with semiconductors and ceramics, which opens a new pathway for development of laser material processing with hard x-ray pulses.

physics.plasm-ph↗

arXiv2024

Interferometric microscale measurement of refractive index at VIS and IR wavelengths

Determination of refractive index of micro-disks of a calcinated ($1100^\circ$C in air) photo-resist SZ2080$^\mathrm{TM}$ was carried out using transmission and reflection spectroscopy. Interference fringes at specific wavenumbers/wavelengths were selected for determination of the optical thickness, hence, the refractive index when the thickness of micro-disks was measured by scanning electron microscopy (SEM). Refractive index of disks of $\sim 6\pm 1~μ$m thickness were determined at visible and IR (2.5-13~$μ$m) spectral ranges and where $2.2\pm 0.2$ at visible and IR wavelengths. Peculiarities of optical characterisation of micro-optical structures are discussed in view of possible uncertainties in the definition of geometric parameters, shape and mass density redistribution.

physics.optics↗