arXiv subjects

Senja Pollak

Publications and source records attributed to Senja Pollak.

44 records · Page 3Linked to original sources

arXiv2020

COVID-19 therapy target discovery with context-aware literature mining

The abundance of literature related to the widespread COVID-19 pandemic is beyond manual inspection of a single expert. Development of systems, capable of automatically processing tens of thousands of scientific publications with the aim to enrich existing empirical evidence with literature-based associations is challenging and relevant. We propose a system for contextualization of empirical expression data by approximating relations between entities, for which representations were learned from one of the largest COVID-19-related literature corpora. In order to exploit a larger scientific context by transfer learning, we propose a novel embedding generation technique that leverages SciBERT language model pretrained on a large multi-domain corpus of scientific publications and fine-tuned for domain adaptation on the CORD-19 dataset. The conducted manual evaluation by the medical expert and the quantitative evaluation based on therapy targets identified in the related work suggest that the proposed method can be successfully employed for COVID-19 therapy target discovery and that it outperforms the baseline FastText method by a large margin.

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arXiv2020

CoSimLex: A Resource for Evaluating Graded Word Similarity in Context

State of the art natural language processing tools are built on context-dependent word embeddings, but no direct method for evaluating these representations currently exists. Standard tasks and datasets for intrinsic evaluation of embeddings are based on judgements of similarity, but ignore context; standard tasks for word sense disambiguation take account of context but do not provide continuous measures of meaning similarity. This paper describes an effort to build a new dataset, CoSimLex, intended to fill this gap. Building on the standard pairwise similarity task of SimLex-999, it provides context-dependent similarity measures; covers not only discrete differences in word sense but more subtle, graded changes in meaning; and covers not only a well-resourced language (English) but a number of less-resourced languages. We define the task and evaluation metrics, outline the dataset collection methodology, and describe the status of the dataset so far.

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arXiv2020

Emotion Recognition in Low-Resource Settings: An Evaluation of Automatic Feature Selection Methods

Research in automatic affect recognition has seldom addressed the issue of computational resource utilization. With the advent of ambient intelligence technology which employs a variety of low-power, resource-constrained devices, this issue is increasingly gaining interest. This is especially the case in the context of health and elderly care technologies, where interventions may rely on monitoring of emotional status to provide support or alert carers as appropriate. This paper focuses on emotion recognition from speech data, in settings where it is desirable to minimize memory and computational requirements. Reducing the number of features for inductive inference is a route towards this goal. In this study, we evaluate three different state-of-the-art feature selection methods: Infinite Latent Feature Selection (ILFS), ReliefF and Fisher (generalized Fisher score), and compare them to our recently proposed feature selection method named `Active Feature Selection' (AFS). The evaluation is performed on three emotion recognition data sets (EmoDB, SAVEE and EMOVO) using two standard acoustic paralinguistic feature sets (i.e. eGeMAPs and emobase). The results show that similar or better accuracy can be achieved using subsets of features substantially smaller than the entire feature set. A machine learning model trained on a smaller feature set will reduce the memory and computational resources of an emotion recognition system which can result in lowering the barriers for use of health monitoring technology.

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arXiv2020

AttViz: Online exploration of self-attention for transparent neural language modeling

Neural language models are becoming the prevailing methodology for the tasks of query answering, text classification, disambiguation, completion and translation. Commonly comprised of hundreds of millions of parameters, these neural network models offer state-of-the-art performance at the cost of interpretability; humans are no longer capable of tracing and understanding how decisions are being made. The attention mechanism, introduced initially for the task of translation, has been successfully adopted for other language-related tasks. We propose AttViz, an online toolkit for exploration of self-attention---real values associated with individual text tokens. We show how existing deep learning pipelines can produce outputs suitable for AttViz, offering novel visualizations of the attention heads and their aggregations with minimal effort, online. We show on examples of news segments how the proposed system can be used to inspect and potentially better understand what a model has learned (or emphasized).

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arXiv2020

tax2vec: Constructing Interpretable Features from Taxonomies for Short Text Classification

The use of background knowledge is largely unexploited in text classification tasks. This paper explores word taxonomies as means for constructing new semantic features, which may improve the performance and robustness of the learned classifiers. We propose tax2vec, a parallel algorithm for constructing taxonomy-based features, and demonstrate its use on six short text classification problems: prediction of gender, personality type, age, news topics, drug side effects and drug effectiveness. The constructed semantic features, in combination with fast linear classifiers, tested against strong baselines such as hierarchical attention neural networks, achieves comparable classification results on short text documents. The algorithm's performance is also tested in a few-shot learning setting, indicating that the inclusion of semantic features can improve the performance in data-scarce situations. The tax2vec capability to extract corpus-specific semantic keywords is also demonstrated. Finally, we investigate the semantic space of potential features, where we observe a similarity with the well known Zipf's law.

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arXiv2020

Leveraging Contextual Embeddings for Detecting Diachronic Semantic Shift

We propose a new method that leverages contextual embeddings for the task of diachronic semantic shift detection by generating time specific word representations from BERT embeddings. The results of our experiments in the domain specific LiverpoolFC corpus suggest that the proposed method has performance comparable to the current state-of-the-art without requiring any time consuming domain adaptation on large corpora. The results on the newly created Brexit news corpus suggest that the method can be successfully used for the detection of a short-term yearly semantic shift. And lastly, the model also shows promising results in a multilingual settings, where the task was to detect differences and similarities between diachronic semantic shifts in different languages.

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arXiv2019

Language comparison via network topology

Modeling relations between languages can offer understanding of language characteristics and uncover similarities and differences between languages. Automated methods applied to large textual corpora can be seen as opportunities for novel statistical studies of language development over time, as well as for improving cross-lingual natural language processing techniques. In this work, we first propose how to represent textual data as a directed, weighted network by the text2net algorithm. We next explore how various fast, network-topological metrics, such as network community structure, can be used for cross-lingual comparisons. In our experiments, we employ eight different network topology metrics, and empirically showcase on a parallel corpus, how the methods can be used for modeling the relations between nine selected languages. We demonstrate that the proposed method scales to large corpora consisting of hundreds of thousands of aligned sentences on an of-the-shelf laptop. We observe that on the one hand properties such as communities, capture some of the known differences between the languages, while others can be seen as novel opportunities for linguistic studies.

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arXiv2019

RaKUn: Rank-based Keyword extraction via Unsupervised learning and Meta vertex aggregation

Keyword extraction is used for summarizing the content of a document and supports efficient document retrieval, and is as such an indispensable part of modern text-based systems. We explore how load centrality, a graph-theoretic measure applied to graphs derived from a given text can be used to efficiently identify and rank keywords. Introducing meta vertices (aggregates of existing vertices) and systematic redundancy filters, the proposed method performs on par with state-of-the-art for the keyword extraction task on 14 diverse datasets. The proposed method is unsupervised, interpretable and can also be used for document visualization.

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