arXiv subjects

Serena Yeung

Publications and source records attributed to Serena Yeung.

At least 37 records · Page 2Linked to original sources

arXiv2021

FlowVOS: Weakly-Supervised Visual Warping for Detail-Preserving and Temporally Consistent Single-Shot Video Object Segmentation

We consider the task of semi-supervised video object segmentation (VOS). Our approach mitigates shortcomings in previous VOS work by addressing detail preservation and temporal consistency using visual warping. In contrast to prior work that uses full optical flow, we introduce a new foreground-targeted visual warping approach that learns flow fields from VOS data. We train a flow module to capture detailed motion between frames using two weakly-supervised losses. Our object-focused approach of warping previous foreground object masks to their positions in the target frame enables detailed mask refinement with fast runtimes without using extra flow supervision. It can also be integrated directly into state-of-the-art segmentation networks. On the DAVIS17 and YouTubeVOS benchmarks, we outperform state-of-the-art offline methods that do not use extra data, as well as many online methods that use extra data. Qualitatively, we also show our approach produces segmentations with high detail and temporal consistency.

cs.CV↗

arXiv2021

Capturing implicit hierarchical structure in 3D biomedical images with self-supervised hyperbolic representations

We consider the task of representation learning for unsupervised segmentation of 3D voxel-grid biomedical images. We show that models that capture implicit hierarchical relationships between subvolumes are better suited for this task. To that end, we consider encoder-decoder architectures with a hyperbolic latent space, to explicitly capture hierarchical relationships present in subvolumes of the data. We propose utilizing a 3D hyperbolic variational autoencoder with a novel gyroplane convolutional layer to map from the embedding space back to 3D images. To capture these relationships, we introduce an essential self-supervised loss -- in addition to the standard VAE loss -- which infers approximate hierarchies and encourages implicitly related subvolumes to be mapped closer in the embedding space. We present experiments on both synthetic data and biomedical data to validate our hypothesis.

cs.CV↗

arXiv2021

Staying in Shape: Learning Invariant Shape Representations using Contrastive Learning

Creating representations of shapes that are invari-ant to isometric or almost-isometric transforma-tions has long been an area of interest in shape anal-ysis, since enforcing invariance allows the learningof more effective and robust shape representations.Most existing invariant shape representations arehandcrafted, and previous work on learning shaperepresentations do not focus on producing invariantrepresentations. To solve the problem of learningunsupervised invariant shape representations, weuse contrastive learning, which produces discrimi-native representations through learning invarianceto user-specified data augmentations. To producerepresentations that are specifically isometry andalmost-isometry invariant, we propose new dataaugmentations that randomly sample these transfor-mations. We show experimentally that our methodoutperforms previous unsupervised learning ap-proaches in both effectiveness and robustness.

cs.CV↗

arXiv2021

Holistic 3D Human and Scene Mesh Estimation from Single View Images

The 3D world limits the human body pose and the human body pose conveys information about the surrounding objects. Indeed, from a single image of a person placed in an indoor scene, we as humans are adept at resolving ambiguities of the human pose and room layout through our knowledge of the physical laws and prior perception of the plausible object and human poses. However, few computer vision models fully leverage this fact. In this work, we propose an end-to-end trainable model that perceives the 3D scene from a single RGB image, estimates the camera pose and the room layout, and reconstructs both human body and object meshes. By imposing a set of comprehensive and sophisticated losses on all aspects of the estimations, we show that our model outperforms existing human body mesh methods and indoor scene reconstruction methods. To the best of our knowledge, this is the first model that outputs both object and human predictions at the mesh level, and performs joint optimization on the scene and human poses.

cs.CV↗

arXiv2021

DARCNN: Domain Adaptive Region-based Convolutional Neural Network for Unsupervised Instance Segmentation in Biomedical Images

In the biomedical domain, there is an abundance of dense, complex data where objects of interest may be challenging to detect or constrained by limits of human knowledge. Labelled domain specific datasets for supervised tasks are often expensive to obtain, and furthermore discovery of novel distinct objects may be desirable for unbiased scientific discovery. Therefore, we propose leveraging the wealth of annotations in benchmark computer vision datasets to conduct unsupervised instance segmentation for diverse biomedical datasets. The key obstacle is thus overcoming the large domain shift from common to biomedical images. We propose a Domain Adaptive Region-based Convolutional Neural Network (DARCNN), that adapts knowledge of object definition from COCO, a large labelled vision dataset, to multiple biomedical datasets. We introduce a domain separation module, a self-supervised representation consistency loss, and an augmented pseudo-labelling stage within DARCNN to effectively perform domain adaptation across such large domain shifts. We showcase DARCNN's performance for unsupervised instance segmentation on numerous biomedical datasets.

cs.CV↗

arXiv2021

Unsupervised Discovery of the Long-Tail in Instance Segmentation Using Hierarchical Self-Supervision

Instance segmentation is an active topic in computer vision that is usually solved by using supervised learning approaches over very large datasets composed of object level masks. Obtaining such a dataset for any new domain can be very expensive and time-consuming. In addition, models trained on certain annotated categories do not generalize well to unseen objects. The goal of this paper is to propose a method that can perform unsupervised discovery of long-tail categories in instance segmentation, through learning instance embeddings of masked regions. Leveraging rich relationship and hierarchical structure between objects in the images, we propose self-supervised losses for learning mask embeddings. Trained on COCO dataset without additional annotations of the long-tail objects, our model is able to discover novel and more fine-grained objects than the common categories in COCO. We show that the model achieves competitive quantitative results on LVIS as compared to the supervised and partially supervised methods.

cs.CV↗

arXiv2021

Medical symptom recognition from patient text: An active learning approach for long-tailed multilabel distributions

We study the problem of medical symptoms recognition from patient text, for the purposes of gathering pertinent information from the patient (known as history-taking). A typical patient text is often descriptive of the symptoms the patient is experiencing and a single instance of such a text can be "labeled" with multiple symptoms. This makes learning a medical symptoms recognizer challenging on account of i) the lack of availability of voluminous annotated data as well as ii) the large unknown universe of multiple symptoms that a single text can map to. Furthermore, patient text is often characterized by a long tail in the data (i.e., some labels/symptoms occur more frequently than others for e.g "fever" vs "hematochezia"). In this paper, we introduce an active learning method that leverages underlying structure of a continually refined, learned latent space to select the most informative examples to label. This enables the selection of the most informative examples that progressively increases the coverage on the universe of symptoms via the learned model, despite the long tail in data distribution.

cs.CL↗

arXiv2021

Personalized Federated Learning with First Order Model Optimization

While federated learning traditionally aims to train a single global model across decentralized local datasets, one model may not always be ideal for all participating clients. Here we propose an alternative, where each client only federates with other relevant clients to obtain a stronger model per client-specific objectives. To achieve this personalization, rather than computing a single model average with constant weights for the entire federation as in traditional FL, we efficiently calculate optimal weighted model combinations for each client, based on figuring out how much a client can benefit from another's model. We do not assume knowledge of any underlying data distributions or client similarities, and allow each client to optimize for arbitrary target distributions of interest, enabling greater flexibility for personalization. We evaluate and characterize our method on a variety of federated settings, datasets, and degrees of local data heterogeneity. Our method outperforms existing alternatives, while also enabling new features for personalized FL such as transfer outside of local data distributions.

cs.LG↗

arXiv2020

Using Computer Vision to Automate Hand Detection and Tracking of Surgeon Movements in Videos of Open Surgery

Open, or non-laparoscopic surgery, represents the vast majority of all operating room procedures, but few tools exist to objectively evaluate these techniques at scale. Current efforts involve human expert-based visual assessment. We leverage advances in computer vision to introduce an automated approach to video analysis of surgical execution. A state-of-the-art convolutional neural network architecture for object detection was used to detect operating hands in open surgery videos. Automated assessment was expanded by combining model predictions with a fast object tracker to enable surgeon-specific hand tracking. To train our model, we used publicly available videos of open surgery from YouTube and annotated these with spatial bounding boxes of operating hands. Our model's spatial detections of operating hands significantly outperforms the detections achieved using pre-existing hand-detection datasets, and allow for insights into intra-operative movement patterns and economy of motion.

cs.CV↗

arXiv2020

Rapidly Personalizing Mobile Health Treatment Policies with Limited Data

In mobile health (mHealth), reinforcement learning algorithms that adapt to one's context without learning personalized policies might fail to distinguish between the needs of individuals. Yet the high amount of noise due to the in situ delivery of mHealth interventions can cripple the ability of an algorithm to learn when given access to only a single user's data, making personalization challenging. We present IntelligentPooling, which learns personalized policies via an adaptive, principled use of other users' data. We show that IntelligentPooling achieves an average of 26% lower regret than state-of-the-art across all generative models. Additionally, we inspect the behavior of this approach in a live clinical trial, demonstrating its ability to learn from even a small group of users.

cs.LG↗

arXiv2019

Adversarial Representation Active Learning

Active learning aims to develop label-efficient algorithms by querying the most informative samples to be labeled by an oracle. The design of efficient training methods that require fewer labels is an important research direction that allows more effective use of computational and human resources for labeling and training deep neural networks. In this work, we demonstrate how we can use recent advances in deep generative models, to outperform the state-of-the-art in achieving the highest classification accuracy using as few labels as possible. Unlike previous approaches, our approach uses not only labeled images to train the classifier but also unlabeled images and generated images for co-training the whole model. Our experiments show that the proposed method significantly outperforms existing approaches in active learning on a wide range of datasets (MNIST, CIFAR-10, SVHN, CelebA, and ImageNet).

cs.CV↗

arXiv2018

Faster CryptoNets: Leveraging Sparsity for Real-World Encrypted Inference

Homomorphic encryption enables arbitrary computation over data while it remains encrypted. This privacy-preserving feature is attractive for machine learning, but requires significant computational time due to the large overhead of the encryption scheme. We present Faster CryptoNets, a method for efficient encrypted inference using neural networks. We develop a pruning and quantization approach that leverages sparse representations in the underlying cryptosystem to accelerate inference. We derive an optimal approximation for popular activation functions that achieves maximally-sparse encodings and minimizes approximation error. We also show how privacy-safe training techniques can be used to reduce the overhead of encrypted inference for real-world datasets by leveraging transfer learning and differential privacy. Our experiments show that our method maintains competitive accuracy and achieves a significant speedup over previous methods. This work increases the viability of deep learning systems that use homomorphic encryption to protect user privacy.

cs.CR↗

arXiv2018

Tool Detection and Operative Skill Assessment in Surgical Videos Using Region-Based Convolutional Neural Networks

Five billion people in the world lack access to quality surgical care. Surgeon skill varies dramatically, and many surgical patients suffer complications and avoidable harm. Improving surgical training and feedback would help to reduce the rate of complications, half of which have been shown to be preventable. To do this, it is essential to assess operative skill, a process that currently requires experts and is manual, time consuming, and subjective. In this work, we introduce an approach to automatically assess surgeon performance by tracking and analyzing tool movements in surgical videos, leveraging region-based convolutional neural networks. In order to study this problem, we also introduce a new dataset, m2cai16-tool-locations, which extends the m2cai16-tool dataset with spatial bounds of tools. While previous methods have addressed tool presence detection, ours is the first to not only detect presence but also spatially localize surgical tools in real-world laparoscopic surgical videos. We show that our method both effectively detects the spatial bounds of tools as well as significantly outperforms existing methods on tool presence detection. We further demonstrate the ability of our method to assess surgical quality through analysis of tool usage patterns, movement range, and economy of motion.

cs.CV↗

arXiv2018

Towards Vision-Based Smart Hospitals: A System for Tracking and Monitoring Hand Hygiene Compliance

One in twenty-five patients admitted to a hospital will suffer from a hospital acquired infection. If we can intelligently track healthcare staff, patients, and visitors, we can better understand the sources of such infections. We envision a smart hospital capable of increasing operational efficiency and improving patient care with less spending. In this paper, we propose a non-intrusive vision-based system for tracking people's activity in hospitals. We evaluate our method for the problem of measuring hand hygiene compliance. Empirically, our method outperforms existing solutions such as proximity-based techniques and covert in-person observational studies. We present intuitive, qualitative results that analyze human movement patterns and conduct spatial analytics which convey our method's interpretability. This work is a step towards a computer-vision based smart hospital and demonstrates promising results for reducing hospital acquired infections.

cs.CV↗

arXiv2017

Tackling Over-pruning in Variational Autoencoders

Variational autoencoders (VAE) are directed generative models that learn factorial latent variables. As noted by Burda et al. (2015), these models exhibit the problem of factor over-pruning where a significant number of stochastic factors fail to learn anything and become inactive. This can limit their modeling power and their ability to learn diverse and meaningful latent representations. In this paper, we evaluate several methods to address this problem and propose a more effective model-based approach called the epitomic variational autoencoder (eVAE). The so-called epitomes of this model are groups of mutually exclusive latent factors that compete to explain the data. This approach helps prevent inactive units since each group is pressured to explain the data. We compare the approaches with qualitative and quantitative results on MNIST and TFD datasets. Our results show that eVAE makes efficient use of model capacity and generalizes better than VAE.

cs.LG↗

arXiv2017

Every Moment Counts: Dense Detailed Labeling of Actions in Complex Videos

Every moment counts in action recognition. A comprehensive understanding of human activity in video requires labeling every frame according to the actions occurring, placing multiple labels densely over a video sequence. To study this problem we extend the existing THUMOS dataset and introduce MultiTHUMOS, a new dataset of dense labels over unconstrained internet videos. Modeling multiple, dense labels benefits from temporal relations within and across classes. We define a novel variant of long short-term memory (LSTM) deep networks for modeling these temporal relations via multiple input and output connections. We show that this model improves action labeling accuracy and further enables deeper understanding tasks ranging from structured retrieval to action prediction.

cs.CV↗

arXiv2017

Learning to Learn from Noisy Web Videos

Understanding the simultaneously very diverse and intricately fine-grained set of possible human actions is a critical open problem in computer vision. Manually labeling training videos is feasible for some action classes but doesn't scale to the full long-tailed distribution of actions. A promising way to address this is to leverage noisy data from web queries to learn new actions, using semi-supervised or "webly-supervised" approaches. However, these methods typically do not learn domain-specific knowledge, or rely on iterative hand-tuned data labeling policies. In this work, we instead propose a reinforcement learning-based formulation for selecting the right examples for training a classifier from noisy web search results. Our method uses Q-learning to learn a data labeling policy on a small labeled training dataset, and then uses this to automatically label noisy web data for new visual concepts. Experiments on the challenging Sports-1M action recognition benchmark as well as on additional fine-grained and newly emerging action classes demonstrate that our method is able to learn good labeling policies for noisy data and use this to learn accurate visual concept classifiers.

cs.CV↗

arXiv2017

End-to-end Learning of Action Detection from Frame Glimpses in Videos

In this work we introduce a fully end-to-end approach for action detection in videos that learns to directly predict the temporal bounds of actions. Our intuition is that the process of detecting actions is naturally one of observation and refinement: observing moments in video, and refining hypotheses about when an action is occurring. Based on this insight, we formulate our model as a recurrent neural network-based agent that interacts with a video over time. The agent observes video frames and decides both where to look next and when to emit a prediction. Since backpropagation is not adequate in this non-differentiable setting, we use REINFORCE to learn the agent's decision policy. Our model achieves state-of-the-art results on the THUMOS'14 and ActivityNet datasets while observing only a fraction (2% or less) of the video frames.

cs.CV↗