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Serif Yesil

Publications and source records attributed to Serif Yesil.

3 recordsLinked to original sources

Efficient parallel implementation of the multiplicative weight update method for graph-based linear programs

Positive linear programs (LPs) model many graph and operations research problems. One can solve for a $(1+\epsilon)$-approximation for positive LPs, for any selected $\epsilon$, in polylogarithmic depth and near-linear work via variations of the multiplicative weight update (MWU) method. Despite extensive theoretical work on these algorithms through the decades, their empirical performance is not well understood. In this work, we implement and test an efficient parallel algorithm for solving positive LP relaxations, and apply it to graph problems such as densest subgraph, bipartite matching, vertex cover and dominating set. We accelerate the algorithm via a new step size search heuristic. Our implementation uses sparse linear algebra optimization techniques such as fusion of vector operations and use of sparse format. Furthermore, we devise an implicit representation for graph incidence constraints. We demonstrate the parallel scalability with the use of threading OpenMP and MPI on the Stampede2 supercomputer. We compare this implementation with exact libraries and specialized libraries for the above problems in order to evaluate MWU's practical standing for both accuracy and performance among other methods. Our results show this implementation is faster than general purpose LP solvers (IBM CPLEX, Gurobi) in all of our experiments, and in some instances, outperforms state-of-the-art specialized parallel graph algorithms.

cs.DC

SENSEi: Input-Sensitive Compilation for Accelerating GNNs

Over the years, many frameworks and optimization techniques have been proposed to accelerate graph neural networks (GNNs). Compared to the optimizations explored in these systems, we observe that different matrix re-associations of GNN computations lead to novel input-sensitive performance behavior. We leverage this observation to propose SENSEi, a system that exposes different sparse and dense matrix primitive compositions based on different matrix re-associations of GNN computations and selects the best among them based on input attributes. SENSEi executes in two stages: (1) an offline compilation stage that enumerates all valid re-associations leading to different sparse-dense matrix compositions and uses input-oblivious pruning techniques to prune away clearly unprofitable candidates and (2) an online runtime system that explores the remaining candidates and uses light-weight cost models to select the best re-association based on the input graph and the embedding sizes on a given hardware platform. On a wide range of configurations, SENSEi achieves speedups of up to $2.012\times$ and $1.85\times$ on graph convolutional networks and up to $6.294\times$ and $16.274\times$ on graph attention networks, on GPUs and CPUs respectively. We also show that its technique generalizes to GNN variants, including those that require sampling. Furthermore, we show that SENSEi's techniques are agnostic to the underlying GNN system, and can be used to yield synergistic improvements across a diverse set of implementations.

cs.LG

On Dynamic Precision Scaling

Based on the observation that application phases exhibit varying degrees of sensitivity to noise (i.e., accuracy loss) in computation during execution, this paper explores how Dynamic Precision Scaling (DPS) can maximize power efficiency by tailoring the precision of computation adaptively to temporal changes in algorithmic noise tolerance. DPS can decrease the arithmetic precision of noise-tolerant phases to result in power savings at the same operating speed (or faster execution within the same power budget), while keeping the overall loss in accuracy due to precision reduction bounded.

cs.DC