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Serkan Hoşten

Publications and source records attributed to Serkan Hoşten.

18 recordsLinked to original sources

Euclidean Distance Optimization Within the Grassmannian

Given a subvariety of the Grassmannian and a data point, we seek to find a point on the subvariety minimizing the Euclidean distance to the data point. The number of complex critical points of this optimization problem is the Euclidean distance (ED) degree. We show that the ED discriminant of the whole Grassmannian, that is, the set of data points with a number of critical points different than the ED degree, is the discriminant of the characteristic polynomial of the data as a projection matrix. Another closely connected algebraic complexity measure for a subvariety in the Grassmannian is the Grassmann distance (GD) degree, which is the number of complex critical points of the distance optimization problem when the data point itself is in the Grassmannian. We give formulae for ED and GD degrees of geometrically meaningful subvarieties of the Grassmannian, namely, products of smaller Grassmannians, matroid realization varieties, and Schubert varieties.

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Uniqueness of size-2 positive semidefinite matrix factorizations

We characterize when a size-2 positive semidefinite (psd) factorization of a positive matrix of rank 3 and psd rank 2 is unique. The characterization is obtained using tools from rigidity theory. In the first step, we define s-infinitesimally rigid psd factorizations and characterize 1- and 2-infinitesimally rigid size-2 psd factorizations. In the second step, we connect 1- and 2-infinitesimal rigidity of size-2 psd factorizations to uniqueness via global rigidity. We also prove necessary conditions on a positive matrix of rank 3 and psd rank 2 to be on the topological boundary of all nonnegative matrices with the same rank conditions.

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Equations of Tree Tensor Network Varieties

We show that tree tensor network varieties, including tensor train varieties, are general Markov models associated to spaced trees. This allows us to prove that the prime ideals of these varieties are generated by minors of matrix flattenings. In the case of tensor train varieties, we discuss whether these minors form a Gröbner basis and provide a combinatorial method to compute the degree for order $3$ tensor trains.

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Numerical Algebraic Geometry for Energy Computations on Tensor Train Varieties

We study energy minimization problems in quantum chemistry through the lens of computational algebraic geometry. We focus on minimizing the Rayleigh quotient of a Hamiltonian over a tensor train variety. The complex critical points of this problem approximate eigenstates of the quantum system, with the global minimum approximating the ground state. We call the number of critical points the Rayleigh-Ritz degree. We first study the Rayleigh-Ritz degree and introduce the Rayleigh-Ritz discriminant, which describes Hamiltonians that lead to a deficient number of critical points. We then specialize this framework to tensor train varieties: we identify instances when they are Segre products of projective spaces, report what we know about their defining ideals, and present a birational parametrization from products of Grassmannians. We use homotopy continuation to compute all critical points of this optimization problem over various tensor train and determinantal varieties. Finally, we use these results to benchmark state-of-the-art methods, the Alternating Linear Scheme and Density Matrix Renormalization Group.

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The Euler Stratification for $\mathbb{P}^1 \times \mathbb{P}^1 \times \mathbb{P}^n$

We study the Euler characteristic of a hypersurface in $(\mathbb{C}^*)^2 \times (\mathbb{C}^*)^n$ defined by a polynomial whose monomial support corresponds to lattice points in $Δ_1 \times Δ_1 \times Δ_n$ as the coefficients of the defining polynomial vary. Each member of this hypersurface family corresponds to a three-way independence model from algebraic statistics, and the (signed) Euler characteristic is equal to the maximum likelihood degree (ML degree) of the model. We show in the case of $Δ_1 \times Δ_1 \times Δ_1$ this Euler characteristic depends only on the vanishing patterns of the factors of the principal $A$-determinant, but this fails for $Δ_1 \times Δ_1 \times Δ_n$ with $n \geq 2$. We prove that, for all $n\geq 1$, all positive integers up to the maximum possible ML degree can be realized as the Euler characteristic. Furthermore, we completely determine the Euler stratification for $\mathbb{P}^1 \times \mathbb{P}^1 \times \mathbb{P}^1$ and provide partial information for $\mathbb{P}^1 \times \mathbb{P}^1 \times \mathbb{P}^2$.

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Grassmann and Flag Varieties in Linear Algebra, Optimization, and Statistics: An Algebraic Perspective

Grassmann and flag varieties lead many lives in pure and applied mathematics. Here we focus on the algebraic complexity of solving various problems in linear algebra and statistics as optimization problems over these varieties. The measure of the algebraic complexity is the amount of complex critical points of the corresponding optimization problem. After an exposition of different realizations of these manifolds as algebraic varieties we present a sample of optimization problems over them and we compute their algebraic complexity.

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Tropical toric maximum likelihood estimation

We consider toric maximum likelihood estimation over the field of Puiseux series and study critical points of the likelihood function using tropical methods. This problem translates to finding the intersection points of a tropical affine space with a classical linear subspace. We derive new structural results on tropical affine spaces and use these to give a complete and explicit description of the tropical critical points in certain cases. In these cases, we associate tropical critical points to the simplices in a regular triangulation of the polytope giving rise to the toric model.

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An Early History of Toric Ideals

Toric ideals are everywhere. They have been in the commutative algebra lexicon since about 1990 when Bernd Sturmfels used the term. The early days of toric ideals and their Gröbner bases were full of new results and promising developments in their applications. Bernd has been consistently their biggest promoter through his own work and that of his collaborators and students. This article is a personal and subjective recalling of the first decade of toric ideals when Bernd played a central role.

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Degrees of the Wasserstein Distance to Small Toric Models

The study of the closest point(s) on a statistical model from a given distribution in the probability simplex with respect to a fixed Wasserstein metric gives rise to a polyhedral norm distance optimization problem. There are two components to the complexity of determining the Wasserstein distance from a data point to a model. One is the combinatorial complexity that is governed by the combinatorics of the Lipschitz polytope of the finite metric to be used. Another is the algebraic complexity, which is governed by the polar degrees of the Zariski closure of the model. We find formulas for the polar degrees of rational normal scrolls and graphical models whose underlying graphs are star trees. Also, the polar degrees of the graphical models with four binary random variables where the graphs are a path on four vertices and the four-cycle, as well as for small, no-three-way interaction models, were computed. We investigate the algebraic degree of computing the Wasserstein distance to a small subset of these models. It was observed that this algebraic degree is typically smaller than the corresponding polar degree.

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Matroid Stratification of ML Degrees of Independence Models

We study the maximum likelihood (ML) degree of discrete exponential independence models and models defined by the second hypersimplex. For models with two independent variables, we show that the ML degree is an invariant of a matroid associated to the model. We use this description to explore ML degrees via hyperplane arrangements. For independence models with more variables, we investigate the connection between the vanishing of factors of its principal $A$-determinant and its ML degree. Similarly, for models defined by the second hypersimplex, we determine its principal $A$-determinant and give computational evidence towards a conjectured lower bound of its ML degree.

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Maximum information divergence from linear and toric models

We study the problem of maximizing information divergence from a new perspective using logarithmic Voronoi polytopes. We show that for linear models, the maximum is always achieved at the boundary of the probability simplex. For toric models, we present an algorithm that combines the combinatorics of the chamber complex with numerical algebraic geometry. We pay special attention to reducible models and models of maximum likelihood degree one.

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Logarithmic Voronoi Cells for Gaussian Models

We extend the theory of logarithmic Voronoi cells to Gaussian statistical models. In general, a logarithmic Voronoi cell at a point on a Gaussian model is a convex set contained in its log-normal spectrahedron. We show that for models of ML degree one and linear covariance models the two sets coincide. In particular, they are equal for both directed and undirected graphical models. We introduce decomposition theory of logarithmic Voronoi cells for the latter family. We also study covariance models, for which logarithmic Voronoi cells are, in general, strictly contained in log-normal spectrahedra. We give an explicit description of logarithmic Voronoi cells for the bivariate correlation model and show that they are semi-algebraic sets. Finally, we state a conjecture that logarithmic Voronoi cells for unrestricted correlation models are not semi-algebraic.

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Complex Critical Points of Deep Linear Neural Networks

We extend the work of Mehta, Chen, Tang, and Hauenstein on computing the complex critical points of the loss function of deep linear neutral networks when the activation function is the identity function. For networks with a single hidden layer trained on a single data point we give an improved bound on the number of complex critical points of the loss function. We show that for any number of hidden layers complex critical points with zero coordinates arise in certain patterns which we completely classify for networks with one hidden layer. We report our results of computational experiments with varying network architectures defining small deep linear networks using HomotopyContinuation.jl.

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The degree of the central curve in semidefinite, linear, and quadratic programming

The Zariski closure of the central path which interior point algorithms track in convex optimization problems such as linear, quadratic, and semidefinite programs is an algebraic curve. The degree of this curve has been studied in relation to the complexity of these interior point algorithms, and for linear programs it was computed by De Loera, Sturmfels, and Vinzant in 2012. We show that the degree of the central curve for generic semidefinite programs is equal to the maximum likelihood degree of linear concentration models. New results from the intersection theory of the space of complete quadrics imply that this is a polynomial in the size of semidefinite matrices with degree equal to the number of constraints. Besides its degree we explore the arithmetic genus of the same curve. We also compute the degree of the central curve for generic linear programs with different techniques which extend to bounding the same degree for generic quadratic programs.

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Symmetry Adapted Gram Spectrahedra

This paper explores the geometric structure of the spectrahedral cone, called the symmetry adapted PSD cone, and the symmetry adapted Gram spectrahedron of a symmetric polynomial. In particular, we determine the dimension of the symmetry adapted PSD cone, describe its extreme rays, and discuss the structure of its matrix representations. We also consider the symmetry adapted Gram spectrahedra for specific families of symmetric polynomials including binary symmetric polynomials, quadratics, and ternary quartics and sextics which give us further insight into these symmetric SOS polynomials. Finally, we discuss applications of the theory of sums of squares and symmetric polynomials which arise from symmetric function inequalities.

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Average Behavior of Minimal Free Resolutions of Monomial Ideals

We describe the typical homological properties of monomial ideals defined by random generating sets. We show that, under mild assumptions, random monomial ideals (RMI's) will almost always have resolutions of maximal length; that is, the projective dimension will almost always be $n$, where $n$ is the number of variables in the polynomial ring. We give a rigorous proof that Cohen-Macaulayness is a "rare" property. We characterize when an RMI is generic/strongly generic, and when it "is Scarf"---in other words, when the algebraic Scarf complex of $M\subset S=k[x_1,\ldots,x_n]$ gives a minimal free resolution of $S/M$. As a result we see that, outside of a very specific ratio of model parameters, RMI's are Scarf only when they are generic. We end with a discussion of the average magnitude of Betti numbers.

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Maximum likelihood estimation of the Latent Class Model through model boundary decomposition

The Expectation-Maximization (EM) algorithm is routinely used for the maximum likelihood estimation in the latent class analysis. However, the EM algorithm comes with no guarantees of reaching the global optimum. We study the geometry of the latent class model in order to understand the behavior of the maximum likelihood estimator. In particular, we characterize the boundary stratification of the binary latent class model with a binary hidden variable. For small models, such as for three binary observed variables, we show that this stratification allows exact computation of the maximum likelihood estimator. In this case we use simulations to study the maximum likelihood estimation attraction basins of the various strata. Our theoretical study is complemented with a careful analysis of the EM fixed point ideal which provides an alternative method of studying the boundary stratification and maximizing the likelihood function. In particular, we compute the minimal primes of this ideal in the case of a binary latent class model with a binary or ternary hidden random variable.

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The Maximum Likelihood Degree of Toric Varieties

We study the maximum likelihood degree (ML degree) of toric varieties, known as discrete exponential models in statistics. By introducing scaling coefficients to the monomial parameterization of the toric variety, one can change the ML degree. We show that the ML degree is equal to the degree of the toric variety for generic scalings, while it drops if and only if the scaling vector is in the locus of the principal $A$-determinant. We also illustrate how to compute the ML estimate of a toric variety numerically via homotopy continuation from a scaled toric variety with low ML degree. Throughout, we include examples motivated by algebraic geometry and statistics. We compute the ML degree of rational normal scrolls and a large class of Veronese-type varieties. In addition, we investigate the ML degree of scaled Segre varieties, hierarchical loglinear models, and graphical models.

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