arXiv subjects

Shafiq Joty

Publications and source records attributed to Shafiq Joty.

At least 73 records · Page 4Linked to original sources

arXiv2025

CodeXEmbed: A Generalist Embedding Model Family for Multiligual and Multi-task Code Retrieval

Despite the success of text retrieval in many NLP tasks, code retrieval remains a largely underexplored area. Most text retrieval systems are tailored for natural language queries, often neglecting the specific challenges of retrieving code. This gap leaves existing models unable to effectively capture the diversity of programming languages and tasks across different domains, highlighting the need for more focused research in code retrieval. To address this, we introduce CodeXEmbed, a family of large-scale code embedding models ranging from 400M to 7B parameters. Our novel training pipeline unifies multiple programming languages and transforms various code-related tasks into a common retrieval framework, enhancing model generalizability and retrieval performance. Our 7B model sets a new state-of-the-art (SOTA) in code retrieval, outperforming the previous leading model, Voyage-Code, by over 20% on CoIR benchmark. In addition to excelling in code retrieval, our models demonstrate competitive performance on the widely adopted BeIR text retrieval benchmark, offering versatility across domains. Experimental results demonstrate that improving retrieval performance significantly enhances end-to-end Retrieval-Augmented Generation (RAG) performance for code-related tasks.

cs.SE↗

arXiv2025

Text2Vis: A Challenging and Diverse Benchmark for Generating Multimodal Visualizations from Text

Automated data visualization plays a crucial role in simplifying data interpretation, enhancing decision-making, and improving efficiency. While large language models (LLMs) have shown promise in generating visualizations from natural language, the absence of comprehensive benchmarks limits the rigorous evaluation of their capabilities. We introduce Text2Vis, a benchmark designed to assess text-to-visualization models, covering 20+ chart types and diverse data science queries, including trend analysis, correlation, outlier detection, and predictive analytics. It comprises 1,985 samples, each with a data table, natural language query, short answer, visualization code, and annotated charts. The queries involve complex reasoning, conversational turns, and dynamic data retrieval. We benchmark 11 open-source and closed-source models, revealing significant performance gaps, highlighting key challenges, and offering insights for future advancements. To close this gap, we propose the first cross-modal actor-critic agentic framework that jointly refines the textual answer and visualization code, increasing GPT-4o`s pass rate from 26% to 42% over the direct approach and improving chart quality. We also introduce an automated LLM-based evaluation framework that enables scalable assessment across thousands of samples without human annotation, measuring answer correctness, code execution success, visualization readability, and chart accuracy. We release Text2Vis at https://github.com/vis-nlp/Text2Vis.

cs.CL↗

arXiv2025

A Comprehensive Survey of Contamination Detection Methods in Large Language Models

With the rise of Large Language Models (LLMs) in recent years, abundant new opportunities are emerging, but also new challenges, among which contamination is quickly becoming critical. Business applications and fundraising in Artificial Intelligence (AI) have reached a scale at which a few percentage points gained on popular question-answering benchmarks could translate into dozens of millions of dollars, placing high pressure on model integrity. At the same time, it is becoming harder and harder to keep track of the data that LLMs have seen; if not impossible with closed-source models like GPT-4 and Claude-3 not divulging any information on the training set. As a result, contamination becomes a major issue: LLMs' performance may not be reliable anymore, as the high performance may be at least partly due to their previous exposure to the data. This limitation jeopardizes real capability improvement in the field of NLP, yet, there remains a lack of methods on how to efficiently detect contamination. In this paper, we survey all recent work on contamination detection with LLMs, analyzing their methodologies and use cases to shed light on the appropriate usage of contamination detection methods. Our work calls the NLP research community's attention into systematically taking into account contamination bias in LLM evaluation.

cs.CL↗

arXiv2025

Judging the Judges: Can Large Vision-Language Models Fairly Evaluate Chart Comprehension and Reasoning?

Charts are ubiquitous as they help people understand and reason with data. Recently, various downstream tasks, such as chart question answering, chart2text, and fact-checking, have emerged. Large Vision-Language Models (LVLMs) show promise in tackling these tasks, but their evaluation is costly and time-consuming, limiting real-world deployment. While using LVLMs as judges to assess the chart comprehension capabilities of other LVLMs could streamline evaluation processes, challenges like proprietary datasets, restricted access to powerful models, and evaluation costs hinder their adoption in industrial settings. To this end, we present a comprehensive evaluation of 13 open-source LVLMs as judges for diverse chart comprehension and reasoning tasks. We design both pairwise and pointwise evaluation tasks covering criteria like factual correctness, informativeness, and relevancy. Additionally, we analyze LVLM judges based on format adherence, positional consistency, length bias, and instruction-following. We focus on cost-effective LVLMs (<10B parameters) suitable for both research and commercial use, following a standardized evaluation protocol and rubric to measure the LVLM judge's accuracy. Experimental results reveal notable variability: while some open LVLM judges achieve GPT-4-level evaluation performance (about 80% agreement with GPT-4 judgments), others struggle (below ~10% agreement). Our findings highlight that state-of-the-art open-source LVLMs can serve as cost-effective automatic evaluators for chart-related tasks, though biases such as positional preference and length bias persist.

cs.CL↗

arXiv2025

On Positional Bias of Faithfulness for Long-form Summarization

Large Language Models (LLMs) often exhibit positional bias in long-context settings, under-attending to information in the middle of inputs. We investigate the presence of this bias in long-form summarization, its impact on faithfulness, and various techniques to mitigate this bias. To consistently evaluate faithfulness, we first compile a benchmark of eight human-annotated long-form summarization datasets and perform a meta-evaluation of faithfulness metrics. We show that LLM-based faithfulness metrics, though effective with full-context inputs, remain sensitive to document order, indicating positional bias. Analyzing LLM-generated summaries across six datasets, we find a "U-shaped" trend in faithfulness, where LLMs faithfully summarize the beginning and end of documents but neglect middle content. Perturbing document order similarly reveals models are less faithful when important documents are placed in the middle of the input. We find that this behavior is partly due to shifting focus with context length: as context increases, summaries become less faithful, but beyond a certain length, faithfulness improves as the model focuses on the end. Finally, we experiment with different generation techniques to reduce positional bias and find that prompting techniques effectively direct model attention to specific positions, whereas more sophisticated approaches offer limited improvements. Our data and code are available in https://github.com/meetdavidwan/longformfact.

cs.CL↗

arXiv2025

Generalized Out-of-Distribution Detection and Beyond in Vision Language Model Era: A Survey

Detecting out-of-distribution (OOD) samples is crucial for ensuring the safety of machine learning systems and has shaped the field of OOD detection. Meanwhile, several other problems are closely related to OOD detection, including anomaly detection (AD), novelty detection (ND), open set recognition (OSR), and outlier detection (OD). To unify these problems, a generalized OOD detection framework was proposed, taxonomically categorizing these five problems. However, Vision Language Models (VLMs) such as CLIP have significantly changed the paradigm and blurred the boundaries between these fields, again confusing researchers. In this survey, we first present a generalized OOD detection v2, encapsulating the evolution of these fields in the VLM era. Our framework reveals that, with some field inactivity and integration, the demanding challenges have become OOD detection and AD. Then, we highlight the significant shift in the definition, problem settings, and benchmarks; we thus feature a comprehensive review of the methodology for OOD detection and related tasks to clarify their relationship to OOD detection. Finally, we explore the advancements in the emerging Large Vision Language Model (LVLM) era, such as GPT-4V. We conclude with open challenges and future directions. The resource is available at https://github.com/AtsuMiyai/Awesome-OOD-VLM.

cs.CV↗

arXiv2025

J4R: Learning to Judge with Equivalent Initial State Group Relative Policy Optimization

To keep pace with the increasing pace of large language models (LLM) development, model output evaluation has transitioned away from time-consuming human evaluation to automatic evaluation, where LLMs themselves are tasked with assessing and critiquing other model outputs. LLM-as-judge models are a class of generative evaluators that excel in evaluating relatively simple domains, like chat quality, but struggle in reasoning intensive domains where model responses contain more substantive and challenging content. To remedy existing judge shortcomings, we explore training judges with reinforcement learning (RL). We make three key contributions: (1) We propose the Equivalent Initial State Group Relative Policy Optimization (EIS-GRPO) algorithm, which allows us to train our judge to be robust to positional biases that arise in more complex evaluation settings. (2) We introduce ReasoningJudgeBench, a benchmark that evaluates judges in diverse reasoning settings not covered by prior work. (3) We train Judge for Reasoning (J4R), a 7B judge trained with EIS-GRPO that outperforms GPT-4o and the next best small judge by 6.7% and 9%, matching or exceeding the performance of larger GRPO-trained judges on both JudgeBench and ReasoningJudgeBench.

cs.CL↗

arXiv2025

The Emergence of Abstract Thought in Large Language Models Beyond Any Language

As large language models (LLMs) continue to advance, their capacity to function effectively across a diverse range of languages has shown marked improvement. Preliminary studies observe that the hidden activations of LLMs often resemble English, even when responding to non-English prompts. This has led to the widespread assumption that LLMs may "think" in English. However, more recent results showing strong multilingual performance, even surpassing English performance on specific tasks in other languages, challenge this view. In this work, we find that LLMs progressively develop a core language-agnostic parameter space-a remarkably small subset of parameters whose deactivation results in significant performance degradation across all languages. This compact yet critical set of parameters underlies the model's ability to generalize beyond individual languages, supporting the emergence of abstract thought that is not tied to any specific linguistic system. Specifically, we identify language-related neurons-those are consistently activated during the processing of particular languages, and categorize them as either shared (active across multiple languages) or exclusive (specific to one). As LLMs undergo continued development over time, we observe a marked increase in both the proportion and functional importance of shared neurons, while exclusive neurons progressively diminish in influence. These shared neurons constitute the backbone of the core language-agnostic parameter space, supporting the emergence of abstract thought. Motivated by these insights, we propose neuron-specific training strategies tailored to LLMs' language-agnostic levels at different development stages. Experiments across diverse LLM families support our approach.

cs.CL↗

arXiv2025

What Makes a Good Natural Language Prompt?

As large language models (LLMs) have progressed towards more human-like and human--AI communications have become prevalent, prompting has emerged as a decisive component. However, there is limited conceptual consensus on what exactly quantifies natural language prompts. We attempt to address this question by conducting a meta-analysis surveying more than 150 prompting-related papers from leading NLP and AI conferences from 2022 to 2025 and blogs. We propose a property- and human-centric framework for evaluating prompt quality, encompassing 21 properties categorized into six dimensions. We then examine how existing studies assess their impact on LLMs, revealing their imbalanced support across models and tasks, and substantial research gaps. Further, we analyze correlations among properties in high-quality natural language prompts, deriving prompting recommendations. We then empirically explore multi-property prompt enhancements in reasoning tasks, observing that single-property enhancements often have the greatest impact. Finally, we discover that instruction-tuning on property-enhanced prompts can result in better reasoning models. Our findings establish a foundation for property-centric prompt evaluation and optimization, bridging the gaps between human--AI communication and opening new prompting research directions.

cs.CL↗

arXiv2025

Helpful Agent Meets Deceptive Judge: Understanding Vulnerabilities in Agentic Workflows

Agentic workflows -- where multiple large language model (LLM) instances interact to solve tasks -- are increasingly built on feedback mechanisms, where one model evaluates and critiques another. Despite the promise of feedback-driven improvement, the stability of agentic workflows rests on the reliability of the judge. However, judges may hallucinate information, exhibit bias, or act adversarially -- introducing critical vulnerabilities into the workflow. In this work, we present a systematic analysis of agentic workflows under deceptive or misleading feedback. We introduce a two-dimensional framework for analyzing judge behavior, along axes of intent (from constructive to malicious) and knowledge (from parametric-only to retrieval-augmented systems). Using this taxonomy, we construct a suite of judge behaviors and develop WAFER-QA, a new benchmark with critiques grounded in retrieved web evidence to evaluate robustness of agentic workflows against factually supported adversarial feedback. We reveal that even strongest agents are vulnerable to persuasive yet flawed critiques -- often switching correct answers after a single round of misleading feedback. Taking a step further, we study how model predictions evolve over multiple rounds of interaction, revealing distinct behavioral patterns between reasoning and non-reasoning models. Our findings highlight fundamental vulnerabilities in feedback-based workflows and offer guidance for building more robust agentic systems.

cs.AI↗

arXiv2025

Beyond In-Context Learning: Aligning Long-form Generation of Large Language Models via Task-Inherent Attribute Guidelines

In-context learning (ICL) is an important yet not fully understood ability of pre-trained large language models (LLMs). It can greatly enhance task performance using a few examples, termed demonstrations, without fine-tuning. Although effective in question answering, ICL often underperforms in long-form generation tasks such as summarization. Under appropriately realistic assumptions, we empirically and theoretically show that ICL demonstrations alone are insufficient to teach LLMs the task language and format distributions for generation. We argue for explicit exposure to the task distributions and hypothesize that defining them by prompting enhances model performance. To this end, we present LongGuide, which efficiently generates two parallel streams of guidelines capturing task language and format properties: (i) Metric Guidelines (MGs) that instruct models to optimize self-evaluated metrics; and (ii) Output Constraint Guidelines (OCGs) that constrain generation at both token and sentence levels. LongGuide automatically selects the best combination of guidelines, improving both strong open- and closed-source LLMs by over 5% in both zero- and few-shot settings. We show that LongGuide is generalizable, learnable by weak models to enhance strong ones, and integrates synergistically with automatic prompt optimizers.

cs.CL↗

arXiv2025

Beyond Output Matching: Bidirectional Alignment for Enhanced In-Context Learning

Large language models (LLMs) have shown impressive few-shot generalization on many tasks via in-context learning (ICL). Despite their success in showing such emergent abilities, the scale and complexity of larger models also lead to unprecedentedly high computational demands and deployment challenges. In reaction, researchers explore transferring the powerful capabilities of larger models to more efficient and compact models by typically aligning the output of smaller (student) models with that of larger (teacher) models. Existing methods either train student models on the generated outputs of teacher models or imitate their token-level probability distributions. However, these distillation methods pay little to no attention to the input, which also plays a crucial role in ICL. Based on the finding that the performance of ICL is highly sensitive to the selection of demonstration examples, we propose Bidirectional Alignment (BiAlign) to fully leverage the models' preferences for ICL examples to improve the ICL abilities of student models. Specifically, we introduce the alignment of input preferences between student and teacher models by incorporating a novel ranking loss, in addition to aligning the token-level output distribution. With extensive experiments and analysis, we demonstrate that BiAlign can consistently outperform existing baselines on a variety of tasks involving language understanding, reasoning, and coding.

cs.CL↗

arXiv2025

Relevant or Random: Can LLMs Truly Perform Analogical Reasoning?

Analogical reasoning is a unique ability of humans to address unfamiliar challenges by transferring strategies from relevant past experiences. One key finding in psychology is that compared with irrelevant past experiences, recalling relevant ones can help humans better handle new tasks. Coincidentally, the NLP community has also recently found that self-generating relevant examples in the context can help large language models (LLMs) better solve a given problem than hand-crafted prompts. However, it is yet not clear whether relevance is the key factor eliciting such capability, i.e., can LLMs benefit more from self-generated relevant examples than irrelevant ones? In this work, we systematically explore whether LLMs can truly perform analogical reasoning on a diverse set of reasoning tasks. With extensive experiments and analysis, we show that self-generated random examples can surprisingly achieve comparable or even better performance on certain tasks, e.g., 4% performance boost on GSM8K with random biological examples. We find that the accuracy of self-generated examples is the key factor and subsequently design two novel methods with improved performance and significantly reduced inference costs. Overall, we aim to advance a deeper understanding of LLM analogical reasoning and hope this work stimulates further research in the design of self-generated contexts.

cs.CL↗

arXiv2025

Why Vision Language Models Struggle with Visual Arithmetic? Towards Enhanced Chart and Geometry Understanding

Vision Language Models (VLMs) have achieved remarkable progress in multimodal tasks, yet they often struggle with visual arithmetic, seemingly simple capabilities like object counting or length comparison, which are essential for relevant complex tasks like chart understanding and geometric reasoning. In this work, we first investigate the root causes of this deficiency through a suite of probing tasks focusing on basic visual arithmetic. Our analysis reveals that while pre-trained vision encoders typically capture sufficient information, the text decoder often fails to decode it correctly for arithmetic reasoning. To address this, we propose CogAlign, a novel post-training strategy inspired by Piaget's theory of cognitive development. CogAlign trains VLMs to recognize invariant properties under visual transformations. We demonstrate that this approach significantly improves the performance of three diverse VLMs on our proposed probing tasks. Furthermore, CogAlign enhances performance by an average of 4.6% on CHOCOLATE and 2.9% on MATH-VISION, outperforming or matching supervised fine-tuning methods while requiring only 60% less training data. These results highlight the effectiveness and generalizability of CogAlign in improving fundamental visual arithmetic capabilities and their transfer to downstream tasks.

cs.AI↗

arXiv2025

Evaluating Judges as Evaluators: The JETTS Benchmark of LLM-as-Judges as Test-Time Scaling Evaluators

Scaling test-time computation, or affording a generator large language model (LLM) extra compute during inference, typically employs the help of external non-generative evaluators (i.e., reward models). Concurrently, LLM-judges, models trained to generate evaluations and critiques (explanations) in natural language, are becoming increasingly popular in automatic evaluation. Despite judge empirical successes, their effectiveness as evaluators in test-time scaling settings is largely unknown. In this paper, we introduce the Judge Evaluation for Test-Time Scaling (JETTS) benchmark, which evaluates judge performance in three domains (math reasoning, code generation, and instruction following) under three task settings: response reranking, step-level beam search, and critique-based response refinement. We evaluate 10 different judge models (7B-70B parameters) for 8 different base generator models (6.7B-72B parameters). Our benchmark shows that while judges are competitive with outcome reward models in reranking, they are consistently worse than process reward models in beam search procedures. Furthermore, though unique to LLM-judges, their natural language critiques are currently ineffective in guiding the generator towards better responses.

cs.CL↗

arXiv2025

Multi2: Multi-Agent Test-Time Scalable Framework for Multi-Document Processing

Recent advances in test-time scaling have shown promising results in improving Large Language Model (LLM) performance through strategic computation allocation during inference. While this approach has demonstrated strong improvements in logical and mathematical reasoning tasks, its application to natural language generation (NLG), particularly summarization, remains unexplored. Multi-Document Summarization (MDS), a fundamental task in NLG, presents unique challenges by requiring models to extract and synthesize essential information across multiple lengthy documents. Unlike reasoning tasks, MDS demands a more nuanced approach to prompt design and ensemble methods, as no single "best" prompt can satisfy diverse summarization requirements. We propose a novel framework leveraging test-time scaling for MDS. Our approach employs prompt ensemble techniques to generate multiple candidate summaries using various prompts, then combines them with an aggregator to produce a refined summary. To evaluate our method effectively, we also introduce two new LLM-based metrics: the Consistency-Aware Preference (CAP) score and LLM Atom-Content-Unit (LLM-ACU) score, which assess summary quality while addressing the positional bias inherent in traditional automatic evaluation. Our extensive experiments demonstrate that this framework significantly enhances summary quality while also revealing the practical scaling boundaries to MDS tasks.

cs.CL↗

arXiv2025

Learning Auxiliary Tasks Improves Reference-Free Hallucination Detection in Open-Domain Long-Form Generation

Hallucination, the generation of factually incorrect information, remains a significant challenge for large language models (LLMs), especially in open-domain long-form generation. Existing approaches for detecting hallucination in long-form tasks either focus on limited domains or rely heavily on external fact-checking tools, which may not always be available. In this work, we systematically investigate reference-free hallucination detection in open-domain long-form responses. Our findings reveal that internal states (e.g., model's output probability and entropy) alone are insufficient for reliably (i.e., better than random guessing) distinguishing between factual and hallucinated content. To enhance detection, we explore various existing approaches, including prompting-based methods, probing, and fine-tuning, with fine-tuning proving the most effective. To further improve the accuracy, we introduce a new paradigm, named RATE-FT, that augments fine-tuning with an auxiliary task for the model to jointly learn with the main task of hallucination detection. With extensive experiments and analysis using a variety of model families & datasets, we demonstrate the effectiveness and generalizability of our method, e.g., +3% over general fine-tuning methods on LongFact.

cs.CL↗

arXiv2025

ParaICL: Towards Parallel In-Context Learning

Large language models (LLMs) have become the norm in natural language processing (NLP), excelling in few-shot in-context learning (ICL) with their remarkable abilities. Nonetheless, the success of ICL largely hinges on the choice of few-shot demonstration examples, making the selection process increasingly crucial. Existing methods have delved into optimizing the quantity and semantic similarity of these examples to improve ICL performances. However, our preliminary experiments indicate that the effectiveness of ICL is limited by the length of the input context. Moreover, varying combinations of few-shot demonstration examples can significantly boost accuracy across different test samples. To address this, we propose a novel method named parallel in-context learning (ParaICL) that effectively utilizes all demonstration examples without exceeding the manageable input context length. ParaICL employs parallel batching to distribute demonstration examples into different batches according to the semantic similarities of the questions in the demonstrations to the test question. It then computes normalized batch semantic scores for each batch. A weighted average semantic objective, constrained by adaptive plausibility, is applied to select the most appropriate tokens. Through extensive experiments, we validate the effectiveness of ParaICL and conduct ablation studies to underscore its design rationale. We further demonstrate that ParaICL can seamlessly integrate with existing methods.

cs.CL↗