arXiv subjects

Shan He

Publications and source records attributed to Shan He.

At least 37 records · Page 2Linked to original sources

arXiv2025

PoAct: Policy and Action Dual-Control Agent for Generalized Applications

Based on their superior comprehension and reasoning capabilities, Large Language Model (LLM) driven agent frameworks have achieved significant success in numerous complex reasoning tasks. ReAct-like agents can solve various intricate problems step-by-step through progressive planning and tool calls, iteratively optimizing new steps based on environmental feedback. However, as the planning capabilities of LLMs improve, the actions invoked by tool calls in ReAct-like frameworks often misalign with complex planning and challenging data organization. Code Action addresses these issues while also introducing the challenges of a more complex action space and more difficult action organization. To leverage Code Action and tackle the challenges of its complexity, this paper proposes Policy and Action Dual-Control Agent (PoAct) for generalized applications. The aim is to achieve higher-quality code actions and more accurate reasoning paths by dynamically switching reasoning policies and modifying the action space. Experimental results on the Agent Benchmark for both legal and generic scenarios demonstrate the superior reasoning capabilities and reduced token consumption of our approach in complex tasks. On the LegalAgentBench, our method shows a 20 percent improvement over the baseline while requiring fewer tokens. We conducted experiments and analyses on the GPT-4o and GLM-4 series models, demonstrating the significant potential and scalability of our approach to solve complex problems.

cs.AI↗

arXiv2024

EmotiveTalk: Expressive Talking Head Generation through Audio Information Decoupling and Emotional Video Diffusion

Diffusion models have revolutionized the field of talking head generation, yet still face challenges in expressiveness, controllability, and stability in long-time generation. In this research, we propose an EmotiveTalk framework to address these issues. Firstly, to realize better control over the generation of lip movement and facial expression, a Vision-guided Audio Information Decoupling (V-AID) approach is designed to generate audio-based decoupled representations aligned with lip movements and expression. Specifically, to achieve alignment between audio and facial expression representation spaces, we present a Diffusion-based Co-speech Temporal Expansion (Di-CTE) module within V-AID to generate expression-related representations under multi-source emotion condition constraints. Then we propose a well-designed Emotional Talking Head Diffusion (ETHD) backbone to efficiently generate highly expressive talking head videos, which contains an Expression Decoupling Injection (EDI) module to automatically decouple the expressions from reference portraits while integrating the target expression information, achieving more expressive generation performance. Experimental results show that EmotiveTalk can generate expressive talking head videos, ensuring the promised controllability of emotions and stability during long-time generation, yielding state-of-the-art performance compared to existing methods.

cs.CV↗

arXiv2024

Dockformer: A transformer-based molecular docking paradigm for large-scale virtual screening

Molecular docking is a crucial step in drug development, which enables the virtual screening of compound libraries to identify potential ligands that target proteins of interest. However, the computational complexity of traditional docking models increases as the size of the compound library increases. Recently, deep learning algorithms can provide data-driven research and development models to increase the speed of the docking process. Unfortunately, few models can achieve superior screening performance compared to that of traditional models. Therefore, a novel deep learning-based docking approach named Dockformer is introduced in this study. Dockformer leverages multimodal information to capture the geometric topology and structural knowledge of molecules and can directly generate binding conformations with the corresponding confidence measures in an end-to-end manner. The experimental results show that Dockformer achieves success rates of 90.53% and 82.71% on the PDBbind core set and PoseBusters benchmarks, respectively, and more than a 100-fold increase in the inference process speed, outperforming almost all state-of-the-art docking methods. In addition, the ability of Dockformer to identify the main protease inhibitors of coronaviruses is demonstrated in a real-world virtual screening scenario. Considering its high docking accuracy and screening efficiency, Dockformer can be regarded as a powerful and robust tool in the field of drug design.

cs.LG↗

arXiv2023

Towards Faithful Explanations for Text Classification with Robustness Improvement and Explanation Guided Training

Feature attribution methods highlight the important input tokens as explanations to model predictions, which have been widely applied to deep neural networks towards trustworthy AI. However, recent works show that explanations provided by these methods face challenges of being faithful and robust. In this paper, we propose a method with Robustness improvement and Explanation Guided training towards more faithful EXplanations (REGEX) for text classification. First, we improve model robustness by input gradient regularization technique and virtual adversarial training. Secondly, we use salient ranking to mask noisy tokens and maximize the similarity between model attention and feature attribution, which can be seen as a self-training procedure without importing other external information. We conduct extensive experiments on six datasets with five attribution methods, and also evaluate the faithfulness in the out-of-domain setting. The results show that REGEX improves fidelity metrics of explanations in all settings and further achieves consistent gains based on two randomization tests. Moreover, we show that using highlight explanations produced by REGEX to train select-then-predict models results in comparable task performance to the end-to-end method.

cs.CL↗

arXiv2023

Multi-Domain Learning From Insufficient Annotations

Multi-domain learning (MDL) refers to simultaneously constructing a model or a set of models on datasets collected from different domains. Conventional approaches emphasize domain-shared information extraction and domain-private information preservation, following the shared-private framework (SP models), which offers significant advantages over single-domain learning. However, the limited availability of annotated data in each domain considerably hinders the effectiveness of conventional supervised MDL approaches in real-world applications. In this paper, we introduce a novel method called multi-domain contrastive learning (MDCL) to alleviate the impact of insufficient annotations by capturing both semantic and structural information from both labeled and unlabeled data.Specifically, MDCL comprises two modules: inter-domain semantic alignment and intra-domain contrast. The former aims to align annotated instances of the same semantic category from distinct domains within a shared hidden space, while the latter focuses on learning a cluster structure of unlabeled instances in a private hidden space for each domain. MDCL is readily compatible with many SP models, requiring no additional model parameters and allowing for end-to-end training. Experimental results across five textual and image multi-domain datasets demonstrate that MDCL brings noticeable improvement over various SP models.Furthermore, MDCL can further be employed in multi-domain active learning (MDAL) to achieve a superior initialization, eventually leading to better overall performance.

cs.LG↗

arXiv2023

Perturbation-Based Two-Stage Multi-Domain Active Learning

In multi-domain learning (MDL) scenarios, high labeling effort is required due to the complexity of collecting data from various domains. Active Learning (AL) presents an encouraging solution to this issue by annotating a smaller number of highly informative instances, thereby reducing the labeling effort. Previous research has relied on conventional AL strategies for MDL scenarios, which underutilize the domain-shared information of each instance during the selection procedure. To mitigate this issue, we propose a novel perturbation-based two-stage multi-domain active learning (P2S-MDAL) method incorporated into the well-regarded ASP-MTL model. Specifically, P2S-MDAL involves allocating budgets for domains and establishing regions for diversity selection, which are further used to select the most cross-domain influential samples in each region. A perturbation metric has been introduced to evaluate the robustness of the shared feature extractor of the model, facilitating the identification of potentially cross-domain influential samples. Experiments are conducted on three real-world datasets, encompassing both texts and images. The superior performance over conventional AL strategies shows the effectiveness of the proposed strategy. Additionally, an ablation study has been carried out to demonstrate the validity of each component. Finally, we outline several intriguing potential directions for future MDAL research, thus catalyzing the field's advancement.

cs.LG↗

arXiv2022

Multi-Domain Active Learning: Literature Review and Comparative Study

Multi-domain learning (MDL) refers to learning a set of models simultaneously, where each model is specialized to perform a task in a particular domain. Generally, a high labeling effort is required in MDL, as data needs to be labeled by human experts for every domain. Active learning (AL) can be utilized in MDL to reduce the labeling effort by only using the most informative data. The resultant paradigm is termed multi-domain active learning (MDAL). In this work, we provide an exhaustive literature review for MDAL on the relevant fields, including AL, cross-domain information sharing schemes, and cross-domain instance evaluation approaches. It is found that the few studies which have been directly conducted on MDAL cannot serve as off-the-shelf solutions on more general MDAL tasks. To fill this gap, we construct a pipeline of MDAL and present a comprehensive comparative study of thirty different algorithms, which are established by combining six representative MDL models and five commonly used AL strategies. We evaluate the algorithms on six datasets involving textual and visual classification tasks. In most cases, AL brings notable improvements to MDL, and the naive BvSB (best vs. second best) Uncertainty strategy can perform competitively with the state-of-the-art AL strategies. Besides, BvSB with the MAN (multinomial adversarial networks) model can consistently achieve top or above-average performance on all the datasets. Furthermore, we qualitatively analyze the behaviors of the well-performed strategies and models, shedding light on their superior performance in the comparison. Finally, we recommend using BvSB with the MAN model in the application of MDAL due to their good performance in the experiments.

cs.LG↗

arXiv2022

MPVNN: Mutated Pathway Visible Neural Network Architecture for Interpretable Prediction of Cancer-specific Survival Risk

Survival risk prediction using gene expression data is important in making treatment decisions in cancer. Standard neural network (NN) survival analysis models are black boxes with lack of interpretability. More interpretable visible neural network (VNN) architectures are designed using biological pathway knowledge. But they do not model how pathway structures can change for particular cancer types. We propose a novel Mutated Pathway VNN or MPVNN architecture, designed using prior signaling pathway knowledge and gene mutation data-based edge randomization simulating signal flow disruption. As a case study, we use the PI3K-Akt pathway and demonstrate overall improved cancer-specific survival risk prediction results of MPVNN over standard non-NN and other similar sized NN survival analysis methods. We show that trained MPVNN architecture interpretation, which points to smaller sets of genes connected by signal flow within the PI3K-Akt pathway that are important in risk prediction for particular cancer types, is reliable.

q-bio.QM↗

arXiv2021

YACLC: A Chinese Learner Corpus with Multidimensional Annotation

Learner corpus collects language data produced by L2 learners, that is second or foreign-language learners. This resource is of great relevance for second language acquisition research, foreign-language teaching, and automatic grammatical error correction. However, there is little focus on learner corpus for Chinese as Foreign Language (CFL) learners. Therefore, we propose to construct a large-scale, multidimensional annotated Chinese learner corpus. To construct the corpus, we first obtain a large number of topic-rich texts generated by CFL learners. Then we design an annotation scheme including a sentence acceptability score as well as grammatical error and fluency-based corrections. We build a crowdsourcing platform to perform the annotation effectively (https://yaclc.wenmind.net). We name the corpus YACLC (Yet Another Chinese Learner Corpus) and release it as part of the CUGE benchmark (http://cuge.baai.ac.cn). By analyzing the original sentences and annotations in the corpus, we found that YACLC has a considerable size and very high annotation quality. We hope this corpus can further enhance the studies on Chinese International Education and Chinese automatic grammatical error correction.

cs.CL↗

arXiv2021

GloDyNE: Global Topology Preserving Dynamic Network Embedding

Learning low-dimensional topological representation of a network in dynamic environments is attracting much attention due to the time-evolving nature of many real-world networks. The main and common objective of Dynamic Network Embedding (DNE) is to efficiently update node embeddings while preserving network topology at each time step. The idea of most existing DNE methods is to capture the topological changes at or around the most affected nodes (instead of all nodes) and accordingly update node embeddings. Unfortunately, this kind of approximation, although can improve efficiency, cannot effectively preserve the global topology of a dynamic network at each time step, due to not considering the inactive sub-networks that receive accumulated topological changes propagated via the high-order proximity. To tackle this challenge, we propose a novel node selecting strategy to diversely select the representative nodes over a network, which is coordinated with a new incremental learning paradigm of Skip-Gram based embedding approach. The extensive experiments show GloDyNE, with a small fraction of nodes being selected, can already achieve the superior or comparable performance w.r.t. the state-of-the-art DNE methods in three typical downstream tasks. Particularly, GloDyNE significantly outperforms other methods in the graph reconstruction task, which demonstrates its ability of global topology preservation. The source code is available at https://github.com/houchengbin/GloDyNE

cs.SI↗

arXiv2021

Robust Dynamic Network Embedding via Ensembles

Dynamic Network Embedding (DNE) has recently attracted considerable attention due to the advantage of network embedding in various fields and the dynamic nature of many real-world networks. An input dynamic network to DNE is often assumed to have smooth changes over snapshots, which however would not hold for all real-world scenarios. It is natural to ask if existing DNE methods can perform well for an input dynamic network without smooth changes. To quantify it, an index called Degree of Changes (DoCs) is suggested so that the smaller DoCs indicates the smoother changes. Our comparative study shows several DNE methods are not robust enough to different DoCs even if the corresponding input dynamic networks come from the same dataset, which would make these methods unreliable and hard to use for unknown real-world applications. To propose an effective and more robust DNE method, we follow the notion of ensembles where each base learner adopts an incremental Skip-Gram embedding model. To further boost the performance, a simple yet effective strategy is designed to enhance the diversity among base learners at each timestep by capturing different levels of local-global topology. Extensive experiments demonstrate the superior effectiveness and robustness of the proposed method compared to state-of-the-art DNE methods, as well as the benefits of special designs in the proposed method and its scalability.

cs.SI↗

arXiv2021

DFGC 2021: A DeepFake Game Competition

This paper presents a summary of the DFGC 2021 competition. DeepFake technology is developing fast, and realistic face-swaps are increasingly deceiving and hard to detect. At the same time, DeepFake detection methods are also improving. There is a two-party game between DeepFake creators and detectors. This competition provides a common platform for benchmarking the adversarial game between current state-of-the-art DeepFake creation and detection methods. In this paper, we present the organization, results and top solutions of this competition and also share our insights obtained during this event. We also release the DFGC-21 testing dataset collected from our participants to further benefit the research community.

cs.CV↗

arXiv2021

Minimum-Time Earth-to-Mars Interplanetary Orbit Transfer Using Adaptive Gaussian Quadrature Collocation

The problem of minimum-time, low-thrust, Earth-to-Mars interplanetary orbital trajectory optimization is considered. The minimum-time orbital transfer problem is modeled as a four-phase optimal control problem where the four phases correspond to planetary alignment, Earth escape, heliocentric transfer, and Mars capture. The four-phase optimal control problem is then solved using a direct collocation adaptive Gaussian quadrature collocation method. The following three models are used in the study: (1) circular planetary motion; (2) elliptic planetary motion; and (3) elliptic planetary motion with gravity perturbations, where the transfer begins in a geostationary orbit and terminates in a Mars-stationary orbit. Results for all three cases are provided, and one particular case is studied in detail to show the key features of the optimal solutions. Using the particular value thrust specific force of $0.00098\times 10^{-4}~\textrm{m}\cdot\textrm{s}^{-2}$, it was found that the minimum times for cases (1), (2), and (3) are, respectively, 215 d, 196 d, and 198 d with departure dates, respectively, of 1 July 2020, 30 June 2020, and 28 June 2020. Finally, the problem formulation developed in this study is compared against prior work on an Earth-to-Mars interplanetary orbit transfer where it is found that the results of this research show significant improvement in transfer time relative to the prior work.

math.OC↗

arXiv2020

Ownership at Large -- Open Problems and Challenges in Ownership Management

Software-intensive organizations rely on large numbers of software assets of different types, e.g., source-code files, tables in the data warehouse, and software configurations. Who is the most suitable owner of a given asset changes over time, e.g., due to reorganization and individual function changes. New forms of automation can help suggest more suitable owners for any given asset at a given point in time. By such efforts on ownership health, accountability of ownership is increased. The problem of finding the most suitable owners for an asset is essentially a program comprehension problem: how do we automatically determine who would be best placed to understand, maintain, evolve (and thereby assume ownership of) a given asset. This paper introduces the Facebook Ownesty system, which uses a combination of ultra large scale data mining and machine learning and has been deployed at Facebook as part of the company's ownership management approach. Ownesty processes many millions of software assets (e.g., source-code files) and it takes into account workflow and organizational aspects. The paper sets out open problems and challenges on ownership for the research community with advances expected from the fields of software engineering, programming languages, and machine learning.

cs.SE↗

arXiv2020

Lossless Attention in Convolutional Networks for Facial Expression Recognition in the Wild

Unlike the constraint frontal face condition, faces in the wild have various unconstrained interference factors, such as complex illumination, changing perspective and various occlusions. Facial expressions recognition (FER) in the wild is a challenging task and existing methods can't perform well. However, for occluded faces (containing occlusion caused by other objects and self-occlusion caused by head posture changes), the attention mechanism has the ability to focus on the non-occluded regions automatically. In this paper, we propose a Lossless Attention Model (LLAM) for convolutional neural networks (CNN) to extract attention-aware features from faces. Our module avoids decay information in the process of generating attention maps by using the information of the previous layer and not reducing the dimensionality. Sequentially, we adaptively refine the feature responses by fusing the attention map with the feature map. We participate in the seven basic expression classification sub-challenges of FG-2020 Affective Behavior Analysis in-the-wild Challenge. And we validate our method on the Aff-Wild2 datasets released by the Challenge. The total accuracy (Accuracy) and the unweighted mean (F1) of our method on the validation set are 0.49 and 0.38 respectively, and the final result is 0.42 (0.67 F1-Score + 0.33 Accuracy).

cs.CV↗

arXiv2019

DynWalks: Global Topology and Recent Changes Awareness Dynamic Network Embedding

Learning topological representation of a network in dynamic environments has recently attracted considerable attention due to the time-evolving nature of many real-world networks i.e. nodes/links might be added/removed as time goes on. Dynamic network embedding aims to learn low dimensional embeddings for unseen and seen nodes by using any currently available snapshots of a dynamic network. For seen nodes, the existing methods either treat them equally important or focus on the $k$ most affected nodes at each time step. However, the former solution is time-consuming, and the later solution that relies on incoming changes may lose the global topology---an important feature for downstream tasks. To address these challenges, we propose a dynamic network embedding method called DynWalks, which includes two key components: 1) An online network embedding framework that can dynamically and efficiently learn embeddings based on the selected nodes; 2) A novel online node selecting scheme that offers the flexible choices to balance global topology and recent changes, as well as to fulfill the real-time constraint if needed. The empirical studies on six real-world dynamic networks under three different slicing ways show that DynWalks significantly outperforms the state-of-the-art methods in graph reconstruction tasks, and obtains comparable results in link prediction tasks. Furthermore, the wall-clock time and complexity analysis demonstrate its excellent time and space efficiency. The source code of DynWalks is available at https://github.com/houchengbin/DynWalks

cs.SI↗

arXiv2019

Attributed Network Embedding for Incomplete Attributed Networks

Attributed networks are ubiquitous since a network often comes with auxiliary attribute information e.g. a social network with user profiles. Attributed Network Embedding (ANE) has recently attracted considerable attention, which aims to learn unified low dimensional node embeddings while preserving both structural and attribute information. The resulting node embeddings can then facilitate various network downstream tasks e.g. link prediction. Although there are several ANE methods, most of them cannot deal with incomplete attributed networks with missing links and/or missing node attributes, which often occur in real-world scenarios. To address this issue, we propose a robust ANE method, the general idea of which is to reconstruct a unified denser network by fusing two sources of information for information enhancement, and then employ a random walks based network embedding method for learning node embeddings. The experiments of link prediction, node classification, visualization, and parameter sensitivity analysis on six real-world datasets validate the effectiveness of our method to incomplete attributed networks.

cs.SI↗

arXiv2019

HEAT: Hyperbolic Embedding of Attributed Networks

Finding a low dimensional representation of hierarchical, structured data described by a network remains a challenging problem in the machine learning community. An emerging approach is embedding these networks into hyperbolic space because it can naturally represent a network's hierarchical structure. However, existing hyperbolic embedding approaches cannot deal with attributed networks, in which nodes are annotated with additional attributes. These attributes might provide additional proximity information to constrain the representations of the nodes, which is important to learn high quality hyperbolic embeddings. To fill this gap, we introduce HEAT (Hyperbolic Embedding of ATributed networks), the first method for embedding attributed networks to a hyperbolic space. HEAT consists of 1) a modified random walk algorithm to obtain training samples that capture both topological and attribute similarity; and 2) a learning algorithm for learning hyperboloid embeddings from the obtained training samples. We show that by leveraging node attributes, HEAT can outperform a state-of-the-art Hyperbolic embedding algorithm on several downstream tasks. As a general embedding method, HEAT opens the door to hyperbolic manifold learning on a wide range of attributed and unattributed networks.

cs.SI↗