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Shan Yu

Publications and source records attributed to Shan Yu.

At least 37 records · Page 2Linked to original sources

Towards Unified Multi-task EEG Analysis with Low-Rank Adaptation

Recent self-supervised pre-training methods for electroencephalogram (EEG) have shown promising results. However, the pre-trained models typically require full fine-tuning on each downstream task individually to achieve good performance. In practical applications involving multiple tasks, utilizing a separate model for each task is not ideal regarding computational and spatial cost. In this study, we go one step further and explore the simultaneous adaptation of a pre-trained model to multiple different tasks. The EEG signals exhibit significant heterogeneity due to their collection from various subjects using diverse devices and experimental setups, resulting in potential conflicts among different tasks that impede joint optimization. To tackle this challenge, we propose MTEEG, a multi-task EEG analysis framework which incorporates task-specific low-rank adaptation (LoRA) modules to disentangle the parameter space and alleviate task conflicts. To investigate the trade-off between task specification and interaction, we propose three variants of MTEEG that integrate the LoRA modules in different ways and evaluate them on six downstream tasks, demonstrating that MTEEG can surpass state-of-the-art single-task methods on the majority of metrics. MTEEG shows the potential of multi-task EEG analysis and promotes the development of general-purpose brain-computer interfaces in the future.

cs.LG↗

Brain-Inspired Graph Multi-Agent Systems for LLM Reasoning

Large Language Models (LLMs) have demonstrated remarkable capabilities across a wide range of language tasks, yet complex multi-step reasoning remains a fundamental challenge. While Large Reasoning Models (LRMs) equipped with extended chain-of-thought mechanisms demonstrate improved performance over standard LLMs, both model types still suffer from accuracy collapse on sufficiently complex tasks, suggesting that scaling model-level reasoning alone is insufficient. Inspired by the global workspace theory of human cognition, we propose Brain-Inspired Graph Multi-Agent Systems (BIGMAS), in which specialized LLM agents are organized as nodes in a dynamically constructed directed graph and coordinate exclusively through a centralized shared workspace. A problem-adaptive GraphDesigner constructs task-specific agent topologies, while a global Orchestrator leverages the complete shared state for routing decisions, overcoming the local-view bottleneck of reactive approaches. Experiments on Game24, Six Fives, and Tower of London across six frontier LLMs demonstrate that BIGMAS consistently improves reasoning performance for both standard LLMs and LRMs, outperforming existing multi-agent baselines including ReAct and Tree of Thoughts, showing that multi-agent architectural design provides complementary gains orthogonal to model-level reasoning enhancements.

cs.AI↗

Autoregressive Visual Decoding from EEG Signals

Electroencephalogram (EEG) signals have become a popular medium for decoding visual information due to their cost-effectiveness and high temporal resolution. However, current approaches face significant challenges in bridging the modality gap between EEG and image data. These methods typically rely on complex adaptation processes involving multiple stages, making it hard to maintain consistency and manage compounding errors. Furthermore, the computational overhead imposed by large-scale diffusion models limit their practicality in real-world brain-computer interface (BCI) applications. In this work, we present AVDE, a lightweight and efficient framework for visual decoding from EEG signals. First, we leverage LaBraM, a pre-trained EEG model, and fine-tune it via contrastive learning to align EEG and image representations. Second, we adopt an autoregressive generative framework based on a "next-scale prediction" strategy: images are encoded into multi-scale token maps using a pre-trained VQ-VAE, and a transformer is trained to autoregressively predict finer-scale tokens starting from EEG embeddings as the coarsest representation. This design enables coherent generation while preserving a direct connection between the input EEG signals and the reconstructed images. Experiments on two datasets show that AVDE outperforms previous state-of-the-art methods in both image retrieval and reconstruction tasks, while using only 10% of the parameters. In addition, visualization of intermediate outputs shows that the generative process of AVDE reflects the hierarchical nature of human visual perception. These results highlight the potential of autoregressive models as efficient and interpretable tools for practical BCI applications.

cs.LG↗

StegaFFD: Privacy-Preserving Face Forgery Detection via Fine-Grained Steganographic Domain Lifting

Most existing Face Forgery Detection (FFD) models assume access to raw face images. In practice, under a client-server framework, private facial data may be intercepted during transmission or leaked by untrusted servers. Previous privacy protection approaches, such as anonymization, encryption, or distortion, partly mitigate leakage but often introduce severe semantic distortion, making images appear obviously protected. This alerts attackers, provoking more aggressive strategies and turning the process into a cat-and-mouse game. Moreover, these methods heavily manipulate image contents, introducing degradation or artifacts that may confuse FFD models, which rely on extremely subtle forgery traces. Inspired by advances in image steganography, which enable high-fidelity hiding and recovery, we propose a Stega}nography-based Face Forgery Detection framework (StegaFFD) to protect privacy without raising suspicion. StegaFFD hides facial images within natural cover images and directly conducts forgery detection in the steganographic domain. However, the hidden forgery-specific features are extremely subtle and interfered with by cover semantics, posing significant challenges. To address this, we propose Low-Frequency-Aware Decomposition (LFAD) and Spatial-Frequency Differential Attention (SFDA), which suppress interference from low-frequency cover semantics and enhance hidden facial feature perception. Furthermore, we introduce Steganographic Domain Alignment (SDA) to align the representations of hidden faces with those of their raw counterparts, enhancing the model's ability to perceive subtle facial cues in the steganographic domain. Extensive experiments on seven FFD datasets demonstrate that StegaFFD achieves strong imperceptibility, avoids raising attackers' suspicion, and better preserves FFD accuracy compared to existing facial privacy protection methods.

cs.CV↗

Orthogonal Weight Modification Enhances Learning Scalability and Convergence Efficiency without Gradient Backpropagation

Recognizing the substantial computational cost of backpropagation (BP), non-BP methods have emerged as attractive alternatives for efficient learning on emerging neuromorphic systems. However, existing non-BP approaches still face critical challenges in efficiency and scalability. Inspired by neural representations and dynamic mechanisms in the brain, we propose a perturbation-based approach called LOw-rank Cluster Orthogonal (LOCO) weight modification. We find that low-rank is an inherent property of perturbation-based algorithms. Under this condition, the orthogonality constraint limits the variance of the node perturbation (NP) gradient estimates and enhances the convergence efficiency. Through extensive evaluations on multiple datasets, LOCO demonstrates the capability to locally train the deepest spiking neural networks to date (more than 10 layers), while exhibiting strong continual learning ability, improved convergence efficiency, and better task performance compared to other brain-inspired non-BP algorithms. Notably, LOCO requires only O(1) parallel time complexity for weight updates, which is significantly lower than that of BP methods. This offers a promising direction for achieving high-performance, real-time, and lifelong learning on neuromorphic systems.

cs.LG↗

GeneralVLA: Generalizable Vision-Language-Action Models with Knowledge-Guided Trajectory Planning

Large foundation models have shown strong open-world generalization to complex problems in vision and language, but similar levels of generalization have yet to be achieved in robotics. One fundamental challenge is that the models exhibit limited zero-shot capability, which hampers their ability to generalize effectively to unseen scenarios. In this work, we propose GeneralVLA (Generalizable Vision-Language-Action Models with Knowledge-Guided Trajectory Planning), a hierarchical vision-language-action (VLA) model that can be more effective in utilizing the generalization of foundation models, enabling zero-shot manipulation and automatically generating data for robotics. In particular, we study a class of hierarchical VLA model where the high-level ASM (Affordance Segmentation Module) is finetuned to perceive image keypoint affordances of the scene; the mid-level 3DAgent carries out task understanding, skill knowledge, and trajectory planning to produce a 3D path indicating the desired robot end-effector trajectory. The intermediate 3D path prediction is then served as guidance to the low-level, 3D-aware control policy capable of precise manipulation. Compared to alternative approaches, our method requires no real-world robotic data collection or human demonstration, making it much more scalable to diverse tasks and viewpoints. Empirically, GeneralVLA successfully generates trajectories for 14 tasks, significantly outperforming state-of-the-art methods such as VoxPoser. The generated demonstrations can train more robust behavior cloning policies than training with human demonstrations or from data generated by VoxPoser, Scaling-up, and Code-As-Policies. We believe GeneralVLA can be the scalable method for both generating data for robotics and solving novel tasks in a zero-shot setting. Code: https://github.com/AIGeeksGroup/GeneralVLA. Website: https://aigeeksgroup.github.io/GeneralVLA.

cs.RO↗

A neural network for modeling human concept formation, understanding and communication

A remarkable capability of the human brain is to form more abstract conceptual representations from sensorimotor experiences and flexibly apply them independent of direct sensory inputs. However, the computational mechanism underlying this ability remains poorly understood. Here, we present a dual-module neural network framework, the CATS Net, to bridge this gap. Our model consists of a concept-abstraction module that extracts low-dimensional conceptual representations, and a task-solving module that performs visual judgement tasks under the hierarchical gating control of the formed concepts. The system develops transferable semantic structure based on concept representations that enable cross-network knowledge transfer through conceptual communication. Model-brain fitting analyses reveal that these emergent concept spaces align with both neurocognitive semantic model and brain response structures in the human ventral occipitotemporal cortex, while the gating mechanisms mirror that in the semantic control brain network. This work establishes a unified computational framework that can offer mechanistic insights for understanding human conceptual cognition and engineering artificial systems with human-like conceptual intelligence.

q-bio.NC↗

Energy-based Autoregressive Generation for Neural Population Dynamics

Understanding brain function represents a fundamental goal in neuroscience, with critical implications for therapeutic interventions and neural engineering applications. Computational modeling provides a quantitative framework for accelerating this understanding, but faces a fundamental trade-off between computational efficiency and high-fidelity modeling. To address this limitation, we introduce a novel Energy-based Autoregressive Generation (EAG) framework that employs an energy-based transformer learning temporal dynamics in latent space through strictly proper scoring rules, enabling efficient generation with realistic population and single-neuron spiking statistics. Evaluation on synthetic Lorenz datasets and two Neural Latents Benchmark datasets (MC_Maze and Area2_bump) demonstrates that EAG achieves state-of-the-art generation quality with substantial computational efficiency improvements, particularly over diffusion-based methods. Beyond optimal performance, conditional generation applications show two capabilities: generalizing to unseen behavioral contexts and improving motor brain-computer interface decoding accuracy using synthetic neural data. These results demonstrate the effectiveness of energy-based modeling for neural population dynamics with applications in neuroscience research and neural engineering. Code is available at https://github.com/NinglingGe/Energy-based-Autoregressive-Generation-for-Neural-Population-Dynamics.

cs.LG↗

Clustering-Based Weight Orthogonalization for Stabilizing Deep Reinforcement Learning

Reinforcement learning (RL) has made significant advancements, achieving superhuman performance in various tasks. However, RL agents often operate under the assumption of environmental stationarity, which poses a great challenge to learning efficiency since many environments are inherently non-stationary. This non-stationarity results in the requirement of millions of iterations, leading to low sample efficiency. To address this issue, we introduce the Clustering Orthogonal Weight Modified (COWM) layer, which can be integrated into the policy network of any RL algorithm and mitigate non-stationarity effectively. The COWM layer stabilizes the learning process by employing clustering techniques and a projection matrix. Our approach not only improves learning speed but also reduces gradient interference, thereby enhancing the overall learning efficiency. Empirically, the COWM outperforms state-of-the-art methods and achieves improvements of 9% and 12.6% in vision based and state-based DMControl benchmark. It also shows robustness and generality across various algorithms and tasks.

cs.LG↗

Visual Anomaly Detection for Reliable Robotic Implantation of Flexible Microelectrode Array

Flexible microelectrode (FME) implantation into brain cortex is challenging due to the deformable fiber-like structure of FME probe and the interaction with critical bio-tissue. To ensure reliability and safety, the implantation process should be monitored carefully. This paper develops an image-based anomaly detection framework based on the microscopic cameras of the robotic FME implantation system. The unified framework is utilized at four checkpoints to check the micro-needle, FME probe, hooking result, and implantation point, respectively. Exploiting the existing object localization results, the aligned regions of interest (ROIs) are extracted from raw image and input to a pretrained vision transformer (ViT). Considering the task specifications, we propose a progressive granularity patch feature sampling method to address the sensitivity-tolerance trade-off issue at different locations. Moreover, we select a part of feature channels with higher signal-to-noise ratios from the raw general ViT features, to provide better descriptors for each specific scene. The effectiveness of the proposed methods is validated with the image datasets collected from our implantation system.

cs.CV↗

ConServe: Fine-Grained GPU Harvesting for LLM Online and Offline Co-Serving

Large language model (LLM) serving demands low latency and high throughput, but high load variability makes it challenging to achieve high GPU utilization. In this paper, we identify a synergetic but overlooked opportunity to co-serve latency-critical online requests alongside latency-tolerant offline tasks such as model benchmarking. While promising, existing serving systems fail to co-serve them efficiently, as their coarse-grained resource management at the request or iteration level cannot harvest millisecond-level GPU idle cycles without introducing interference that violates online latency objectives. ConServe is a new LLM co-serving system that achieves high throughput and strong online latency guarantees by managing resources at finer granularities. ConServe introduces three techniques: (1) a latency-aware token-level scheduler that precisely sizes offline batches and tokens to fit within online latency objectives; (2) sub-iteration, layer-wise preemption that allows offline tasks to yield to online load spikes; and (3) incremental KV cache management that enables preempting and resuming offline requests at near-zero cost. Evaluations with Llama-3.1 and Qwen-2.5 models on real-world workloads show that ConServe delivers an average of 2.2$\times$ higher throughput and reduces online serving tail latency by 2.9$\times$ on average compared to state-of-the-art systems.

cs.DC↗

Flexible Tool Selection through Low-dimensional Attribute Alignment of Vision and Language

Flexible tool selection reflects a complex cognitive ability that distinguishes humans from other species, yet computational models that capture this ability remain underdeveloped. We developed a framework using low-dimensional attribute representations to bridge visual tool perception and linguistic task understanding. We constructed a comprehensive dataset (ToolNet) containing 115 common tools labeled with 13 carefully designed attributes spanning physical, functional, and psychological properties, paired with natural language scenarios describing tool usage. Visual encoders (ResNet or ViT) extract attributes from tool images while fine-tuned language models (GPT-2, LLaMA, DeepSeek) derive required attributes from task descriptions. Our approach achieves 74% accuracy in tool selection tasks-significantly outperforming direct tool matching (20%) and smaller multimodal models (21%-58%), while approaching performance of much larger models like GPT-4o (73%) with substantially fewer parameters. Human evaluation studies validate our framework's alignment with human decision-making patterns, and generalization experiments demonstrate effective performance on novel tool categories. Ablation studies revealed that manipulation-related attributes (graspability, elongation, hand-relatedness) consistently prove most critical across modalities. This work provides a parameter-efficient, interpretable solution that mimics human-like tool cognition, advancing both cognitive science understanding and practical applications in tool selection tasks.

cs.CV↗

Multi-dimensional Neural Decoding with Orthogonal Representations for Brain-Computer Interfaces

Current brain-computer interfaces primarily decode single motor variables, limiting their ability to support natural, high-bandwidth neural control that requires simultaneous extraction of multiple correlated motor dimensions. We introduce Multi-dimensional Neural Decoding (MND), a task formulation that simultaneously extracts multiple motor variables (direction, position, velocity, acceleration) from single neural population recordings. MND faces two key challenges: cross-task interference when decoding correlated motor dimensions from shared cortical representations, and generalization issues across sessions, subjects, and paradigms. To address these challenges, we propose OrthoSchema, a multi-task framework inspired by cortical orthogonal subspace organization and cognitive schema reuse. OrthoSchema enforces representation orthogonality to eliminate cross-task interference and employs selective feature reuse transfer for few-shot cross-session, subject and paradigm adaptation. Experiments on macaque motor cortex datasets demonstrate that OrthoSchema significantly improves decoding accuracy in cross-session, cross-subject and challenging cross-paradigm generalization tasks, with larger performance improvements when fine-tuning samples are limited. Ablation studies confirm the synergistic effects of all components are crucial, with OrthoSchema effectively modeling cross-task features and capturing session relationships for robust transfer. Our results provide new insights into scalable and robust neural decoding for real-world BCI applications.

q-bio.NC↗

Robust Spatiotemporal Epidemic Modeling with Integrated Adaptive Outlier Detection

In epidemic modeling, outliers can distort parameter estimation and ultimately lead to misguided public health decisions. Although there are existing robust methods that can mitigate this distortion, the ability to simultaneously detect outliers is equally vital for identifying potential disease hotspots. In this work, we introduce a robust spatiotemporal generalized additive model (RST-GAM) to address this need. We accomplish this with a mean-shift parameter to quantify and adjust for the effects of outliers and rely on adaptive Lasso regularization to model the sparsity of outlying observations. We use univariate polynomial splines and bivariate penalized splines over triangulations to estimate the functional forms and a data-thinning approach for data-adaptive weight construction. We derive a scalable proximal algorithm to estimate model parameters by minimizing a convex negative log-quasi-likelihood function. Our algorithm uses adaptive step-sizes to ensure global convergence of the resulting iterate sequence. We establish error bounds and selection consistency for the estimated parameters and demonstrate our model's effectiveness through numerical studies under various outlier scenarios. Finally, we demonstrate the practical utility of RST-GAM by analyzing county-level COVID-19 infection data in the United States, highlighting its potential to inform public health decision-making.

stat.ME↗

Visual Large Language Models Exhibit Human-Level Cognitive Flexibility in the Wisconsin Card Sorting Test

Cognitive flexibility has been extensively studied in human cognition but remains relatively unexplored in the context of Visual Large Language Models (VLLMs). This study assesses the cognitive flexibility of state-of-the-art VLLMs (GPT-4o, Gemini-1.5 Pro, and Claude-3.5 Sonnet) using the Wisconsin Card Sorting Test (WCST), a classic measure of set-shifting ability. Our results reveal that VLLMs achieve or surpass human-level set-shifting capabilities under chain-of-thought prompting with text-based inputs. However, their abilities are highly influenced by both input modality and prompting strategy. In addition, we find that through role-playing, VLLMs can simulate various functional deficits aligned with patients having impairments in cognitive flexibility, suggesting that VLLMs may possess a cognitive architecture, at least regarding the ability of set-shifting, similar to the brain. This study reveals the fact that VLLMs have already approached the human level on a key component underlying our higher cognition, and highlights the potential to use them to emulate complex brain processes.

cs.AI↗

Neural Representational Consistency Emerges from Probabilistic Neural-Behavioral Representation Alignment

Individual brains exhibit striking structural and physiological heterogeneity, yet neural circuits can generate remarkably consistent functional properties across individuals, an apparent paradox in neuroscience. While recent studies have observed preserved neural representations in motor cortex through manual alignment across subjects, the zero-shot validation of such preservation and its generalization to more cortices remain unexplored. Here we present PNBA (Probabilistic Neural-Behavioral Representation Alignment), a new framework that leverages probabilistic modeling to address hierarchical variability across trials, sessions, and subjects, with generative constraints preventing representation degeneration. By establishing reliable cross-modal representational alignment, PNBA reveals robust preserved neural representations in monkey primary motor cortex (M1) and dorsal premotor cortex (PMd) through zero-shot validation. We further establish similar representational preservation in mouse primary visual cortex (V1), reflecting a general neural basis. These findings resolve the paradox of neural heterogeneity by establishing zero-shot preserved neural representations across cortices and species, enriching neural coding insights and enabling zero-shot behavior decoding.

q-bio.NC↗

Efficient Reinforcement Learning Through Adaptively Pretrained Visual Encoder

While Reinforcement Learning (RL) agents can successfully learn to handle complex tasks, effectively generalizing acquired skills to unfamiliar settings remains a challenge. One of the reasons behind this is the visual encoders used are task-dependent, preventing effective feature extraction in different settings. To address this issue, recent studies have tried to pretrain encoders with diverse visual inputs in order to improve their performance. However, they rely on existing pretrained encoders without further exploring the impact of pretraining period. In this work, we propose APE: efficient reinforcement learning through Adaptively Pretrained visual Encoder -- a framework that utilizes adaptive augmentation strategy during the pretraining phase and extracts generalizable features with only a few interactions within the task environments in the policy learning period. Experiments are conducted across various domains, including DeepMind Control Suite, Atari Games and Memory Maze benchmarks, to verify the effectiveness of our method. Results show that mainstream RL methods, such as DreamerV3 and DrQ-v2, achieve state-of-the-art performance when equipped with APE. In addition, APE significantly improves the sampling efficiency using only visual inputs during learning, approaching the efficiency of state-based method in several control tasks. These findings demonstrate the potential of adaptive pretraining of encoder in enhancing the generalization ability and efficiency of visual RL algorithms.

cs.CV↗

Multi-Modal Latent Variables for Cross-Individual Primary Visual Cortex Modeling and Analysis

Elucidating the functional mechanisms of the primary visual cortex (V1) remains a fundamental challenge in systems neuroscience. Current computational models face two critical limitations, namely the challenge of cross-modal integration between partial neural recordings and complex visual stimuli, and the inherent variability in neural characteristics across individuals, including differences in neuron populations and firing patterns. To address these challenges, we present a multi-modal identifiable variational autoencoder (miVAE) that employs a two-level disentanglement strategy to map neural activity and visual stimuli into a unified latent space. This framework enables robust identification of cross-modal correlations through refined latent space modeling. We complement this with a novel score-based attribution analysis that traces latent variables back to their origins in the source data space. Evaluation on a large-scale mouse V1 dataset demonstrates that our method achieves state-of-the-art performance in cross-individual latent representation and alignment, without requiring subject-specific fine-tuning, and exhibits improved performance with increasing data size. Significantly, our attribution algorithm successfully identifies distinct neuronal subpopulations characterized by unique temporal patterns and stimulus discrimination properties, while simultaneously revealing stimulus regions that show specific sensitivity to edge features and luminance variations. This scalable framework offers promising applications not only for advancing V1 research but also for broader investigations in neuroscience.

q-bio.NC↗