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Shilong Yu

Publications and source records attributed to Shilong Yu.

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Baseline-referenced spatial early warning signals for tipping points on heterogeneous networks

Anticipating tipping points in complex systems is difficult because many early warning signals require long time series, which are often unavailable in practice. Spatial early warning signals offer an alternative by using a single snapshot across many interacting elements, or nodes. However, their performance in heterogeneous systems is often inconsistent because raw node states reflect both dynamical changes associated with an approaching transition and static heterogeneity induced by network structure. Here, we propose a baseline-referenced framework for spatial early warning signals. The method compares each node's state with its own baseline far from the tipping point before computing a spatial statistic, thus reducing network-structure-induced variation. We evaluate baseline-referenced variants of five classical spatial early warning signals across diverse tipping scenarios and networks, and find that baseline referencing markedly improves variance-based spatial signals. The best variants increase consistently and progressively toward tipping points across different scenarios, outperform a single-node temporal variance that requires long time series, and retain high performance even when up to 80% of nodes are omitted from observation. These results provide a practical route for using spatial early warning signals in heterogeneous networked systems when dense temporal monitoring or complete network-wide observation is infeasible, as is often the case in real applications.

physics.soc-ph

Full end-to-end diagnostic workflow automation of 3D OCT via foundation model-driven AI for retinal diseases

Optical coherence tomography (OCT) has revolutionized retinal disease diagnosis with its high-resolution and three-dimensional imaging nature, yet its full diagnostic automation in clinical practices remains constrained by multi-stage workflows and conventional single-slice single-task AI models. We present Full-process OCT-based Clinical Utility System (FOCUS), a foundation model-driven framework enabling end-to-end automation of 3D OCT retinal disease diagnosis. FOCUS sequentially performs image quality assessment with EfficientNetV2-S, followed by abnormality detection and multi-disease classification using a fine-tuned Vision Foundation Model. Crucially, FOCUS leverages a unified adaptive aggregation method to intelligently integrate 2D slices-level predictions into comprehensive 3D patient-level diagnosis. Trained and tested on 3,300 patients (40,672 slices), and externally validated on 1,345 patients (18,498 slices) across four different-tier centers and diverse OCT devices, FOCUS achieved high F1 scores for quality assessment (99.01%), abnormally detection (97.46%), and patient-level diagnosis (94.39%). Real-world validation across centers also showed stable performance (F1: 90.22%-95.24%). In human-machine comparisons, FOCUS matched expert performance in abnormality detection (F1: 95.47% vs 90.91%) and multi-disease diagnosis (F1: 93.49% vs 91.35%), while demonstrating better efficiency. FOCUS automates the image-to-diagnosis pipeline, representing a critical advance towards unmanned ophthalmology with a validated blueprint for autonomous screening to enhance population scale retinal care accessibility and efficiency.

cs.CV

Coulombic control of charge transfer in luminescent radicals with long-lived quartet states

Excitons in organic materials are emerging as an attractive platform for tunable quantum technologies. Structures with near-degenerate doublet and triplet excitations in linked trityl radical, acene and carbazole units can host quartet states. These high spin states can be coherently manipulated, and later decay radiatively via the radical doublet transition. However, this requires controlling the deexcitation pathways of all metastable states. Here we establish design rules for efficient quartet generation in luminescent radicals, using different connection arrangements of the molecular units. We discover that electronic coupling strength between these units dictates luminescence and quartet formation yields, particularly through the energetics of an acene-radical charge transfer state, which we tune Coulombically. This state acts as a source of non-radiative decay when acene-radical separation is small, but facilitates doublet-quartet spin interconversion when acene-radical separation is large. Using these rules we report a radical-carbazole-acene material with 55% luminescence yield, where 94% of emitting excitons originate from the quartet at microsecond times. This reveals the central role of molecular topology in luminescent quantum materials.

cond-mat.mtrl-sci

Using covariance of node states to design early warning signals for network dynamics

Real-life systems often experience regime shifts. An early warning signal (EWS) is a quantity that attempts to anticipate such a regime shift. Because complex systems of practical interest showing regime shifts are often dynamics on networks, a research interest is to design EWSs for networks, including determining sentinel nodes that are useful for constructing high-quality EWSs. Previous work has shown that the sample variance is a viable EWS including in the case of networks. We explore the use of the sample covariance of two nodes, or sentinel node pairs, for improving EWSs for networks. We perform analytical calculations in four-node networks and numerical simulations in larger networks to find that the sample covariance and its combination over node pairs is inferior to the sample variance and its combination over nodes; the latter are previously proposed EWSs based on sentinel node selection. The present results support the predominant use of diagonal entries of the covariance matrix (i.e., variance) as opposed to off-diagonal entries in EWS construction.

physics.soc-ph

Perfect codes in 2-valent Cayley digraphs on abelian groups

For a digraph $\Gamma$, a subset $C$ of $V(\Gamma)$ is a perfect code if $C$ is a dominating set such that every vertex of $\Gamma$ is dominated by exactly one vertex in $C$. In this paper, we classify strongly connected 2-valent Cayley digraphs on abelian groups admitting a perfect code, and determine completely all perfect codes of such digraphs.

math.CO