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Shinji Saito

Publications and source records attributed to Shinji Saito.

At least 19 recordsLinked to original sources

Unveiling Structural Bottlenecks of Dynamic Disorder in a Density-Tunable Glass Former: From Strong to Fragile Regimes

Fragility characterizes how rapidly a glass-forming liquid slows down upon supercooling, but whether strong and fragile behaviors arise from the same microscopic relaxation mechanism remains unclear. Here, we address this question using a density-tunable soft-repulsive binary mixture spanning distinct fragility regimes and analyze particle jump dynamics within the framework of dynamic disorder. Across these regimes, we show that increasing fragility leads to progressively broader cage-lifetime distributions and increasingly non-exponential survival probabilities, revealing non-Poisson cage-to-jump statistics governed by fluctuating jump rates and slowly evolving structural variables. To characterize their structural origin, we first identify the neighbor ranks most strongly coupled to jump motion using Kullback-Leibler divergence and Pearson correlation analyses. We then introduce a structural slowness parameter that combines these neighbor-distance fluctuations into a reduced slow coordinate for constructing the slow-fluctuation survival probability. A comparison with the actual survival probability shows that localized neighbor-distance fluctuations control the jump rate in the strong regime, whereas extended neighbor rearrangements become relevant in the intermediate and fragile regimes, increasing the effective dimensionality of the slow-variable space. In the fragile regime, distance-based descriptors alone become insufficient at the lowest temperature, where the Voronoi free volume captures additional cage-volume fluctuations in the rate-controlling slow variable. Point-to-set correlations grow with fragility, but the spatial extent of the slow variables exceeds the point-to-set length. These results show that fragility changes the structural bottleneck for microscopic rate fluctuations, linking dynamic disorder and multidimensional slow variables.

cond-mat.soft

Super-Arrhenius Dynamic Slowdown Revealed by Slow Variable Modulation in the Fragile Supercooled Liquid

The super-Arrhenius dynamic slowdown in fragile supercooled liquids remains one of the central unresolved questions in condensed matter physics. In this study, we analyze particle jump dynamics in a prototypical fragile glass-forming liquid, the Kob-Andersen Lennard-Jones (KALJ) model. Using the displacement of jumping particles as the reaction coordinate, we demonstrate the emergence of non-Poissonian dynamics as the temperature decreases. In the mildly supercooled regime, the outer region of the first coordination shell of a jumping particle exhibits a significant distribution shift during the jump motion. By comparing the survival probability with its slow-fluctuation limit using this distribution as a slow variable, we confirm that particles in this region modulate the jump dynamics, enhance the jump rate fluctuations, and thereby induce the dynamic slowdown as supercooling proceeds. As the temperature decreases, this behavior extends to the outer regions of the second coordination shell and beyond, intensifying the dynamic slowdown. This spatial growth of the slow variables responsible for dynamic disorder exhibits close correspondence with an increase in the static correlation length. These results provide a microscopic mechanism for the super-Arrhenius dynamic slowdown in the KALJ model.

cond-mat.soft

Nanoscale Protein Diffusion in Supercooled Cryoprotectant Solutions

Vitrification during cryopreservation requires a quantitative understanding of protein transport in deeply supercooled cryoprotectant solutions, yet direct measurements at molecular length scales remain scarce. Here, we combine X-ray Photon Correlation Spectroscopy (XPCS) and small-angle X-ray scattering (SAXS) to investigate ferritin diffusion in glycerol-water mixtures from ambient conditions down to 210 K. The measured diffusion coefficients reveal that ferritin retains a higher mobility upon cooling than expected from hydrodynamic scaling based on measurements of larger silica reference tracers, with the difference emerging below approximately 230 K. A minimal fluctuating-friction model reproduces the observed relative enhancement in diffusion, illustrating how local variations in the effective friction can give rise to such behavior. These measurements provide direct experimental benchmarks for future theoretical and simulation studies aimed at understanding molecular transport in deeply supercooled liquids approaching the glass transition.

cond-mat.soft

Enhanced particle diffusion in fluctuating binary environments

We investigate single-particle diffusion in a two-state Langevin model where the friction coefficient randomly switches between low-friction (liquid-like) and high-friction (glassy-like) states. The dynamics are governed by the ratio between the friction switching time $\tau$ and the intrinsic velocity relaxation time $\tau_0$. For fast switching ($\tau/\tau_0 \lesssim 1$) the motion is homogeneous and Brownian, whereas for slow switching ($\tau/\tau_0 \gg 1$) the particle exhibits intermittent dynamics and an enhanced diffusion coefficient. Analysis of the single-particle overlap function $Q(t)$ and the dynamic susceptibility $\chi_4(t)$ reveals decoupling of the diffusion coefficient from the average friction upon cooling, which coincides with increasing temporal dynamic heterogeneity. This minimal model provides a transparent framework for understanding single-particle transport in media with fluctuating local mobility, including supercooled liquids and phase-separated soft materials.

physics.chem-ph

Dynamic Slowdown and Spatial Correlations in Viscous Silica Melt: Perspectives from Dynamic Disorder

The dynamic slowdown in glass-forming liquids remains a central topic in condensed matter science. Here, we report a theoretical investigation of the microscopic origin of the slowdown in amorphous silica, a prototypical strong glass former with a tetrahedral network structure. Using molecular dynamics simulations, we analyze atomic jump dynamics, the elementary structural change processes underlying relaxation. We find that the jump statistics deviate from Poisson behavior with decreasing temperature, reflecting the emergence of dynamic disorder in which slowly evolving variables modulate the jump motion. The slowdown is species-dependent: for silicon, the primary constraint arises from the fourth-nearest oxygen neighbor, while at lower temperatures, the fourth-nearest silicon also becomes relevant; for oxygen, the dominant influence comes from the second-nearest silicon neighbors. As the system is cooled, the jump dynamics become increasingly slow and intermittent, proceeding in a higher-dimensional space of multiple slow variables that reflect cooperative rearrangements of the network. Species-resolved point-to-set correlations further reveal that the spatial extent of cooperative relaxation grows differently for silicon and oxygen, directly linking their relaxation asymmetry to the extent of collective motion. Together, these results provide a microscopic framework linking dynamic disorder, species-dependent constraints, and cooperative correlations, offering deeper insight into the slowdown of strong glass-forming networks.

cond-mat.soft

Unraveling the dynamic slowdown in supercooled water: The role of dynamic disorder in jump motions

When a liquid is rapidly cooled below its melting point without inducing crystallization, its dynamics slow down significantly without noticeable structural changes. Elucidating the origin of this slowdown has been a long-standing challenge. Here, we report a theoretical investigation into the mechanism of the dynamic slowdown in supercooled water, a ubiquitous yet extraordinary substance characterized by various anomalous properties arising from local density fluctuations. Using molecular dynamics simulations, we found that the jump dynamics, which are elementary structural change processes, deviate from Poisson statistics with decreasing temperature. This deviation is attributed to slow variables competing with the jump motions, i.e., dynamic disorder. The present analysis of the dynamic disorder showed that the primary slow variable is the displacement of the fourth nearest oxygen atom of a jumping molecule, which occurs in an environment created by the fluctuations of molecules outside the first hydration shell. As the temperature decreases, the jump dynamics become slow and intermittent. These intermittent dynamics are attributed to the prolonged trapping of jumping molecules within extended and stable low-density domains. As the temperature continues to decrease, the number of slow variables increases due to the increased cooperative motions. Consequently, the jump dynamics proceed in a higher-dimensional space consisting of multiple slow variables, becoming slower and more intermittent. It is then conceivable that with further decreasing temperature, the slowing and intermittency of the jump dynamics intensify, eventually culminating in a glass transition.

cond-mat.soft

Mid-infrared dispersion relations in InP based photonic crystal slabs revealed by Fourier-transform angle-resolved reflection spectroscopy

Photonic crystals (PCs) offer unique ways to control light-matter interactions. The measurement of dispersion relations is a fundamental prerequisite if we are to create novel functionalities in PC devices. Angle-resolved spectroscopic techniques are commonly used for characterizing PCs that work in the visible and near-infrared regions. However, the techniques cannot be applied to the mid- and long-wavelength infrared regions due to the limited sensitivity of infrared detectors. Here, we propose an alternative approach to measuring infrared dispersion relations. We construct a high-precision angle-resolved setup compatible with a Fourier-transform spectrometer with an angle resolution as high as 0.3 degrees. Hence, the reflection spectra are mapped to the 2D photonic band structures of In(Ga,Al)As/InP based PC slabs, which are designed as mid-infrared PC surface-emitting lasers. We identify complex PC modes with the aid of polarization selection rules derived by the group theory. Spectral analysis makes it possible to evaluate the mode quality (Q) factors. Therefore, angle-resolved reflection is a useful way of optimizing 2D PC parameters for mid-infrared devices.

physics.optics

A Case for Electron-Astrophysics

A grand-challenge problem at the forefront of physics is to understand how energy is transported and transformed in plasmas. This fundamental research priority encapsulates the conversion of plasma-flow and electromagnetic energies into particle energy, either as heat or some other form of energisation. The smallest characteristic scales, at which electron dynamics determines the plasma behaviour, are the next frontier in space and astrophysical plasma research. The analysis of astrophysical processes at these scales lies at the heart of the field of electron-astrophysics. Electron scales are the ultimate bottleneck for dissipation of plasma turbulence, which is a fundamental process not understood in the electron-kinetic regime. Since electrons are the most numerous and most mobile plasma species in fully ionised plasmas and are strongly guided by the magnetic field, their thermal properties couple very efficiently to global plasma dynamics and thermodynamics.

physics.space-ph

Exploration of vitrification of water and Kauzmann entropy through complex specific heat: A journey through 'No Man's Land'

Frequency dependent specific heat, introduced by Grest and Nagel, offers valuable insight into the vitrification of supercooled liquid. We calculate this quantity and other thermodynamic properties of supercooled liquid water by varying temperature and density across the "no man's land" all the way to the formation of amorphous ice. The calculations are aided by very long computer simulations, often more than 50 $μs$ long. Density fluctuations that arise from the proximity to a putative liquid-liquid (LL) transition at 228 K, cast a long shadow on the properties of water, both above and below the LL transition. We carry out the calculation of the quantum mechanical static and frequency-dependent specific heats by combining seminal works by Lebowitz, Percus, and Verlet and Grest and Nagel with the harmonic approximation for the density of states. The obtained values are in quantitative agreement with all available experimental and numerical results of specific heats for both supercooled water and ice. We calculate the entropy at all the state points by integrating the specific heat. We find that the quantum corrected-contributions of intermolecular vibrational entropy dominate the excess entropy of amorphous phases over the crystal over a wide range of temperature. Interestingly, the vibrational entropy lowers the Kauzmann temperature, $T_{\rm K}$, to 130 K, just below the experimental glass-to-liquid water transition temperature, $T_{\rm g}$, of 136 K and the calculated $T_{\rm g}$ of 135 K in our previous study. A straightforward extrapolation of high temperature entropy from 250 K to below however would give a much higher value of $T_{\rm K}$ $\sim$ 190 K. The calculation of Lindemann ratios places the melting of amorphous ice $\sim$ 135 K. The amorphous state exhibits an extremely short correlation length for the distance dependence of orientational correlation.

cond-mat.soft

Crucial role of fragmented and isolated defects in persistent relaxation of deeply supercooled water

Properties of water have been well elucidated for temperatures above $\sim$230 K and yet mysteries remain in the deeply supercooled region. By performing extensive molecular dynamics simulations on this supercooled region, we find that structural and dynamical instabilities are hidden in the experimentally inaccessible region between 235 K and 150 K. We find a hitherto undiscovered fragmentation from 220 K to 190 K, which is the break-up of large clusters consisting of molecules with locally distorted tetrahedral structure into small pieces with one or two isolated defects. The fragmentation leads to considerable changes in the relaxation dynamics of water. We reveal a crucial role of specific three-coordinated defects in slow but persistent structural relaxation. The presence of relaxation due to these specific defects makes water glass transition temperature $T_{\rm g}$ (= 136 K) extremely low and explains why the $T_{\rm g}$ of water is $\sim$ 1/2 of the melting temperature Tm, much lower than the commonly obeyed 2/3 rule of $T_{\rm g}/T_{\rm m}$.

cond-mat.soft

Dynamic Length Scales in Glass-Forming Liquids: A Inhomogeneous Molecular Dynamics Simulation Approach

In this work we numerically investigate a new method for the characterization of growing length scales associated with spatially heterogeneous dynamics of glass-forming liquids. This approach, motivated by the formulation of the inhomogeneous mode-coupling theory (IMCT) [Biroli G. et al. Phys. Rev. Lett. 2006 97, 195701], utilizes inhomogeneous molecular dynamics simulations in which the system is perturbed by a spatially modulated external potential. We show that the response of the two-point correlation function to the external field allows one to probe dynamic correlations. We examine the critical properties shown by this function, in particular the associated dynamic correlation length, that is found to be comparable to the one extracted from standardly-employed four-point correlation functions. Our numerical results are in qualitative agreement with IMCT predictions but suggest that one has to take into account fluctuations not included in this mean-field approach in order to reach quantitative agreement. Advantages of our approach over the more conventional one based on four-point correlation functions are discussed.

cond-mat.dis-nn

Frequency dependence of specific heat in supercooled liquid water and emergence of correlated dynamics

Molecular origin of the well-known specific heat anomaly in supercooled liquid water is investigated here by using extensive computer simulations and theoretical analyses. A rather sharp increase in the values of isobaric specific heat with lowering temperature and the weak temperature dependence of isochoric specific heat in the same range are reproduced in simulations. We calculated the spatiotemporal correlation among temperature fluctuations and examined the frequency dependent specific heat. The latter shows a rapid growth in the low frequency regime as temperature is cooled below 270 K. In order to understand the microscopic basis of this increase, we have performed a shell wise decomposition of contributions of distant molecules to the temperature fluctuations in a central molecule. This decomposition reveals the emergence, at low temperatures, of temporally slow, spatially long ranged large temperature fluctuations. The temperature fluctuation time correlation function (TFCF) can be fitted to a William-Watts stretched exponential form with the stretching parameter close to 0.6 at low temperatures, indicating highly non-exponential relaxation. Temperature dependence of the relaxation time of the correlation function can be fitted to Vogel-Fulcher-Tamermann expression which provides a quantitative measure of the fragility of the liquid. Interestingly, we find that the rapid growth in the relaxation time of TFCF with lowering temperature undergoes a sharp crossover from a markedly fragile state to a weakly fragile state around 220 K.

cond-mat.soft

Multiple length and time scales of dynamic heterogeneities in model glass-forming liquids: A systematic analysis of multi-point and multi-time correlations

We report an extensive and systematic investigation of the multi-point and multi-time correlation functions to reveal the spatio-temporal structures of dynamic heterogeneities in glass-forming liquids. Molecular dynamics simulations are carried out for the supercooled states of various prototype models of glass-forming liquids such as binary Kob-Andersen, Wahnstrom, soft-sphere, and network-forming liquids. First, we quantify the length scale of the dynamic heterogeneities utilizing the four-point correlation function. The growth of the dynamic length scale with decreasing temperature is characterized by various scaling relations that are analogous to the critical phenomena. We also examine how the growth of the length scale depends upon the model employed. Second, the four-point correlation function is extended to a three-time correlation function to characterize the temporal structures of the dynamic heterogeneities based on our previous studies. We provide comprehensive numerical results obtained from the three-time correlation function for the above models. From these calculations, we examine the time scale of the dynamic heterogeneities and determine the associated lifetime in a consistent and systematic way. Our results indicate that the lifetime of the dynamical heterogeneities becomes much longer than the alpha relaxation time determined from a two-point correlation function in fragile liquids. The decoupling between the two time scales is remarkable, particularly in supercooled states, and the time scales differ by more than an order of magnitude in a more fragile liquid. In contrast, the lifetime is shorter than the alpha-relaxation time in tetrahedral network-forming strong liquid, even at lower temperatures.

cond-mat.soft

Slow dynamics, dynamic heterogeneities, and fragility of supercooled liquids confined in random media

Using molecular dynamics simulations, we study the slow dynamics of supercooled liquids confined in a random matrix of immobile obstacles. We study the dynamical crossover from glass-like to Lorentz-gas-like behavior in terms of the density correlation function, the mean square displacement, the nonlinear dynamic susceptibility, the non-Gaussian parameter, and the fragility. Cooperative and spatially heterogeneous dynamics are suppressed as the obstacle density increases, which lead to the more Arrhenius-like behavior in the temperature dependence of the relaxation time. Our findings are qualitatively consistent with the results of recent experimental and numerical studies for various classes of spatially heterogeneous systems. We also investigate the dependence of the dynamics of mobile particles on the protocol to generate the random matrix. A reentrant transition from the arrested phase to the liquid phase as the mobile particle density {\it increases} is observed for a class of protocols. This reentrance is explained in terms of the distribution of the volume of the voids that are available to the mobile particles.

cond-mat.soft

Multi-time density correlation functions in glass-forming liquids: Probing dynamical heterogeneity and its lifetime

A multi-time extension of a density correlation function is introduced to reveal temporal information about dynamical heterogeneity in glass-forming liquids. We utilize a multi-time correlation function that is analogous to the higher-order response function analyzed in multidimensional nonlinear spectroscopy. Here, we provide comprehensive numerical results of the four-point, three-time density correlation function from longtime trajectories generated by molecular dynamics simulations of glass-forming binary soft-sphere mixtures. We confirm that the two-dimensional representations in both time and frequency domains are sensitive to the dynamical heterogeneity and that it reveals the couplings of correlated motions, which exist over a wide range of time scales. The correlated motions detected by the three-time correlation function is divided into mobile and immobile contributions that are determined from the particle displacement during the first time interval. We show that the peak positions of the correlations are in accord with the information on the non-Gaussian parameters of the van-Hove self correlation function. Furthermore, it is demonstrated that the progressive changes in the second time interval in the three-time correlation function enable us to analyze how correlations in dynamics evolve in time. From this analysis, we evaluated the lifetime of the dynamical heterogeneity and its temperature dependence systematically. Our results show that the lifetime of the dynamical heterogeneity becomes much slower than the $α$-relaxation time that is determined from the two-point density correlation function when the system is highly supercooled.

cond-mat.soft

Slow dynamics in random media: Crossover from glass to localization transition

We study slow dynamics of particles moving in a matrix of immobile obstacles using molecular dynamics simulations. The glass transition point decreases drastically as the obstacle density increases. At higher obstacle densities, the dynamics of mobile particles changes qualitatively from glass-like to a Lorentz-gas-like relaxation. This crossover is studied by density correlation functions, nonergodic parameters, mean square displacement, and nonlinear dynamic susceptibility. Our finding is qualitatively consistent with the results of recent numerical and theoretical studies on various spatially heterogeneous systems. Furthermore, we show that slow dynamics is surprisingly rich and sensitive to obstacle configurations. Especially, the reentrant transition is observed for a particular configuration, although its origin is not directly linked to the similar prediction based on mode-coupling theory.

cond-mat.soft

Multiple time scales hidden in heterogeneous dynamics of glass-forming liquids

A multi-time probing of density fluctuations is introduced to investigate hidden time scales of heterogeneous dynamics in glass-forming liquids. Molecular dynamics simulations for simple glass-forming liquids are performed, and a three-time correlation function is numerically calculated for general time intervals. It is demonstrated that the three-time correlation function is sensitive to the heterogeneous dynamics and that it reveals couplings of correlated motions over a wide range of time scales. Furthermore, the time scale of the heterogeneous dynamics $τ_{\rm hetero}$ is determined by the change in the second time interval in the three-time correlation function. The present results show that the time scale of the heterogeneous dynamics $τ_{\rm hetero}$ becomes larger than the $α$-relaxation time at low temperatures and large wavelengths. We also find a dynamical scaling relation between the time scale $τ_{\rm hetero}$ and the length scale $ξ$ of dynamical heterogeneity as $τ_{\rm hetero} \sim ξ^{z}$ with $z=3$.

cond-mat.soft

Particle-In-Cell simulations of circularly polarised Alfvén wave phase mixing: a new mechanism for electron acceleration in collisionless plasmas

In this work we used Particle-In-Cell simulations to study the interaction of circularly polarised Alfvén waves with one dimensional plasma density inhomogeneities transverse to the uniform magnetic field (phase mixing) in collisionless plasmas. In our preliminary work we reported discovery of a new electron acceleration mechanism, in which progressive distortion of the Alfvén wave front, due to the differences in local Alfvén speed, generates an oblique (nearly parallel to the magnetic field) electrostatic field. The latter accelerates electrons through the Landau resonance. Here we report a detailed study of this novel mechanism, including: (i) analysis of broadening of the ion distribution function due to the presence of Alfvén waves and (ii) the generation of compressive perturbations due to both weak non-linearity and plasma density inhomogeneity. The amplitude decay law in the inhomogeneous regions, in the kinetic regime, is demonstrated to be the same as in the MHD approximation described by Heyvaerts and Priest (1983).

astro-ph