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Shiyong Zhu

Publications and source records attributed to Shiyong Zhu.

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Distributed Pinning Set Stabilization of Large-Scale Boolean Networks

In this article, we design the distributed pinning controllers to globally stabilize a Boolean network (BN), specially a sparsely connected large-scale one, towards a preassigned subset of state space through the node-to-node message exchange. Given an appointed state set, system nodes are partitioned into two disjoint parts, which respectively gather the nodes whose states are fixed or arbitrary with respect to the given state set. With such node division, three parts of pinned nodes are selected and the state feedback controllers are accordingly designed such that the resulting BN satisfies three conditions: the states of the other nodes cannot affect the nodal dynamics of fixed-state nodes, the subgraph of network structure induced by the fixed-state nodes is acyclic, and the steady state of the subnetwork induced by the fixed-state nodes lies in the state set given beforehand. If the BN after control is acyclic, the stabilizing time is revealed to be no more than the length of the longest path in the current network structure plus one. This enables us to further design the pinning controllers with the constraint of stabilizing time. Noting that the overall procedure runs in an exponentially increasing time with respect to the largest number of functional variables in the dynamics of pinned nodes, the sparsely-connected large-scale BNs can be well addressed in a reasonable amount of time. Finally, we demonstrate the applications of our theoretical results in a T-LGL survival signal network with $29$ nodes and T-cell receptor signaling network with $90$ nodes.

eess.SY

Sensors Design for Large-Scale Boolean Networks via Pinning Observability

In this paper, a set of sensors is constructed via the pinning observability approach with the help of observability criteria given in [1] and [2], in order to make the given Boolean network (BN) be observable. Given the assumption that system states can be accessible, an efficient pinning control scheme is developed to generate an observable BN by adjusting the network structure rather than just to check system observability. Accordingly, the sensors are constructed, of which the form is consistent with that of state feedback controllers in the designed pinning control. Since this pinning control approach only utilizes node-to-node message communication instead of global state space information, the time complexity is dramatically reduced from $O(2^{2n})$ to $O(n^2+n2^d)$, where where $n$ and $d$ are respectively the node number of the considered BN and the largest in-degree of vertices in its network structure. Finally, we design the sensors for the reduced D. melanogaster segmentation polarity gene network and the T-cell receptor kinetics, respectively.

eess.SY

Polynomial-Time Algorithms for Structurally Observable Graphs by Controlling Minimal Vertices

The aim of this paper is to characterize an important class of marked digraphs, called structurally observable graphs (SOGs), and to solve two minimum realization problems. To begin with, by exploring structural observability of large-scale Boolean networks (LSBNs), an underlying type of SOGs is provided based on a recent observability criterion of conjunctive BNs. Besides, SOGs are also proved to have important applicability to structural observability of general discrete-time systems. Further, two minimum realization strategies are considered to induce an SOG from an arbitrarily given digraph by marking and controlling the minimal vertices, respectively. It indicates that one can induce an observable system by means of adding the minimal sensors or modifying the adjacency relation of minimal vertices. Finally, the structural observability of finite-field networks, and the minimum pinned node theorem for Boolean networks are displayed as application and simulation. The most salient superiority is that the designed algorithms are polynomial time and avoid exhaustive brute-force searches. It means that our results can be applied to deal with the observability of large-scale systems (particularly, LSBNs), whose observability analysis and the minimum controlled node theorem are known as intractable problems.

eess.SY

A General Control Framework for Boolean Networks

This paper focuses on proposing a general control framework for large-scale Boolean networks (\texttt{BNs}). Only by the network structure, the concept of structural controllability for \texttt{BNs} is formalized. A necessary and sufficient criterion is derived for the structural controllability of \texttt{BNs}; it can be verified with $Θ(n^2)$ time, where $n$ is the number of network nodes. An interesting conclusion is shown as that a \texttt{BN} is structurally controllable if and only if it is structurally fixed-time controllable. Afterwards, the minimum node control problem with respect to structural controllability is proved to be NP-hard for structural \texttt{BNs}. In virtue of the structurally controllable criterion, three difficult control issues can be efficiently addressed and accompanied with some advantages. In terms of the design of pinning controllers to generate a controllable \texttt{BN}, by utilizing the structurally controllable criterion, the selection procedure for the pinning node set is developed for the first time instead of just checking the controllability under the given pinning control form; the pinning controller is of distributed form, and the time complexity is $Θ(n2^{3d^{\ast}}+2(n+m)^2)$, where $m$ and $d^\ast$ are respectively the number of generators and the maximum vertex in-degree. With regard to the control design for stabilization in probability of probabilistic \texttt{BNs} (\texttt{PBNs}), an important theorem is proved to reveal the equivalence between several types of stability. The existing difficulties on the stabilization in probability are then solved to some extent via the structurally controllable criterion.

eess.SY

An improved transformation between Fibonacci FSRs and Galois FSRs

Feedback shift registers (FSRs), which have two configurations: Fibonacci and Galois, are a primitive building block in stream ciphers. In this paper, an improved transformation is proposed between Fibonacci FSRs and Galois FSRs. In the previous results, the number of stages is identical when constructing the equivalent FSRs. In this paper, there is no requirement to keep the number of stages equal for two equivalent FSRs here. More precisely, it is verified that an equivalent Galois FSR with fewer stages cannot be found for a Fibonacci FSR, but the converse is not true. Furthermore, the total number of equivalent Galois FSRs for a given Fibonacci FSR with n stages is calculated. In order to reduce the propagation time and memory, an effective algorithm is developed to find equivalent Galois FSR and is proved to own minimal operators and stages. Finally, the feasibility of our proposed strategies, to mutually transform Fibonacci FSRs and Galois FSRs, is demonstrated by numerical examples.

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