arXiv subjects

Shuchin Aeron

Publications and source records attributed to Shuchin Aeron.

At least 37 records · Page 2Linked to original sources

arXiv2024

Systematic comparison of semi-supervised and self-supervised learning for medical image classification

In typical medical image classification problems, labeled data is scarce while unlabeled data is more available. Semi-supervised learning and self-supervised learning are two different research directions that can improve accuracy by learning from extra unlabeled data. Recent methods from both directions have reported significant gains on traditional benchmarks. Yet past benchmarks do not focus on medical tasks and rarely compare self- and semi- methods together on an equal footing. Furthermore, past benchmarks often handle hyperparameter tuning suboptimally. First, they may not tune hyperparameters at all, leading to underfitting. Second, when tuning does occur, it often unrealistically uses a labeled validation set that is much larger than the training set. Therefore currently published rankings might not always corroborate with their practical utility This study contributes a systematic evaluation of self- and semi- methods with a unified experimental protocol intended to guide a practitioner with scarce overall labeled data and a limited compute budget. We answer two key questions: Can hyperparameter tuning be effective with realistic-sized validation sets? If so, when all methods are tuned well, which self- or semi-supervised methods achieve the best accuracy? Our study compares 13 representative semi- and self-supervised methods to strong labeled-set-only baselines on 4 medical datasets. From 20000+ GPU hours of computation, we provide valuable best practices to resource-constrained practitioners: hyperparameter tuning is effective, and the semi-supervised method known as MixMatch delivers the most reliable gains across 4 datasets.

cs.CV↗

arXiv2023

Hard Negative Sampling via Regularized Optimal Transport for Contrastive Representation Learning

We study the problem of designing hard negative sampling distributions for unsupervised contrastive representation learning. We propose and analyze a novel min-max framework that seeks a representation which minimizes the maximum (worst-case) generalized contrastive learning loss over all couplings (joint distributions between positive and negative samples subject to marginal constraints) and prove that the resulting min-max optimum representation will be degenerate. This provides the first theoretical justification for incorporating additional regularization constraints on the couplings. We re-interpret the min-max problem through the lens of Optimal Transport (OT) theory and utilize regularized transport couplings to control the degree of hardness of negative examples. Through experiments we demonstrate that the negative samples generated from our designed negative distribution are more similar to the anchor than those generated from the baseline negative distribution. We also demonstrate that entropic regularization yields negative sampling distributions with parametric form similar to that in a recent state-of-the-art negative sampling design and has similar performance in multiple datasets. Utilizing the uncovered connection with OT, we propose a new ground cost for designing the negative distribution and show improved performance of the learned representation on downstream tasks compared to the representation learned when using squared Euclidean cost.

cs.LG↗

arXiv2023

Estimation of entropy-regularized optimal transport maps between non-compactly supported measures

This paper addresses the problem of estimating entropy-regularized optimal transport (EOT) maps with squared-Euclidean cost between source and target measures that are subGaussian. In the case that the target measure is compactly supported or strongly log-concave, we show that for a recently proposed in-sample estimator, the expected squared $L^2$-error decays at least as fast as $O(n^{-1/3})$ where $n$ is the sample size. For the general subGaussian case we show that the expected $L^1$-error decays at least as fast as $O(n^{-1/6})$, and in both cases we have polynomial dependence on the regularization parameter. While these results are suboptimal compared to known results in the case of compactness of both the source and target measures (squared $L^2$-error converging at a rate $O(n^{-1})$) and for when the source is subGaussian while the target is compactly supported (squared $L^2$-error converging at a rate $O(n^{-1/2})$), their importance lie in eliminating the compact support requirements. The proof technique makes use of a bias-variance decomposition where the variance is controlled using standard concentration of measure results and the bias is handled by T1-transport inequalities along with sample complexity results in estimation of EOT cost under subGaussian assumptions. Our experimental results point to a looseness in controlling the variance terms and we conclude by posing several open problems.

stat.ML↗

arXiv2023

Nonparametric and Regularized Dynamical Wasserstein Barycenters for Sequential Observations

We consider probabilistic models for sequential observations which exhibit gradual transitions among a finite number of states. We are particularly motivated by applications such as human activity analysis where observed accelerometer time series contains segments representing distinct activities, which we call pure states, as well as periods characterized by continuous transition among these pure states. To capture this transitory behavior, the dynamical Wasserstein barycenter (DWB) model of Cheng et al. in 2021 [1] associates with each pure state a data-generating distribution and models the continuous transitions among these states as a Wasserstein barycenter of these distributions with dynamically evolving weights. Focusing on the univariate case where Wasserstein distances and barycenters can be computed in closed form, we extend [1] specifically relaxing the parameterization of the pure states as Gaussian distributions. We highlight issues related to the uniqueness in identifying the model parameters as well as uncertainties induced when estimating a dynamically evolving distribution from a limited number of samples. To ameliorate non-uniqueness, we introduce regularization that imposes temporal smoothness on the dynamics of the barycentric weights. A quantile-based approximation of the pure state distributions yields a finite dimensional estimation problem which we numerically solve using cyclic descent alternating between updates to the pure-state quantile functions and the barycentric weights. We demonstrate the utility of the proposed algorithm in segmenting both simulated and real world human activity time series.

cs.LG↗

arXiv2023

Barycentric-alignment and reconstruction loss minimization for domain generalization

This paper advances the theory and practice of Domain Generalization (DG) in machine learning. We consider the typical DG setting where the hypothesis is composed of a representation mapping followed by a labeling function. Within this setting, the majority of popular DG methods aim to jointly learn the representation and the labeling functions by minimizing a well-known upper bound for the classification risk in the unseen domain. In practice, however, methods based on this theoretical upper bound ignore a term that cannot be directly optimized due to its dual dependence on both the representation mapping and the unknown optimal labeling function in the unseen domain. To bridge this gap between theory and practice, we introduce a new upper bound that is free of terms having such dual dependence, resulting in a fully optimizable risk upper bound for the unseen domain. Our derivation leverages classical and recent transport inequalities that link optimal transport metrics with information-theoretic measures. Compared to previous bounds, our bound introduces two new terms: (i) the Wasserstein-2 barycenter term that aligns distributions between domains, and (ii) the reconstruction loss term that assesses the quality of representation in reconstructing the original data. Based on this new upper bound, we propose a novel DG algorithm named Wasserstein Barycenter Auto-Encoder (WBAE) that simultaneously minimizes the classification loss, the barycenter loss, and the reconstruction loss. Numerical results demonstrate that the proposed method outperforms current state-of-the-art DG algorithms on several datasets.

cs.LG↗

arXiv2023

A principled approach to model validation in domain generalization

Domain generalization aims to learn a model with good generalization ability, that is, the learned model should not only perform well on several seen domains but also on unseen domains with different data distributions. State-of-the-art domain generalization methods typically train a representation function followed by a classifier jointly to minimize both the classification risk and the domain discrepancy. However, when it comes to model selection, most of these methods rely on traditional validation routines that select models solely based on the lowest classification risk on the validation set. In this paper, we theoretically demonstrate a trade-off between minimizing classification risk and mitigating domain discrepancy, i.e., it is impossible to achieve the minimum of these two objectives simultaneously. Motivated by this theoretical result, we propose a novel model selection method suggesting that the validation process should account for both the classification risk and the domain discrepancy. We validate the effectiveness of the proposed method by numerical results on several domain generalization datasets.

cs.LG↗

arXiv2023

On Rank Energy Statistics via Optimal Transport: Continuity, Convergence, and Change Point Detection

This paper considers the use of recently proposed optimal transport-based multivariate test statistics, namely rank energy and its variant the soft rank energy derived from entropically regularized optimal transport, for the unsupervised nonparametric change point detection (CPD) problem. We show that the soft rank energy enjoys both fast rates of statistical convergence and robust continuity properties which lead to strong performance on real datasets. Our theoretical analyses remove the need for resampling and out-of-sample extensions previously required to obtain such rates. In contrast the rank energy suffers from the curse of dimensionality in statistical estimation and moreover can signal a change point from arbitrarily small perturbations, which leads to a high rate of false alarms in CPD. Additionally, under mild regularity conditions, we quantify the discrepancy between soft rank energy and rank energy in terms of the regularization parameter. Finally, we show our approach performs favorably in numerical experiments compared to several other optimal transport-based methods as well as maximum mean discrepancy.

stat.ML↗

arXiv2022

Multivariate rank via entropic optimal transport: sample efficiency and generative modeling

The framework of optimal transport has been leveraged to extend the notion of rank to the multivariate setting while preserving desirable properties of the resulting goodness-of-fit (GoF) statistics. In particular, the rank energy (RE) and rank maximum mean discrepancy (RMMD) are distribution-free under the null, exhibit high power in statistical testing, and are robust to outliers. In this paper, we point to and alleviate some of the practical shortcomings of these proposed GoF statistics, namely their high computational cost, high statistical sample complexity, and lack of differentiability with respect to the data. We show that all these practically important issues are addressed by considering entropy-regularized optimal transport maps in place of the rank map, which we refer to as the soft rank. We consequently propose two new statistics, the soft rank energy (sRE) and soft rank maximum mean discrepancy (sRMMD), which exhibit several desirable properties. Given $n$ sample data points, we provide non-asymptotic convergence rates for the sample estimate of the entropic transport map to its population version that are essentially of the order $n^{-1/2}$ when the starting measure is subgaussian and the target measure has compact support. This result is novel compared to existing results which achieve a rate of $n^{-1}$ but crucially rely on both measures having compact support. We leverage this result to demonstrate fast convergence of sample sRE and sRMMD to their population version making them useful for high-dimensional GoF testing. Our statistics are differentiable and amenable to popular machine learning frameworks that rely on gradient methods. We leverage these properties towards showcasing the utility of the proposed statistics for generative modeling on two important problems: image generation and generating valid knockoffs for controlled feature selection.

stat.ML↗

arXiv2022

Dynamical Wasserstein Barycenters for Time-series Modeling

Many time series can be modeled as a sequence of segments representing high-level discrete states, such as running and walking in a human activity application. Flexible models should describe the system state and observations in stationary "pure-state" periods as well as transition periods between adjacent segments, such as a gradual slowdown between running and walking. However, most prior work assumes instantaneous transitions between pure discrete states. We propose a dynamical Wasserstein barycentric (DWB) model that estimates the system state over time as well as the data-generating distributions of pure states in an unsupervised manner. Our model assumes each pure state generates data from a multivariate normal distribution, and characterizes transitions between states via displacement-interpolation specified by the Wasserstein barycenter. The system state is represented by a barycentric weight vector which evolves over time via a random walk on the simplex. Parameter learning leverages the natural Riemannian geometry of Gaussian distributions under the Wasserstein distance, which leads to improved convergence speeds. Experiments on several human activity datasets show that our proposed DWB model accurately learns the generating distribution of pure states while improving state estimation for transition periods compared to the commonly used linear interpolation mixture models.

cs.LG↗

arXiv2022

Trade-off between reconstruction loss and feature alignment for domain generalization

Domain generalization (DG) is a branch of transfer learning that aims to train the learning models on several seen domains and subsequently apply these pre-trained models to other unseen (unknown but related) domains. To deal with challenging settings in DG where both data and label of the unseen domain are not available at training time, the most common approach is to design the classifiers based on the domain-invariant representation features, i.e., the latent representations that are unchanged and transferable between domains. Contrary to popular belief, we show that designing classifiers based on invariant representation features alone is necessary but insufficient in DG. Our analysis indicates the necessity of imposing a constraint on the reconstruction loss induced by representation functions to preserve most of the relevant information about the label in the latent space. More importantly, we point out the trade-off between minimizing the reconstruction loss and achieving domain alignment in DG. Our theoretical results motivate a new DG framework that jointly optimizes the reconstruction loss and the domain discrepancy. Both theoretical and numerical results are provided to justify our approach.

cs.LG↗

arXiv2022

Geometric Sparse Coding in Wasserstein Space

Wasserstein dictionary learning is an unsupervised approach to learning a collection of probability distributions that generate observed distributions as Wasserstein barycentric combinations. Existing methods for Wasserstein dictionary learning optimize an objective that seeks a dictionary with sufficient representation capacity via barycentric interpolation to approximate the observed training data, but without imposing additional structural properties on the coefficients associated to the dictionary. This leads to dictionaries that densely represent the observed data, which makes interpretation of the coefficients challenging and may also lead to poor empirical performance when using the learned coefficients in downstream tasks. In contrast and motivated by sparse dictionary learning in Euclidean spaces, we propose a geometrically sparse regularizer for Wasserstein space that promotes representations of a data point using only nearby dictionary elements. We show this approach leads to sparse representations in Wasserstein space and addresses the problem of non-uniqueness of barycentric representation. Moreover, when data is generated as Wasserstein barycenters of fixed distributions, this regularizer facilitates the recovery of the generating distributions in cases that are ill-posed for unregularized Wasserstein dictionary learning. Through experimentation on synthetic and real data, we show that our geometrically regularized approach yields sparser and more interpretable dictionaries in Wasserstein space, which perform better in downstream applications.

cs.LG↗

arXiv2022

Joint covariate-alignment and concept-alignment: a framework for domain generalization

In this paper, we propose a novel domain generalization (DG) framework based on a new upper bound to the risk on the unseen domain. Particularly, our framework proposes to jointly minimize both the covariate-shift as well as the concept-shift between the seen domains for a better performance on the unseen domain. While the proposed approach can be implemented via an arbitrary combination of covariate-alignment and concept-alignment modules, in this work we use well-established approaches for distributional alignment namely, Maximum Mean Discrepancy (MMD) and covariance Alignment (CORAL), and use an Invariant Risk Minimization (IRM)-based approach for concept alignment. Our numerical results show that the proposed methods perform as well as or better than the state-of-the-art for domain generalization on several data sets.

cs.LG↗

arXiv2022

Conditional entropy minimization principle for learning domain invariant representation features

Invariance-principle-based methods such as Invariant Risk Minimization (IRM), have recently emerged as promising approaches for Domain Generalization (DG). Despite promising theory, such approaches fail in common classification tasks due to the mixing of true invariant features and spurious invariant features. To address this, we propose a framework based on the conditional entropy minimization (CEM) principle to filter-out the spurious invariant features leading to a new algorithm with a better generalization capability. We show that our proposed approach is closely related to the well-known Information Bottleneck (IB) framework and prove that under certain assumptions, entropy minimization can exactly recover the true invariant features. Our approach provides competitive classification accuracy compared to recent theoretically-principled state-of-the-art alternatives across several DG datasets.

cs.LG↗

arXiv2022

Measure Estimation in the Barycentric Coding Model

This paper considers the problem of measure estimation under the barycentric coding model (BCM), in which an unknown measure is assumed to belong to the set of Wasserstein-2 barycenters of a finite set of known measures. Estimating a measure under this model is equivalent to estimating the unknown barycentric coordinates. We provide novel geometrical, statistical, and computational insights for measure estimation under the BCM, consisting of three main results. Our first main result leverages the Riemannian geometry of Wasserstein-2 space to provide a procedure for recovering the barycentric coordinates as the solution to a quadratic optimization problem assuming access to the true reference measures. The essential geometric insight is that the parameters of this quadratic problem are determined by inner products between the optimal displacement maps from the given measure to the reference measures defining the BCM. Our second main result then establishes an algorithm for solving for the coordinates in the BCM when all the measures are observed empirically via i.i.d. samples. We prove precise rates of convergence for this algorithm -- determined by the smoothness of the underlying measures and their dimensionality -- thereby guaranteeing its statistical consistency. Finally, we demonstrate the utility of the BCM and associated estimation procedures in three application areas: (i) covariance estimation for Gaussian measures; (ii) image processing; and (iii) natural language processing.

stat.ML↗

arXiv2022

Easy Variational Inference for Categorical Models via an Independent Binary Approximation

We pursue tractable Bayesian analysis of generalized linear models (GLMs) for categorical data. Thus far, GLMs are difficult to scale to more than a few dozen categories due to non-conjugacy or strong posterior dependencies when using conjugate auxiliary variable methods. We define a new class of GLMs for categorical data called categorical-from-binary (CB) models. Each CB model has a likelihood that is bounded by the product of binary likelihoods, suggesting a natural posterior approximation. This approximation makes inference straightforward and fast; using well-known auxiliary variables for probit or logistic regression, the product of binary models admits conjugate closed-form variational inference that is embarrassingly parallel across categories and invariant to category ordering. Moreover, an independent binary model simultaneously approximates multiple CB models. Bayesian model averaging over these can improve the quality of the approximation for any given dataset. We show that our approach scales to thousands of categories, outperforming posterior estimation competitors like Automatic Differentiation Variational Inference (ADVI) and No U-Turn Sampling (NUTS) in the time required to achieve fixed prediction quality.

stat.ML↗

arXiv2022

R-local unlabeled sensing: A novel graph matching approach for multiview unlabeled sensing under local permutations

Unlabeled sensing is a linear inverse problem where the measurements are scrambled under an unknown permutation leading to loss of correspondence between the measurements and the rows of the sensing matrix. Motivated by practical tasks such as mobile sensor networks, target tracking and the pose and correspondence estimation between point clouds, we study a special case of this problem restricting the class of permutations to be local and allowing for multiple views. In this setting, namely unlabeled multi-view sensing with local permutation, previous results and algorithms are not directly applicable. In this paper, we propose a computationally efficient algorithm that creatively exploits the machinery of graph alignment and Gromov-Wasserstein alignment and leverages the multiple views to estimate the local permutations. Simulation results on synthetic data sets indicate that the proposed algorithm is scalable and applicable to the challenging regimes of low to moderate SNR.

eess.SP↗

arXiv2022

Towards Designing and Exploiting Generative Networks for Neutrino Physics Experiments using Liquid Argon Time Projection Chambers

In this paper, we show that a hybrid approach to generative modeling via combining the decoder from an autoencoder together with an explicit generative model for the latent space is a promising method for producing images of particle trajectories in a liquid argon time projection chamber (LArTPC). LArTPCs are a type of particle physics detector used by several current and future experiments focused on studies of the neutrino. We implement a Vector-Quantized Variational Autoencoder (VQ-VAE) and PixelCNN which produces images with LArTPC-like features and introduce a method to evaluate the quality of the images using a semantic segmentation that identifies important physics-based features.

hep-ex↗

arXiv2022

r-local sensing: Improved algorithm and applications

The unlabeled sensing problem is to solve a noisy linear system of equations under unknown permutation of the measurements. We study a particular case of the problem where the permutations are restricted to be r-local, i.e. the permutation matrix is block diagonal with r x r blocks. Assuming a Gaussian measurement matrix, we argue that the r-local permutation model is more challenging compared to a recent sparse permutation model. We propose a proximal alternating minimization algorithm for the general unlabeled sensing problem that provably converges to a first order stationary point. Applied to the r-local model, we show that the resulting algorithm is efficient. We validate the algorithm on synthetic and real datasets. We also formulate the 1-d unassigned distance geometry problem as an unlabeled sensing problem with a structured measurement matrix.

eess.SP↗