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Shunbo Hu

Publications and source records attributed to Shunbo Hu.

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DeePAW: A universal machine learning model for orbital-free ab initio calculations

Developing universal machine learning models for ab initio calculations is the frontier of materials cutting edge research in the new era of artificial intelligence. Here, we present the Deep Augment Way model (DeePAW) that is a universal machine learning (ML) model for orbital-free (OF) ab initio calculations, based on the density functional theory (DFT). DeePAW is currently the best OFDFT ML model according to the three criterions, 1) covering the largest number of elements, 2) having the widest application capability to diverse crystal structures, and 3) achieving the highest prediction accuracy without further fine-tuning. These scientific merits and innovations of DeePAW are stemmed from the novel SE(3)-equivariant double massage passing neuron networks. Besides predicting electron density distributions, DeePAW predicts formation energies of crystals as well and therefore paves an efficient avenue for multiscale materials modeling beyond conventional electronic structure calculation methods.

cond-mat.mtrl-sci

Epistemic Closure: Autonomous Mechanism Completion for Physically Consistent Simulation

The integration of Large Language Models (LLMs) into scientific discovery is currently hindered by the Implicit Context problem, where governing equations extracted from literature contain invisible thermodynamic assumptions (e.g., undrained conditions) that standard generative models fail to recognize. This leads to Physical Hallucination: the generation of syntactically correct solvers that faithfully execute physically invalid laws. Here, we introduce a Neuro-Symbolic Generative Agent that functions as a cognitive supervisor atop traditional numerical engines. By encapsulating physical laws into modular Constitutive Skills and leveraging latent intrinsic priors, the Agent employs a Chain-of-Thought reasoning workflow to autonomously validate, prune, and complete physical mechanisms. We demonstrate this capability on the challenge of thermal pressurization in low-permeability sandstone. While a standard literature-retrieval baseline erroneously predicts catastrophic material failure by blindly adopting a rigid "undrained" simplification, our Agent autonomously identifies the system as operating in a drained regime (Deborah number De << 1) via dimensionless scaling analysis. Consequently, it inductively completes the missing dissipation mechanism (Darcy flow) required to satisfy boundary constraints, predicting a stable stress path consistent with experimental reality. This work establishes a paradigm where AI agents transcend the role of coding assistants to act as epistemic partners, capable of reasoning about and correcting the theoretical assumptions embedded in scientific data.

cs.DB

Automated Extraction of Mechanical Constitutive Models from Scientific Literature using Large Language Models: Applications in Cultural Heritage Conservation

The preservation of cultural heritage is increasingly transitioning towards data-driven predictive maintenance and "Digital Twin" construction. However, the mechanical constitutive models required for high-fidelity simulations remain fragmented across decades of unstructured scientific literature, creating a "Data Silo" that hinders conservation engineering. To address this, we present an automated, two-stage agentic framework leveraging Large Language Models (LLMs) to extract mechanical constitutive equations, calibrated parameters, and metadata from PDF documents. The workflow employs a resource-efficient "Gatekeeper" agent for relevance filtering and a high-capability "Analyst" agent for fine-grained extraction, featuring a novel Context-Aware Symbolic Grounding mechanism to resolve mathematical ambiguities. Applied to a corpus of over 2,000 research papers, the system successfully isolated 113 core documents and constructed a structured database containing 185 constitutive model instances and over 450 calibrated parameters. The extraction precision reached 80.4\%, establishing a highly efficient "Human-in-the-loop" workflow that reduces manual data curation time by approximately 90\%. We demonstrate the system's utility through a web-based Knowledge Retrieval Platform, which enables rapid parameter discovery for computational modeling. This work transforms scattered literature into a queryable digital asset, laying the data foundation for the "Digital Material Twin" of built heritage.

cs.DB

Engineering-Oriented Symbolic Regression: LLMs as Physics Agents for Discovery of Simulation-Ready Constitutive Laws

The discovery of constitutive laws for complex materials has historically faced a dichotomy between high-fidelity data-driven approaches, which demand prohibitive full-field experimental data, and traditional engineering fitting, which often yields numerically unstable models outside calibration regimes. In this work, we propose an Engineering-Oriented Symbolic Regression (EO-SR) framework that bridges this gap by leveraging Large Language Models (LLMs) as "Physics-Informed Agents." Unlike unconstrained symbolic regression, our framework utilizes an LLM Agent to zero-shot synthesize executable physical constraints -- specifically thermodynamic consistency and frame indifference -- transforming the search process from mathematical curve-fitting into a physics-governed discovery engine. We validate this approach on the hyperelastic modeling of rubber-like materials using standard Treloar datasets. The framework autonomously identifies a novel hybrid constitutive law that combines a Mooney-Rivlin linear base with a rational locking term. This discovered model not only achieves high predictive accuracy across multi-axial deformation modes (including zero-shot prediction of pure shear) but also guarantees unconditional convexity. Finite element validation demonstrates that while industry-standard models (e.g., Ogden N=3) fail due to numerical singularities under severe transverse compression, the EO-SR-discovered model maintains robust convergence. This study establishes a generalized, low-barrier pathway for discovering simulation-ready constitutive closures that satisfy both data accuracy and rigorous physical laws.

cs.CE

Skill-Based Autonomous Agents for Material Creep Database Construction

The advancement of data-driven materials science is currently constrained by a fundamental bottleneck: the vast majority of historical experimental data remains locked within the unstructured text and rasterized figures of legacy scientific literature. Manual curation of this knowledge is prohibitively labor-intensive and prone to human error. To address this challenge, we introduce an autonomous, agent-based framework powered by Large Language Models (LLMs) designed to excavate high-fidelity datasets from scientific PDFs without human intervention. By deploying a modular "skill-based" architecture, the agent orchestrates complex cognitive tasks - including semantic filtering, multi-modal information extraction, and physics-informed validation. We demonstrate the efficacy of this framework by constructing a physically self-consistent database for material creep mechanics, a domain characterized by complex graphical trajectories and heterogeneous constitutive models. Applying the pipeline to 243 publications, the agent achieved a verified extraction success rate exceeding 90% for graphical data digitization. Crucially, we introduce a cross-modal verification protocol, demonstrating that the agent can autonomously align visually extracted data points with textually extracted constitutive parameters ($R^2 > 0.99$), ensuring the physical self-consistency of the database. This work not only provides a critical resource for investigating time-dependent deformation across diverse material systems but also establishes a scalable paradigm for autonomous knowledge acquisition, paving the way for the next generation of self-driving laboratories.

cs.DB

Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challenges

Medical image registration is critical for clinical applications, and fair benchmarking of different methods is essential for monitoring ongoing progress in the field. To date, the Learn2Reg 2020-2023 challenges have released several complementary datasets and established metrics for evaluations. Building on this foundation, the 2024 edition expands the challenge's scope to cover a wider range of registration scenarios, particularly in terms of modality diversity and task complexity, by introducing three new tasks, including large-scale multi-modal registration and unsupervised inter-subject brain registration, as well as the first microscopy-focused benchmark within Learn2Reg. The new datasets also inspired new method developments, including invertibility constraints, pyramid features, keypoints alignment and instance optimisation. Visit Learn2Reg at https://learn2reg.grand-challenge.org.

eess.IV

Beyond the LUMIR challenge: The pathway to foundational registration models

Medical image challenges have played a transformative role in advancing the field, catalyzing innovation and establishing new performance benchmarks. Image registration, a foundational task in neuroimaging, has similarly advanced through the Learn2Reg initiative. Building on this, we introduce the Large-scale Unsupervised Brain MRI Image Registration (LUMIR) challenge, a next-generation benchmark for unsupervised brain MRI registration. Previous challenges relied upon anatomical label maps, however LUMIR provides 4,014 unlabeled T1-weighted MRIs for training, encouraging biologically plausible deformation modeling through self-supervision. Evaluation includes 590 in-domain test subjects and extensive zero-shot tasks across disease populations, imaging protocols, and species. Deep learning methods consistently achieved state-of-the-art performance and produced anatomically plausible, diffeomorphic deformation fields. They outperformed several leading optimization-based methods and remained robust to most domain shifts. These findings highlight the growing maturity of deep learning in neuroimaging registration and its potential to serve as a foundation model for general-purpose medical image registration.

eess.IV

Dual-Attention Frequency Fusion at Multi-Scale for Joint Segmentation and Deformable Medical Image Registration

Deformable medical image registration is a crucial aspect of medical image analysis. In recent years, researchers have begun leveraging auxiliary tasks (such as supervised segmentation) to provide anatomical structure information for the primary registration task, addressing complex deformation challenges in medical image registration. In this work, we propose a multi-task learning framework based on multi-scale dual attention frequency fusion (DAFF-Net), which simultaneously achieves the segmentation masks and dense deformation fields in a single-step estimation. DAFF-Net consists of a global encoder, a segmentation decoder, and a coarse-to-fine pyramid registration decoder. During the registration decoding process, we design the dual attention frequency feature fusion (DAFF) module to fuse registration and segmentation features at different scales, fully leveraging the correlation between the two tasks. The DAFF module optimizes the features through global and local weighting mechanisms. During local weighting, it incorporates both high-frequency and low-frequency information to further capture the features that are critical for the registration task. With the aid of segmentation, the registration learns more precise anatomical structure information, thereby enhancing the anatomical consistency of the warped images after registration. Additionally, due to the DAFF module's outstanding ability to extract effective feature information, we extend its application to unsupervised registration. Extensive experiments on three public 3D brain magnetic resonance imaging (MRI) datasets demonstrate that the proposed DAFF-Net and its unsupervised variant outperform state-of-the-art registration methods across several evaluation metrics, demonstrating the effectiveness of our approach in deformable medical image registration.

cs.CV

Deformable Image Registration with Multi-scale Feature Fusion from Shared Encoder, Auxiliary and Pyramid Decoders

In this work, we propose a novel deformable convolutional pyramid network for unsupervised image registration. Specifically, the proposed network enhances the traditional pyramid network by adding an additional shared auxiliary decoder for image pairs. This decoder provides multi-scale high-level feature information from unblended image pairs for the registration task. During the registration process, we also design a multi-scale feature fusion block to extract the most beneficial features for the registration task from both global and local contexts. Validation results indicate that this method can capture complex deformations while achieving higher registration accuracy and maintaining smooth and plausible deformations.

cs.CV

Intrinsic Piezoelectric Anisotropy of Tetragonal ABO3 Perovskites: A High-Throughput Study

A comprehensive understand of the intrinsic piezoelectric anisotropy stemming from diverse chemical and physical factors is a key step for the rational design of highly anisotropic materials. We performed high-throughput calculations on tetragonal ABO3 perovskites to investigate the piezoelectricity and the interplay between lattice, displacement, polarization and elasticity. Among the 123 types of perovskites, the structural tetragonality is naturally divided into two categories: normal tetragonal (c/a ratio < 1.1) and super-tetragonal (c/a ratio > 1.17), exhibiting distinct ferroelectric, elastic, and piezoelectric properties. Charge analysis revealed the mechanisms underlying polarization saturation and piezoelectricity suppression in the super-tetragonal region, which also produces an inherent contradiction between high d33 and large piezoelectric anisotropy ratio |d33/d31|. The polarization axis and elastic softness direction jointly determine the maximum longitudinal piezoelectric response d33 direction. The validity and deficiencies of the widely utilized |d33/d31| ratio for representing piezoelectric anisotropy were reevaluated.

cond-mat.mtrl-sci

A comprehensive first-principle study of borophene-based nano gas sensor with gold electrodes

Using density functional theory combined with nonequilibrium Green's function method, the transport properties of borophene-based nano gas sensors with gold electrodes are calculated, and comprehensive understandings regarding the effects of gas molecules, MoS$_2$ substrate and gold electrodes to the transport properties of borophene are made. Results show that borophene-based sensors can be used to detect and distinguish CO, NO, NO$_2$ and NH$_3$ gas molecules, MoS$_2$ substrate leads to a non-linear behavior on the current-voltage characteristic, and gold electrodes provide charges to borophene and form a potential barrier, which reduced the current values compared to the current of the systems without gold electrodes. Our studies not only provide useful information on the computationally design of borophene-based gas sensors, but also help understand the transport behaviors and underlying physics of 2D metallic materials with metal electrodes.

cond-mat.mes-hall

Predicting the Structural, Electronic and Magnetic Properties of Few Atomic-layer Polar Perovskite

Density functional theory (DFT) calculations are performed to predict the structural, electronic and magnetic properties of electrically neutral or charged few-atomic-layer (AL) oxides whose parent systems are based on polar perovskite $KTaO_{3}$. Their properties vary greatly with the number of ALs ($n_{AL}$) and the stoichiometric ratio. In the few-AL limit ($n_{AL}\leqslant 14$), the even AL (EL) systems with chemical formula $(KTaO_{3})_{n}$ are semiconductors, while the odd AL (OL) systems with formula ($K_{n+1}Ta_{n}O_{3n+1}$ or $K_{n}Ta_{n+1}O_{3n+2}$) are half-metal except for the unique $KTa_{2}O_{5}$ case which is a semiconductor due to the large Peierls distortions. After reaching certain critical thickness ($n_{AL}>14$), the EL systems show ferromagnetic surface states, while ferromagnetism disappears in the OL systems. These predictions from fundamental complexity of polar perovskite when approaching the two-dimensional (2D) limit may be helpful for interpreting experimental observations later.

cond-mat.mtrl-sci

Tunable Magnetism and Insulator-Metal Transition in Bilayer Perovskites

Two-dimensional (2D) transition-metal oxide perovskites greatly expand the field of available 2D multifunctional material systems. Here, based on density functional theory calculations, we predicted the presence of ferromagnetism orders accompanying with an insulator-metal phase transition in bilayer $KNbO_{3}$ and $KTaO_{3}$ by applying strain engineering and/or external electric field. Our results will contribute to the applications of few-layer transition metal oxide perovskites in the emerging spintronics and straintronics.

cond-mat.mtrl-sci