arXiv subjects

Shuo Wang

Publications and source records attributed to Shuo Wang.

At least 469 records · Page 26Linked to original sources

arXiv2022

Reconstruction Attack on Differential Private Trajectory Protection Mechanisms

Location trajectories collected by smartphones and other devices represent a valuable data source for applications such as location-based services. Likewise, trajectories have the potential to reveal sensitive information about individuals, e.g., religious beliefs or sexual orientations. Accordingly, trajectory datasets require appropriate sanitization. Due to their strong theoretical privacy guarantees, differential private publication mechanisms receive much attention. However, the large amount of noise required to achieve differential privacy yields structural differences, e.g., ship trajectories passing over land. We propose a deep learning-based Reconstruction Attack on Protected Trajectories (RAoPT), that leverages the mentioned differences to partly reconstruct the original trajectory from a differential private release. The evaluation shows that our RAoPT model can reduce the Euclidean and Hausdorff distances between the released and original trajectories by over 68% on two real-world datasets under protection with $\varepsilon \leq 1$. In this setting, the attack increases the average Jaccard index of the trajectories' convex hulls, representing a user's activity space, by over 180%. Trained on the GeoLife dataset, the model still reduces the Euclidean and Hausdorff distances by over 60% for T-Drive trajectories protected with a state-of-the-art mechanism ($\varepsilon = 0.1$). This work highlights shortcomings of current trajectory publication mechanisms, and thus motivates further research on privacy-preserving publication schemes.

cs.CR↗

arXiv2022

The Extreme Cardiac MRI Analysis Challenge under Respiratory Motion (CMRxMotion)

The quality of cardiac magnetic resonance (CMR) imaging is susceptible to respiratory motion artifacts. The model robustness of automated segmentation techniques in face of real-world respiratory motion artifacts is unclear. This manuscript describes the design of extreme cardiac MRI analysis challenge under respiratory motion (CMRxMotion Challenge). The challenge aims to establish a public benchmark dataset to assess the effects of respiratory motion on image quality and examine the robustness of segmentation models. The challenge recruited 40 healthy volunteers to perform different breath-hold behaviors during one imaging visit, obtaining paired cine imaging with artifacts. Radiologists assessed the image quality and annotated the level of respiratory motion artifacts. For those images with diagnostic quality, radiologists further segmented the left ventricle, left ventricle myocardium and right ventricle. The images of training set (20 volunteers) along with the annotations are released to the challenge participants, to develop an automated image quality assessment model (Task 1) and an automated segmentation model (Task 2). The images of validation set (5 volunteers) are released to the challenge participants but the annotations are withheld for online evaluation of submitted predictions. Both the images and annotations of the test set (15 volunteers) were withheld and only used for offline evaluation of submitted containerized dockers. The image quality assessment task is quantitatively evaluated by the Cohen's kappa statistics and the segmentation task is evaluated by the Dice scores and Hausdorff distances.

eess.IV↗

arXiv2022

Generative Modelling of the Ageing Heart with Cross-Sectional Imaging and Clinical Data

Cardiovascular disease, the leading cause of death globally, is an age-related disease. Understanding the morphological and functional changes of the heart during ageing is a key scientific question, the answer to which will help us define important risk factors of cardiovascular disease and monitor disease progression. In this work, we propose a novel conditional generative model to describe the changes of 3D anatomy of the heart during ageing. The proposed model is flexible and allows integration of multiple clinical factors (e.g. age, gender) into the generating process. We train the model on a large-scale cross-sectional dataset of cardiac anatomies and evaluate on both cross-sectional and longitudinal datasets. The model demonstrates excellent performance in predicting the longitudinal evolution of the ageing heart and modelling its data distribution. The codes are available at https://github.com/MengyunQ/AgeHeart.

eess.IV↗

arXiv2022

Improved post-hoc probability calibration for out-of-domain MRI segmentation

Probability calibration for deep models is highly desirable in safety-critical applications such as medical imaging. It makes output probabilities of deep networks interpretable, by aligning prediction probability with the actual accuracy in test data. In image segmentation, well-calibrated probabilities allow radiologists to identify regions where model-predicted segmentations are unreliable. These unreliable predictions often occur to out-of-domain (OOD) images that are caused by imaging artifacts or unseen imaging protocols. Unfortunately, most previous calibration methods for image segmentation perform sub-optimally on OOD images. To reduce the calibration error when confronted with OOD images, we propose a novel post-hoc calibration model. Our model leverages the pixel susceptibility against perturbations at the local level, and the shape prior information at the global level. The model is tested on cardiac MRI segmentation datasets that contain unseen imaging artifacts and images from an unseen imaging protocol. We demonstrate reduced calibration errors compared with the state-of-the-art calibration algorithm.

cs.CV↗

arXiv2022

Parameterization of Cross-Token Relations with Relative Positional Encoding for Vision MLP

Vision multi-layer perceptrons (MLPs) have shown promising performance in computer vision tasks, and become the main competitor of CNNs and vision Transformers. They use token-mixing layers to capture cross-token interactions, as opposed to the multi-head self-attention mechanism used by Transformers. However, the heavily parameterized token-mixing layers naturally lack mechanisms to capture local information and multi-granular non-local relations, thus their discriminative power is restrained. To tackle this issue, we propose a new positional spacial gating unit (PoSGU). It exploits the attention formulations used in the classical relative positional encoding (RPE), to efficiently encode the cross-token relations for token mixing. It can successfully reduce the current quadratic parameter complexity $O(N^2)$ of vision MLPs to $O(N)$ and $O(1)$. We experiment with two RPE mechanisms, and further propose a group-wise extension to improve their expressive power with the accomplishment of multi-granular contexts. These then serve as the key building blocks of a new type of vision MLP, referred to as PosMLP. We evaluate the effectiveness of the proposed approach by conducting thorough experiments, demonstrating an improved or comparable performance with reduced parameter complexity. For instance, for a model trained on ImageNet1K, we achieve a performance improvement from 72.14\% to 74.02\% and a learnable parameter reduction from $19.4M$ to $18.2M$. Code could be found at https://github.com/Zhicaiwww/PosMLP.

cs.CV↗

arXiv2022

Unraveling Threat Intelligence Through the Lens of Malicious URL Campaigns

The daily deluge of alerts is a sombre reality for Security Operations Centre (SOC) personnel worldwide. They are at the forefront of an organisation's cybersecurity infrastructure, and face the unenviable task of prioritising threats amongst a flood of abstruse alerts triggered by their Security Information and Event Management (SIEM) systems. URLs found within malicious communications form the bulk of such alerts, and pinpointing pertinent patterns within them allows teams to rapidly deescalate potential or extant threats. This need for vigilance has been traditionally filled with machine-learning based log analysis tools and anomaly detection concepts. To sidestep machine learning approaches, we instead propose to analyse suspicious URLs from SIEM alerts via the perspective of malicious URL campaigns. By first grouping URLs within 311M records gathered from VirusTotal into 2.6M suspicious clusters, we thereafter discovered 77.8K malicious campaigns. Corroborating our suspicions, we found 9.9M unique URLs attributable to 18.3K multi-URL campaigns, and that worryingly, only 2.97% of campaigns were found by security vendors. We also confer insights on evasive tactics such as ever lengthier URLs and more diverse domain names, with selected case studies exposing other adversarial techniques. By characterising the concerted campaigns driving these URL alerts, we hope to inform SOC teams of current threat trends, and thus arm them with better threat intelligence.

cs.CR↗

arXiv2022

QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Scores and Benchmarking Results

Deep learning (DL) models have provided state-of-the-art performance in various medical imaging benchmarking challenges, including the Brain Tumor Segmentation (BraTS) challenges. However, the task of focal pathology multi-compartment segmentation (e.g., tumor and lesion sub-regions) is particularly challenging, and potential errors hinder translating DL models into clinical workflows. Quantifying the reliability of DL model predictions in the form of uncertainties could enable clinical review of the most uncertain regions, thereby building trust and paving the way toward clinical translation. Several uncertainty estimation methods have recently been introduced for DL medical image segmentation tasks. Developing scores to evaluate and compare the performance of uncertainty measures will assist the end-user in making more informed decisions. In this study, we explore and evaluate a score developed during the BraTS 2019 and BraTS 2020 task on uncertainty quantification (QU-BraTS) and designed to assess and rank uncertainty estimates for brain tumor multi-compartment segmentation. This score (1) rewards uncertainty estimates that produce high confidence in correct assertions and those that assign low confidence levels at incorrect assertions, and (2) penalizes uncertainty measures that lead to a higher percentage of under-confident correct assertions. We further benchmark the segmentation uncertainties generated by 14 independent participating teams of QU-BraTS 2020, all of which also participated in the main BraTS segmentation task. Overall, our findings confirm the importance and complementary value that uncertainty estimates provide to segmentation algorithms, highlighting the need for uncertainty quantification in medical image analyses. Finally, in favor of transparency and reproducibility, our evaluation code is made publicly available at: https://github.com/RagMeh11/QU-BraTS.

eess.IV↗

arXiv2022

Long-term Spatio-temporal Forecasting via Dynamic Multiple-Graph Attention

Many real-world ubiquitous applications, such as parking recommendations and air pollution monitoring, benefit significantly from accurate long-term spatio-temporal forecasting (LSTF). LSTF makes use of long-term dependency between spatial and temporal domains, contextual information, and inherent pattern in the data. Recent studies have revealed the potential of multi-graph neural networks (MGNNs) to improve prediction performance. However, existing MGNN methods cannot be directly applied to LSTF due to several issues: the low level of generality, insufficient use of contextual information, and the imbalanced graph fusion approach. To address these issues, we construct new graph models to represent the contextual information of each node and the long-term spatio-temporal data dependency structure. To fuse the information across multiple graphs, we propose a new dynamic multi-graph fusion module to characterize the correlations of nodes within a graph and the nodes across graphs via the spatial attention and graph attention mechanisms. Furthermore, we introduce a trainable weight tensor to indicate the importance of each node in different graphs. Extensive experiments on two large-scale datasets demonstrate that our proposed approaches significantly improve the performance of existing graph neural network models in LSTF prediction tasks.

cs.LG↗

arXiv2022

TANet: Transformer-based Asymmetric Network for RGB-D Salient Object Detection

Existing RGB-D SOD methods mainly rely on a symmetric two-stream CNN-based network to extract RGB and depth channel features separately. However, there are two problems with the symmetric conventional network structure: first, the ability of CNN in learning global contexts is limited; second, the symmetric two-stream structure ignores the inherent differences between modalities. In this paper, we propose a Transformer-based asymmetric network (TANet) to tackle the issues mentioned above. We employ the powerful feature extraction capability of Transformer (PVTv2) to extract global semantic information from RGB data and design a lightweight CNN backbone (LWDepthNet) to extract spatial structure information from depth data without pre-training. The asymmetric hybrid encoder (AHE) effectively reduces the number of parameters in the model while increasing speed without sacrificing performance. Then, we design a cross-modal feature fusion module (CMFFM), which enhances and fuses RGB and depth features with each other. Finally, we add edge prediction as an auxiliary task and propose an edge enhancement module (EEM) to generate sharper contours. Extensive experiments demonstrate that our method achieves superior performance over 14 state-of-the-art RGB-D methods on six public datasets. Our code will be released at https://github.com/lc012463/TANet.

cs.CV↗

arXiv2022

Trichomonas Vaginalis Segmentation in Microscope Images

Trichomoniasis is a common infectious disease with high incidence caused by the parasite Trichomonas vaginalis, increasing the risk of getting HIV in humans if left untreated. Automated detection of Trichomonas vaginalis from microscopic images can provide vital information for the diagnosis of trichomoniasis. However, accurate Trichomonas vaginalis segmentation (TVS) is a challenging task due to the high appearance similarity between the Trichomonas and other cells (e.g., leukocyte), the large appearance variation caused by their motility, and, most importantly, the lack of large-scale annotated data for deep model training. To address these challenges, we elaborately collected the first large-scale Microscopic Image dataset of Trichomonas Vaginalis, named TVMI3K, which consists of 3,158 images covering Trichomonas of various appearances in diverse backgrounds, with high-quality annotations including object-level mask labels, object boundaries, and challenging attributes. Besides, we propose a simple yet effective baseline, termed TVNet, to automatically segment Trichomonas from microscopic images, including high-resolution fusion and foreground-background attention modules. Extensive experiments demonstrate that our model achieves superior segmentation performance and outperforms various cutting-edge object detection models both quantitatively and qualitatively, making it a promising framework to promote future research in TVS tasks. The dataset and results will be publicly available at: https://github.com/CellRecog/cellRecog.

cs.CV↗

arXiv2022

Boundary-Guided Camouflaged Object Detection

Camouflaged object detection (COD), segmenting objects that are elegantly blended into their surroundings, is a valuable yet challenging task. Existing deep-learning methods often fall into the difficulty of accurately identifying the camouflaged object with complete and fine object structure. To this end, in this paper, we propose a novel boundary-guided network (BGNet) for camouflaged object detection. Our method explores valuable and extra object-related edge semantics to guide representation learning of COD, which forces the model to generate features that highlight object structure, thereby promoting camouflaged object detection of accurate boundary localization. Extensive experiments on three challenging benchmark datasets demonstrate that our BGNet significantly outperforms the existing 18 state-of-the-art methods under four widely-used evaluation metrics. Our code is publicly available at: https://github.com/thograce/BGNet.

cs.CV↗

arXiv2022

A Universal Framework for Reconstructing Complex Networks and Node Dynamics from Discrete or Continuous Dynamics Data

Many dynamical processes of complex systems can be understood as the dynamics of a group of nodes interacting on a given network structure. However, finding such interaction structure and node dynamics from time series of node behaviours is tough. Conventional methods focus on either network structure inference task or dynamics reconstruction problem, very few of them can work well on both. This paper proposes a universal framework for reconstructing network structure and node dynamics at the same time from observed time-series data of nodes. We use a differentiable Bernoulli sampling process to generate a candidate network structure, and use neural networks to simulate the node dynamics based on the candidate network. We then adjust all the parameters with a stochastic gradient descent algorithm to maximize the likelihood function defined on the data. The experiments show that our model can recover various network structures and node dynamics at the same time with high accuracy. It can also work well on binary, discrete and continuous time-series data, and the reconstruction results are robust against noise and missing information.

physics.soc-ph↗

arXiv2022

Enhancing MR Image Segmentation with Realistic Adversarial Data Augmentation

The success of neural networks on medical image segmentation tasks typically relies on large labeled datasets for model training. However, acquiring and manually labeling a large medical image set is resource-intensive, expensive, and sometimes impractical due to data sharing and privacy issues. To address this challenge, we propose AdvChain, a generic adversarial data augmentation framework, aiming at improving both the diversity and effectiveness of training data for medical image segmentation tasks. AdvChain augments data with dynamic data augmentation, generating randomly chained photo-metric and geometric transformations to resemble realistic yet challenging imaging variations to expand training data. By jointly optimizing the data augmentation model and a segmentation network during training, challenging examples are generated to enhance network generalizability for the downstream task. The proposed adversarial data augmentation does not rely on generative networks and can be used as a plug-in module in general segmentation networks. It is computationally efficient and applicable for both low-shot supervised and semi-supervised learning. We analyze and evaluate the method on two MR image segmentation tasks: cardiac segmentation and prostate segmentation with limited labeled data. Results show that the proposed approach can alleviate the need for labeled data while improving model generalization ability, indicating its practical value in medical imaging applications.

eess.IV↗

arXiv2022

The 6th AI City Challenge

The 6th edition of the AI City Challenge specifically focuses on problems in two domains where there is tremendous unlocked potential at the intersection of computer vision and artificial intelligence: Intelligent Traffic Systems (ITS), and brick and mortar retail businesses. The four challenge tracks of the 2022 AI City Challenge received participation requests from 254 teams across 27 countries. Track 1 addressed city-scale multi-target multi-camera (MTMC) vehicle tracking. Track 2 addressed natural-language-based vehicle track retrieval. Track 3 was a brand new track for naturalistic driving analysis, where the data were captured by several cameras mounted inside the vehicle focusing on driver safety, and the task was to classify driver actions. Track 4 was another new track aiming to achieve retail store automated checkout using only a single view camera. We released two leader boards for submissions based on different methods, including a public leader board for the contest, where no use of external data is allowed, and a general leader board for all submitted results. The top performance of participating teams established strong baselines and even outperformed the state-of-the-art in the proposed challenge tracks.

cs.CV↗

arXiv2022

Generative Myocardial Motion Tracking via Latent Space Exploration with Biomechanics-informed Prior

Myocardial motion and deformation are rich descriptors that characterize cardiac function. Image registration, as the most commonly used technique for myocardial motion tracking, is an ill-posed inverse problem which often requires prior assumptions on the solution space. In contrast to most existing approaches which impose explicit generic regularization such as smoothness, in this work we propose a novel method that can implicitly learn an application-specific biomechanics-informed prior and embed it into a neural network-parameterized transformation model. Particularly, the proposed method leverages a variational autoencoder-based generative model to learn a manifold for biomechanically plausible deformations. The motion tracking then can be performed via traversing the learnt manifold to search for the optimal transformations while considering the sequence information. The proposed method is validated on three public cardiac cine MRI datasets with comprehensive evaluations. The results demonstrate that the proposed method can outperform other approaches, yielding higher motion tracking accuracy with reasonable volume preservation and better generalizability to varying data distributions. It also enables better estimates of myocardial strains, which indicates the potential of the method in characterizing spatiotemporal signatures for understanding cardiovascular diseases.

eess.IV↗

arXiv2022

Suggestive Annotation of Brain MR Images with Gradient-guided Sampling

Machine learning has been widely adopted for medical image analysis in recent years given its promising performance in image segmentation and classification tasks. The success of machine learning, in particular supervised learning, depends on the availability of manually annotated datasets. For medical imaging applications, such annotated datasets are not easy to acquire, it takes a substantial amount of time and resource to curate an annotated medical image set. In this paper, we propose an efficient annotation framework for brain MR images that can suggest informative sample images for human experts to annotate. We evaluate the framework on two different brain image analysis tasks, namely brain tumour segmentation and whole brain segmentation. Experiments show that for brain tumour segmentation task on the BraTS 2019 dataset, training a segmentation model with only 7% suggestively annotated image samples can achieve a performance comparable to that of training on the full dataset. For whole brain segmentation on the MALC dataset, training with 42% suggestively annotated image samples can achieve a comparable performance to training on the full dataset. The proposed framework demonstrates a promising way to save manual annotation cost and improve data efficiency in medical imaging applications.

cs.CV↗

arXiv2022

Generating Semantic Adversarial Examples via Feature Manipulation

The vulnerability of deep neural networks to adversarial attacks has been widely demonstrated (e.g., adversarial example attacks). Traditional attacks perform unstructured pixel-wise perturbation to fool the classifier. An alternative approach is to have perturbations in the latent space. However, such perturbations are hard to control due to the lack of interpretability and disentanglement. In this paper, we propose a more practical adversarial attack by designing structured perturbation with semantic meanings. Our proposed technique manipulates the semantic attributes of images via the disentangled latent codes. The intuition behind our technique is that images in similar domains have some commonly shared but theme-independent semantic attributes, e.g. thickness of lines in handwritten digits, that can be bidirectionally mapped to disentangled latent codes. We generate adversarial perturbation by manipulating a single or a combination of these latent codes and propose two unsupervised semantic manipulation approaches: vector-based disentangled representation and feature map-based disentangled representation, in terms of the complexity of the latent codes and smoothness of the reconstructed images. We conduct extensive experimental evaluations on real-world image data to demonstrate the power of our attacks for black-box classifiers. We further demonstrate the existence of a universal, image-agnostic semantic adversarial example.

cs.LG↗

arXiv2022

DcnnGrasp: Towards Accurate Grasp Pattern Recognition with Adaptive Regularizer Learning

The task of grasp pattern recognition aims to derive the applicable grasp types of an object according to the visual information. Current state-of-the-art methods ignore category information of objects which is crucial for grasp pattern recognition. This paper presents a novel dual-branch convolutional neural network (DcnnGrasp) to achieve joint learning of object category classification and grasp pattern recognition. DcnnGrasp takes object category classification as an auxiliary task to improve the effectiveness of grasp pattern recognition. Meanwhile, a new loss function called joint cross-entropy with an adaptive regularizer is derived through maximizing a posterior, which significantly improves the model performance. Besides, based on the new loss function, a training strategy is proposed to maximize the collaborative learning of the two tasks. The experiment was performed on five household objects datasets including the RGB-D Object dataset, Hit-GPRec dataset, Amsterdam library of object images (ALOI), Columbia University Image Library (COIL-100), and MeganePro dataset 1. The experimental results demonstrated that the proposed method can achieve competitive performance on grasp pattern recognition with several state-of-the-art methods. Specifically, our method even outperformed the second-best one by nearly 15% in terms of global accuracy for the case of testing a novel object on the RGB-D Object dataset.

cs.CV↗