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Shwetak Patel

Publications and source records attributed to Shwetak Patel.

At least 55 records · Page 3Linked to original sources
arXiv2024

Towards a Personal Health Large Language Model

In health, most large language model (LLM) research has focused on clinical tasks. However, mobile and wearable devices, which are rarely integrated into such tasks, provide rich, longitudinal data for personal health monitoring. Here we present Personal Health Large Language Model (PH-LLM), fine-tuned from Gemini for understanding and reasoning over numerical time-series personal health data. We created and curated three datasets that test 1) production of personalized insights and recommendations from sleep patterns, physical activity, and physiological responses, 2) expert domain knowledge, and 3) prediction of self-reported sleep outcomes. For the first task we designed 857 case studies in collaboration with domain experts to assess real-world scenarios in sleep and fitness. Through comprehensive evaluation of domain-specific rubrics, we observed that Gemini Ultra 1.0 and PH-LLM are not statistically different from expert performance in fitness and, while experts remain superior for sleep, fine-tuning PH-LLM provided significant improvements in using relevant domain knowledge and personalizing information for sleep insights. We evaluated PH-LLM domain knowledge using multiple choice sleep medicine and fitness examinations. PH-LLM achieved 79% on sleep and 88% on fitness, exceeding average scores from a sample of human experts. Finally, we trained PH-LLM to predict self-reported sleep quality outcomes from textual and multimodal encoding representations of wearable data, and demonstrate that multimodal encoding is required to match performance of specialized discriminative models. Although further development and evaluation are necessary in the safety-critical personal health domain, these results demonstrate both the broad knowledge and capabilities of Gemini models and the benefit of contextualizing physiological data for personal health applications as done with PH-LLM.

cs.AI↗
arXiv2024

Biodegradable Interactive Materials

The sense of touch is fundamental to how we interact with the physical and digital world. Conventional interactive surfaces and tactile interfaces use electronic sensors embedded into objects, however this approach poses serious challenges both for environmental sustainability and a future of truly ubiquitous interaction systems where information is encoded into everyday objects. In this work, we present Biodegradable Interactive Materials: backyard-compostable interactive interfaces that leverage information encoded in material properties. Inspired by natural systems, we propose an architecture that programmatically encodes multidimensional information into materials themselves and combines them with wearable devices that extend human senses to perceive the embedded data. We combine unrefined biological matter from plants and algae like chlorella with natural minerals like graphite and magnetite to produce materials with varying electrical, magnetic, and surface properties. We perform in-depth analysis using physics models, computational simulations, and real-world experiments to characterize their information density and develop decoding methods. Our passive, chip-less materials can robustly encode 12 bits of information, equivalent to 4096 unique classes. We further develop wearable device prototypes that can decode this information during touch interactions using off-the-shelf sensors. We demonstrate sample applications such as customized buttons, tactile maps, and interactive surfaces. We further demonstrate the natural degradation of these interactive materials in degrade outdoors within 21 days and perform a comparative environmental analysis of the benefits of this approach.

cs.HC↗
arXiv2024

LabelAId: Just-in-time AI Interventions for Improving Human Labeling Quality and Domain Knowledge in Crowdsourcing Systems

Crowdsourcing platforms have transformed distributed problem-solving, yet quality control remains a persistent challenge. Traditional quality control measures, such as prescreening workers and refining instructions, often focus solely on optimizing economic output. This paper explores just-in-time AI interventions to enhance both labeling quality and domain-specific knowledge among crowdworkers. We introduce LabelAId, an advanced inference model combining Programmatic Weak Supervision (PWS) with FT-Transformers to infer label correctness based on user behavior and domain knowledge. Our technical evaluation shows that our LabelAId pipeline consistently outperforms state-of-the-art ML baselines, improving mistake inference accuracy by 36.7% with 50 downstream samples. We then implemented LabelAId into Project Sidewalk, an open-source crowdsourcing platform for urban accessibility. A between-subjects study with 34 participants demonstrates that LabelAId significantly enhances label precision without compromising efficiency while also increasing labeler confidence. We discuss LabelAId's success factors, limitations, and its generalizability to other crowdsourced science domains.

cs.HC↗
arXiv2024

HeAR -- Health Acoustic Representations

Health acoustic sounds such as coughs and breaths are known to contain useful health signals with significant potential for monitoring health and disease, yet are underexplored in the medical machine learning community. The existing deep learning systems for health acoustics are often narrowly trained and evaluated on a single task, which is limited by data and may hinder generalization to other tasks. To mitigate these gaps, we develop HeAR, a scalable self-supervised learning-based deep learning system using masked autoencoders trained on a large dataset of 313 million two-second long audio clips. Through linear probes, we establish HeAR as a state-of-the-art health audio embedding model on a benchmark of 33 health acoustic tasks across 6 datasets. By introducing this work, we hope to enable and accelerate further health acoustics research.

cs.LG↗
arXiv2024

Demographic Bias of Expert-Level Vision-Language Foundation Models in Medical Imaging

Advances in artificial intelligence (AI) have achieved expert-level performance in medical imaging applications. Notably, self-supervised vision-language foundation models can detect a broad spectrum of pathologies without relying on explicit training annotations. However, it is crucial to ensure that these AI models do not mirror or amplify human biases, thereby disadvantaging historically marginalized groups such as females or Black patients. The manifestation of such biases could systematically delay essential medical care for certain patient subgroups. In this study, we investigate the algorithmic fairness of state-of-the-art vision-language foundation models in chest X-ray diagnosis across five globally-sourced datasets. Our findings reveal that compared to board-certified radiologists, these foundation models consistently underdiagnose marginalized groups, with even higher rates seen in intersectional subgroups, such as Black female patients. Such demographic biases present over a wide range of pathologies and demographic attributes. Further analysis of the model embedding uncovers its significant encoding of demographic information. Deploying AI systems with these biases in medical imaging can intensify pre-existing care disparities, posing potential challenges to equitable healthcare access and raising ethical questions about their clinical application.

cs.CY↗
arXiv2023

Towards Accurate Differential Diagnosis with Large Language Models

An accurate differential diagnosis (DDx) is a cornerstone of medical care, often reached through an iterative process of interpretation that combines clinical history, physical examination, investigations and procedures. Interactive interfaces powered by Large Language Models (LLMs) present new opportunities to both assist and automate aspects of this process. In this study, we introduce an LLM optimized for diagnostic reasoning, and evaluate its ability to generate a DDx alone or as an aid to clinicians. 20 clinicians evaluated 302 challenging, real-world medical cases sourced from the New England Journal of Medicine (NEJM) case reports. Each case report was read by two clinicians, who were randomized to one of two assistive conditions: either assistance from search engines and standard medical resources, or LLM assistance in addition to these tools. All clinicians provided a baseline, unassisted DDx prior to using the respective assistive tools. Our LLM for DDx exhibited standalone performance that exceeded that of unassisted clinicians (top-10 accuracy 59.1% vs 33.6%, [p = 0.04]). Comparing the two assisted study arms, the DDx quality score was higher for clinicians assisted by our LLM (top-10 accuracy 51.7%) compared to clinicians without its assistance (36.1%) (McNemar's Test: 45.7, p < 0.01) and clinicians with search (44.4%) (4.75, p = 0.03). Further, clinicians assisted by our LLM arrived at more comprehensive differential lists than those without its assistance. Our study suggests that our LLM for DDx has potential to improve clinicians' diagnostic reasoning and accuracy in challenging cases, meriting further real-world evaluation for its ability to empower physicians and widen patients' access to specialist-level expertise.

cs.CY↗
arXiv2023

rPPG-Toolbox: Deep Remote PPG Toolbox

Camera-based physiological measurement is a fast growing field of computer vision. Remote photoplethysmography (rPPG) utilizes imaging devices (e.g., cameras) to measure the peripheral blood volume pulse (BVP) via photoplethysmography, and enables cardiac measurement via webcams and smartphones. However, the task is non-trivial with important pre-processing, modeling, and post-processing steps required to obtain state-of-the-art results. Replication of results and benchmarking of new models is critical for scientific progress; however, as with many other applications of deep learning, reliable codebases are not easy to find or use. We present a comprehensive toolbox, rPPG-Toolbox, that contains unsupervised and supervised rPPG models with support for public benchmark datasets, data augmentation, and systematic evaluation: \url{https://github.com/ubicomplab/rPPG-Toolbox}

cs.CV↗
arXiv2023

Exploring and Characterizing Large Language Models For Embedded System Development and Debugging

Large language models (LLMs) have shown remarkable abilities to generate code, however their ability to develop software for embedded systems, which requires cross-domain knowledge of hardware and software has not been studied. In this paper we develop an extensible, open source hardware-in-the-loop framework to systematically evaluate leading LLMs (GPT-3.5, GPT-4, PaLM 2) to assess their capabilities and limitations for embedded system development. We observe through our study that even when these tools fail to produce working code, they consistently generate helpful reasoning about embedded design tasks. We leverage this finding to study how human programmers interact with these tools, and develop an human-AI based software engineering workflow for building embedded systems. Our evaluation platform for verifying LLM generated programs uses sensor actuator pairs for physical evaluation. We compare all three models with N=450 experiments and find surprisingly that GPT-4 especially shows an exceptional level of cross-domain understanding and reasoning, in some cases generating fully correct programs from a single prompt. In N=50 trials, GPT-4 produces functional I2C interfaces 66% of the time. GPT-4 also produces register-level drivers, code for LoRa communication, and context-specific power optimizations for an nRF52 program resulting in over 740x current reduction to 12.2uA. We also characterize the models' limitations to develop a generalizable human-AI workflow for using LLMs in embedded system development. We evaluate our workflow with 15 users including novice and expert programmers. We find that our workflow improves productivity for all users and increases the success rate for building a LoRa environmental sensor from 25% to 100%, including for users with zero hardware or C/C++ experience.

cs.SE↗
arXiv2023

BigSmall: Efficient Multi-Task Learning for Disparate Spatial and Temporal Physiological Measurements

Understanding of human visual perception has historically inspired the design of computer vision architectures. As an example, perception occurs at different scales both spatially and temporally, suggesting that the extraction of salient visual information may be made more effective by paying attention to specific features at varying scales. Visual changes in the body due to physiological processes also occur at different scales and with modality-specific characteristic properties. Inspired by this, we present BigSmall, an efficient architecture for physiological and behavioral measurement. We present the first joint camera-based facial action, cardiac, and pulmonary measurement model. We propose a multi-branch network with wrapping temporal shift modules that yields both accuracy and efficiency gains. We observe that fusing low-level features leads to suboptimal performance, but that fusing high level features enables efficiency gains with negligible loss in accuracy. Experimental results demonstrate that BigSmall significantly reduces the computational costs. Furthermore, compared to existing task-specific models, BigSmall achieves comparable or better results on multiple physiological measurement tasks simultaneously with a unified model.

cs.CV↗
arXiv2023

DeltaLCA: Comparative Life-Cycle Assessment for Electronics Design

Reducing the environmental footprint of electronics and computing devices requires new tools that empower designers to make informed decisions about sustainability during the design process itself. This is not possible with current tools for life cycle assessment (LCA) which require substantial domain expertise and time to evaluate the numerous chips and other components that make up a device. We observe first that informed decision-making does not require absolute metrics and can instead be done by comparing designs. Second, we can use domain-specific heuristics to perform these comparisons. We combine these insights to develop DeltaLCA, an open-source interactive design tool that addresses the dual challenges of automating life cycle inventory generation and data availability by performing comparative analyses of electronics designs. Users can upload standard design files from Electronic Design Automation (EDA) software and the tool will guide them through determining which one has greater carbon footprint. DeltaLCA leverages electronics-specific LCA datasets and heuristics and tries to automatically rank the two designs, prompting users to provide additional information only when necessary. We show through case studies DeltaLCA achieves the same result as evaluating full LCAs, and that it accelerates LCA comparisons from eight expert-hours to a single click for devices with ~30 components, and 15 minutes for more complex devices with ~100 components.

cs.HC↗
arXiv2023

Training Robust Deep Physiological Measurement Models with Synthetic Video-based Data

Recent advances in supervised deep learning techniques have demonstrated the possibility to remotely measure human physiological vital signs (e.g., photoplethysmograph, heart rate) just from facial videos. However, the performance of these methods heavily relies on the availability and diversity of real labeled data. Yet, collecting large-scale real-world data with high-quality labels is typically challenging and resource intensive, which also raises privacy concerns when storing personal bio-metric data. Synthetic video-based datasets (e.g., SCAMPS \cite{mcduff2022scamps}) with photo-realistic synthesized avatars are introduced to alleviate the issues while providing high-quality synthetic data. However, there exists a significant gap between synthetic and real-world data, which hinders the generalization of neural models trained on these synthetic datasets. In this paper, we proposed several measures to add real-world noise to synthetic physiological signals and corresponding facial videos. We experimented with individual and combined augmentation methods and evaluated our framework on three public real-world datasets. Our results show that we were able to reduce the average MAE from 6.9 to 2.0.

cs.CV↗
arXiv2023

Motion Matters: Neural Motion Transfer for Better Camera Physiological Measurement

Machine learning models for camera-based physiological measurement can have weak generalization due to a lack of representative training data. Body motion is one of the most significant sources of noise when attempting to recover the subtle cardiac pulse from a video. We explore motion transfer as a form of data augmentation to introduce motion variation while preserving physiological changes of interest. We adapt a neural video synthesis approach to augment videos for the task of remote photoplethysmography (rPPG) and study the effects of motion augmentation with respect to 1) the magnitude and 2) the type of motion. After training on motion-augmented versions of publicly available datasets, we demonstrate a 47% improvement over existing inter-dataset results using various state-of-the-art methods on the PURE dataset. We also present inter-dataset results on five benchmark datasets to show improvements of up to 79% using TS-CAN, a neural rPPG estimation method. Our findings illustrate the usefulness of motion transfer as a data augmentation technique for improving the generalization of models for camera-based physiological sensing. We release our code for using motion transfer as a data augmentation technique on three publicly available datasets, UBFC-rPPG, PURE, and SCAMPS, and models pre-trained on motion-augmented data here: https://motion-matters.github.io/

cs.CV↗
arXiv2023

MMTSA: Multimodal Temporal Segment Attention Network for Efficient Human Activity Recognition

Multimodal sensors provide complementary information to develop accurate machine-learning methods for human activity recognition (HAR), but introduce significantly higher computational load, which reduces efficiency. This paper proposes an efficient multimodal neural architecture for HAR using an RGB camera and inertial measurement units (IMUs) called Multimodal Temporal Segment Attention Network (MMTSA). MMTSA first transforms IMU sensor data into a temporal and structure-preserving gray-scale image using the Gramian Angular Field (GAF), representing the inherent properties of human activities. MMTSA then applies a multimodal sparse sampling method to reduce data redundancy. Lastly, MMTSA adopts an inter-segment attention module for efficient multimodal fusion. Using three well-established public datasets, we evaluated MMTSA's effectiveness and efficiency in HAR. Results show that our method achieves superior performance improvements 11.13% of cross-subject F1-score on the MMAct dataset than the previous state-of-the-art (SOTA) methods. The ablation study and analysis suggest that MMTSA's effectiveness in fusing multimodal data for accurate HAR. The efficiency evaluation on an edge device showed that MMTSA achieved significantly better accuracy, lower computational load, and lower inference latency than SOTA methods.

cs.CV↗
arXiv2023

Recyclable vitrimer-based printed circuit board for circular electronics

Electronics are integral to modern life; however, at their end-of-life these devices produce environmentally hazardous electronic waste (e-waste). Recycling the ubiquitous printed circuit boards (PCBs) that make up a substantial mass and volume fraction of e-waste is challenging due to their use of irreversibly cured thermoset epoxies. We present a PCB formulation using transesterification vitrimers (vPCBs), and an end-to-end fabrication process compatible with standard manufacturing ecosystems. We create functional prototypes of IoT devices transmitting 2.4 GHz radio signals on vPCBs with electrical and mechanical properties meeting industry standards. Fractures and holes in vPCBs can be repaired while retaining comparable performance over more than four repair cycles. We further demonstrate non-destructive decomposition of transesterification vitrimer composites with solid inclusions and metal attachments by polymer swelling with small molecule solvents. We hypothesize that unlike traditional solvolysis recycling, swelling does not degrade the materials. Through dynamic mechanical analysis we find negligible catalyst loss, minimal changes in storage modulus, and equivalent polymer backbone composition across multiple recycling cycles. We achieve 98% polymer recovery, 100% fiber recovery, and 91% solvent recovery which we reuse to create new vPCBs without degraded performance. Our cradle-to-cradle life-cycle assessment shows substantial environmental impact reduction over conventional PCBs in 11 categories.

physics.app-ph↗
arXiv2023

Large Language Models are Few-Shot Health Learners

Large language models (LLMs) can capture rich representations of concepts that are useful for real-world tasks. However, language alone is limited. While existing LLMs excel at text-based inferences, health applications require that models be grounded in numerical data (e.g., vital signs, laboratory values in clinical domains; steps, movement in the wellness domain) that is not easily or readily expressed as text in existing training corpus. We demonstrate that with only few-shot tuning, a large language model is capable of grounding various physiological and behavioral time-series data and making meaningful inferences on numerous health tasks for both clinical and wellness contexts. Using data from wearable and medical sensor recordings, we evaluate these capabilities on the tasks of cardiac signal analysis, physical activity recognition, metabolic calculation (e.g., calories burned), and estimation of stress reports and mental health screeners.

cs.CL↗
arXiv2023

MMPD: Multi-Domain Mobile Video Physiology Dataset

Remote photoplethysmography (rPPG) is an attractive method for noninvasive, convenient and concomitant measurement of physiological vital signals. Public benchmark datasets have served a valuable role in the development of this technology and improvements in accuracy over recent years.However, there remain gaps in the public datasets.First, despite the ubiquity of cameras on mobile devices, there are few datasets recorded specifically with mobile phone cameras. Second, most datasets are relatively small and therefore are limited in diversity, both in appearance (e.g., skin tone), behaviors (e.g., motion) and environment (e.g., lighting conditions). In an effort to help the field advance, we present the Multi-domain Mobile Video Physiology Dataset (MMPD), comprising 11 hours of recordings from mobile phones of 33 subjects. The dataset is designed to capture videos with greater representation across skin tone, body motion, and lighting conditions. MMPD is comprehensive with eight descriptive labels and can be used in conjunction with the rPPG-toolbox. The reliability of the dataset is verified by mainstream unsupervised methods and neural methods. The GitHub repository of our dataset: https://github.com/THU-CS-PI/MMPD_rPPG_dataset.

cs.CV↗
arXiv2023

Modeling the Trade-off of Privacy Preservation and Activity Recognition on Low-Resolution Images

A computer vision system using low-resolution image sensors can provide intelligent services (e.g., activity recognition) but preserve unnecessary visual privacy information from the hardware level. However, preserving visual privacy and enabling accurate machine recognition have adversarial needs on image resolution. Modeling the trade-off of privacy preservation and machine recognition performance can guide future privacy-preserving computer vision systems using low-resolution image sensors. In this paper, using the at-home activity of daily livings (ADLs) as the scenario, we first obtained the most important visual privacy features through a user survey. Then we quantified and analyzed the effects of image resolution on human and machine recognition performance in activity recognition and privacy awareness tasks. We also investigated how modern image super-resolution techniques influence these effects. Based on the results, we proposed a method for modeling the trade-off of privacy preservation and activity recognition on low-resolution images.

cs.HC↗
arXiv2023

EarCough: Enabling Continuous Subject Cough Event Detection on Hearables

Cough monitoring can enable new individual pulmonary health applications. Subject cough event detection is the foundation for continuous cough monitoring. Recently, the rapid growth in smart hearables has opened new opportunities for such needs. This paper proposes EarCough, which enables continuous subject cough event detection on edge computing hearables by leveraging the always-on active noise cancellation (ANC) microphones. Specifically, we proposed a lightweight end-to-end neural network model -- EarCoughNet. To evaluate the effectiveness of our method, we constructed a synchronous motion and audio dataset through a user study. Results show that EarCough achieved an accuracy of 95.4% and an F1-score of 92.9% with a space requirement of only 385 kB. We envision EarCough as a low-cost add-on for future hearables to enable continuous subject cough event detection.

cs.SD↗