arXiv subjects

Sigrunn H. Sørbye

Publications and source records attributed to Sigrunn H. Sørbye.

8 recordsLinked to original sources

arXiv2026

Bayesian identification of early warning signals for long-range dependent climatic time series

Detecting early warning signals in climatic time series is essential for anticipating critical transitions and tipping points. Common statistical indicators include increased variance and lag-one autocorrelation prior to bifurcation points. However, these indicators are sensitive to observational noise, long-term mean trends, and long-memory dependence, all of which are prevalent in climatic time series. Such effects can easily obscure genuine signals or generate spurious detections. To address these challenges, we employ a flexible Bayesian framework for modelling time-varying autocorrelation in long-range dependent time series, also accounting for time-varying variance. The approach uses a mixture of two fractional Gaussian noise processes with a time-dependent weight function to represent fractional Gaussian noise with a time-varying Hurst exponent. Inference is performed via integrated nested Laplace approximation, enabling joint estimation of mean trends and handling of irregularly sampled observations. The strengths and limitations of detecting changes in the autocorrelation is investigated in extensive simulations. Applied to real climatic data sets, we find evidence of early warning signals in a reconstructed Atlantic multidecadal variability index, while dismissing such signals for paleoclimate records spanning the Dansgaard-Oeschger events.

stat.ME↗

arXiv2020

Model-based bias correction for short AR(1) and AR(2) processes

The class of autoregressive (AR) processes is extensively used to model temporal dependence in observed time series. Such models are easily available and routinely fitted using freely available statistical software like R. A potential caveat in analyzing short time series is that commonly applied estimators for the coefficients of AR processes are severely biased. This paper suggests a model-based approach for bias correction of well-known estimators for the coefficients of first and second-order stationary AR processes, taking the sampling distribution of the original estimator into account. This is achieved by modeling the relationship between the true and estimated AR coefficients using weighted orthogonal polynomial regression, fitted to a huge number of simulations. The finite-sample distributions of the new estimators are approximated using transformations of skew-normal densities and their properties are demonstrated by simulations and in the analysis of a real ecological data set. The new estimators are easily available in our accompanying R-package ARbiascorrect for time series of length n = 10, 11, ... , 50, where original estimates are found using exact or conditional maximum likelihood, Burg's method or the Yule-Walker equations.

stat.ME↗

arXiv2017

Careful prior specification avoids incautious inference for log-Gaussian Cox point processes

Prior specifications for hyperparameters of random fields in Bayesian spatial point process modelling can have a major impact on the statistical inference and the conclusions made. We consider fitting of log-Gaussian Cox processes to spatial point patterns relative to spatial covariate data. From an ecological point of view, an important aim of the analysis is to assess significant associations between the covariates and the point pattern intensity of a given species. This paper introduces the use of a reparameterised model to facilitate meaningful interpretations of the results and how these depend on hyperprior specifications. The model combines a scaled spatially structured field with an unstructured random field, having a common precision parameter. An additional hyperparameter identifies the fraction of variance explained by the spatially structured term and proper scaling makes the analysis invariant to grid resolution. The hyperparameters are assigned penalised complexity priors, which can be tuned intuitively by user-defined scaling parameters. We illustrate the approach analysing covariate effects on point patterns formed by two rainforest tree species in a study plot on Barro Colorado Island, Panama.

stat.ME↗

arXiv2017

An approximate fractional Gaussian noise model with ${\mathcal O}(n)$ computational cost

Fractional Gaussian noise (fGn) is a stationary time series model with long memory properties applied in various fields like econometrics, hydrology and climatology. The computational cost in fitting an fGn model of length $n$ using a likelihood-based approach is ${\mathcal O}(n^{2})$, exploiting the Toeplitz structure of the covariance matrix. In most realistic cases, we do not observe the fGn process directly but only through indirect Gaussian observations, so the Toeplitz structure is easily lost and the computational cost increases to ${\mathcal O}(n^{3})$. This paper presents an approximate fGn model of ${\mathcal O}(n)$ computational cost, both with direct or indirect Gaussian observations, with or without conditioning. This is achieved by approximating fGn with a weighted sum of independent first-order autoregressive processes, fitting the parameters of the approximation to match the autocorrelation function of the fGn model. The resulting approximation is stationary despite being Markov and gives a remarkably accurate fit using only four components. The performance of the approximate fGn model is demonstrated in simulations and two real data examples.

stat.ME↗

arXiv2016

Bayesian Computing with INLA: A Review

The key operation in Bayesian inference, is to compute high-dimensional integrals. An old approximate technique is the Laplace method or approximation, which dates back to Pierre- Simon Laplace (1774). This simple idea approximates the integrand with a second order Taylor expansion around the mode and computes the integral analytically. By developing a nested version of this classical idea, combined with modern numerical techniques for sparse matrices, we obtain the approach of Integrated Nested Laplace Approximations (INLA) to do approximate Bayesian inference for latent Gaussian models (LGMs). LGMs represent an important model-abstraction for Bayesian inference and include a large proportion of the statistical models used today. In this review, we will discuss the reasons for the success of the INLA-approach, the R-INLA package, why it is so accurate, why the approximations are very quick to compute and why LGMs make such a useful concept for Bayesian computing.

stat.ME↗

arXiv2016

An intuitive Bayesian spatial model for disease mapping that accounts for scaling

In recent years, disease mapping studies have become a routine application within geographical epidemiology and are typically analysed within a Bayesian hierarchical model formulation. A variety of model formulations for the latent level have been proposed but all come with inherent issues. In the classical BYM model, the spatially structured component cannot be seen independently from the unstructured component. This makes prior definitions for the hyperparameters of the two random effects challenging. There are alternative model formulations that address this confounding, however, the issue on how to choose interpretable hyperpriors is still unsolved. Here, we discuss a recently proposed parameterisation of the BYM model that leads to improved parameter control as the hyperparameters can be seen independently from each other. Furthermore, the need for a scaled spatial component is addressed, which facilitates assignment of interpretable hyperpriors and make these transferable between spatial applications with different graph structures. We provide implementation details for the new model formulation which preserve sparsity properties, and we investigate systematically the model performance and compare it to existing parameterisations. Through a simulation study, we show that the new model performs well, both showing good learning abilities and good shrinkage behaviour. In terms of model choice criteria, the proposed model performs at least equally well as existing parameterisations, but only the new formulation offers parameters that are interpretable and hyperpriors that have a clear meaning.

stat.ME↗

arXiv2015

Penalising model component complexity: A principled, practical approach to constructing priors

In this paper, we introduce a new concept for constructing prior distributions. We exploit the natural nested structure inherent to many model components, which defines the model component to be a flexible extension of a base model. Proper priors are defined to penalise the complexity induced by deviating from the simpler base model and are formulated after the input of a user-defined scaling parameter for that model component, both in the univariate and the multivariate case. These priors are invariant to reparameterisations, have a natural connection to Jeffreys' priors, are designed to support Occam's razor and seem to have excellent robustness properties, all which are highly desirable and allow us to use this approach to define default prior distributions. Through examples and theoretical results, we demonstrate the appropriateness of this approach and how it can be applied in various situations.

stat.ME↗

arXiv2013

A toolbox for fitting complex spatial point process models using integrated nested Laplace approximation (INLA)

This paper develops methodology that provides a toolbox for routinely fitting complex models to realistic spatial point pattern data. We consider models that are based on log-Gaussian Cox processes and include local interaction in these by considering constructed covariates. This enables us to use integrated nested Laplace approximation and to considerably speed up the inferential task. In addition, methods for model comparison and model assessment facilitate the modelling process. The performance of the approach is assessed in a simulation study. To demonstrate the versatility of the approach, models are fitted to two rather different examples, a large rainforest data set with covariates and a point pattern with multiple marks.

stat.AP↗