arXiv subjects

Sikun Yang

Publications and source records attributed to Sikun Yang.

22 records · Page 2Linked to original sources

arXiv2022

Estimating Latent Population Flows from Aggregated Data via Inversing Multi-Marginal Optimal Transport

We study the problem of estimating latent population flows from aggregated count data. This problem arises when individual trajectories are not available due to privacy issues or measurement fidelity. Instead, the aggregated observations are measured over discrete-time points, for estimating the population flows among states. Most related studies tackle the problems by learning the transition parameters of a time-homogeneous Markov process. Nonetheless, most real-world population flows can be influenced by various uncertainties such as traffic jam and weather conditions. Thus, in many cases, a time-homogeneous Markov model is a poor approximation of the much more complex population flows. To circumvent this difficulty, we resort to a multi-marginal optimal transport (MOT) formulation that can naturally represent aggregated observations with constrained marginals, and encode time-dependent transition matrices by the cost functions. In particular, we propose to estimate the transition flows from aggregated data by learning the cost functions of the MOT framework, which enables us to capture time-varying dynamic patterns. The experiments demonstrate the improved accuracy of the proposed algorithms than the related methods in estimating several real-world transition flows.

cs.LG↗

arXiv2020

The Hawkes Edge Partition Model for Continuous-time Event-based Temporal Networks

We propose a novel probabilistic framework to model continuous-time interaction events data. Our goal is to infer the \emph{implicit} community structure underlying the temporal interactions among entities, and also to exploit how the community structure influences the interaction dynamics among these nodes. To this end, we model the reciprocating interactions between individuals using mutually-exciting Hawkes processes. The base rate of the Hawkes process for each pair of individuals is built upon the latent representations inferred using the hierarchical gamma process edge partition model (HGaP-EPM). In particular, our model allows the interaction dynamics between each pair of individuals to be modulated by their respective affiliated communities. Moreover, our model can flexibly incorporate the auxiliary individuals' attributes, or covariates associated with interaction events. Efficient Gibbs sampling and Expectation-Maximization algorithms are developed to perform inference via Pólya-Gamma data augmentation strategy. Experimental results on real-world datasets demonstrate that our model not only achieves competitive performance for temporal link prediction compared with state-of-the-art methods, but also discovers interpretable latent structure behind the observed temporal interactions.

cs.SI↗

arXiv2018

Collapsed Variational Inference for Nonparametric Bayesian Group Factor Analysis

Group factor analysis (GFA) methods have been widely used to infer the common structure and the group-specific signals from multiple related datasets in various fields including systems biology and neuroimaging. To date, most available GFA models require Gibbs sampling or slice sampling to perform inference, which prevents the practical application of GFA to large-scale data. In this paper we present an efficient collapsed variational inference (CVI) algorithm for the nonparametric Bayesian group factor analysis (NGFA) model built upon an hierarchical beta Bernoulli process. Our CVI algorithm proceeds by marginalizing out the group-specific beta process parameters, and then approximating the true posterior in the collapsed space using mean field methods. Experimental results on both synthetic and real-world data demonstrate the effectiveness of our CVI algorithm for the NGFA compared with state-of-the-art GFA methods.

cs.LG↗

arXiv2018

A Poisson Gamma Probabilistic Model for Latent Node-group Memberships in Dynamic Networks

We present a probabilistic model for learning from dynamic relational data, wherein the observed interactions among networked nodes are modeled via the Bernoulli Poisson link function, and the underlying network structure are characterized by nonnegative latent node-group memberships, which are assumed to be gamma distributed. The latent memberships evolve according to Markov processes. The optimal number of latent groups can be determined by data itself. The computational complexity of our method scales with the number of non-zero links, which makes it scalable to large sparse dynamic relational data. We present batch and online Gibbs sampling algorithms to perform model inference. Finally, we demonstrate the model's performance on both synthetic and real-world datasets compared to state-of-the-art methods.

cs.SI↗