SearcharxivSearch

arXiv subjects

Silvia Bertoluzza

Publications and source records attributed to Silvia Bertoluzza.

At least 19 recordsLinked to original sources

The High Order Virtual Element Method On Approximate Domains: Neumann Boundary Conditions

In the framework of the virtual element method with shifted boundary type treatment of curved geometries, we propose a novel approach to the treatment of Neumann boundary conditions that does not require the approximate aligning of the physical and numerical normal directions and is therefore well suited to handle domain approximations obtained by agglomeration from underlying fine structured grids. For such an approach we give conditions under which we are able to prove optimal error estimates for arbitrary orders of the virtual element discretization.

math.NA

BioNetFlux: A Python Framework for Reaction--Diffusion--Chemotaxis Simulations on One-Dimensional Network Geometries

We present BioNetFlux, an open-source Python framework for the numerical simulation of coupled systems of partial differential equations (PDEs) on one-dimensional multi-arc networks by the Hybridized Discontinuous Galerkin method. Its design targets biological transport phenomena on graph-like geometries that arise naturally in microfluidic organ-on-chip (OoC) devices, vascular networks, and in-vitro cell-migration assays.

cs.MS

Avoiding stabilization terms in virtual elements for eigenvalue problems: The Reduced Basis Virtual Element Method

We present the novel Reduced Basis Virtual Element Method (rbVEM) for solving the Laplace eigenvalue problem. This approach is based on the lowest-order virtual element method and exploits the reduced basis technique to obtain an explicit representation of the virtual (non-polynomial) contribution to the discrete space. rbVEM yields a fully conforming discretization of the considered problem, so that stabilization terms are avoided. We prove that rbVEM provides the correct spectral approximation with optimal error estimates. Theoretical results are supplemented by an exhaustive numerical investigation.

math.NA

Towards uncertainty quantification of a model for cancer-on-chip experiments

This study is a first step towards using data-informed differential models to predict and control the dynamics of cancer-on-chip experiments. We consider a conceptualized one-dimensional device, containing a cancer and a population of white blood cells. The interaction between the cancer and the population of cells is modeled by a chemotaxis model inspired by Keller-Segel-type equations, which is solved by a Hybridized Discontinuous Galerkin method. Our goal is using (synthetic) data to tune the parameters of the governing equations and to assess the uncertainty on the predictions of the dynamics due to the residual uncertainty on the parameters remaining after the tuning procedure. To this end, we apply techniques from uncertainty quantification for parametric differential models. We first perform a global sensitivity analysis using both Sobol and Morris indices to assess how parameter uncertainty impacts model predictions, and fix the value of parameters with negligible impact. Subsequently, we conduct an inverse uncertainty quantification analysis by Bayesian techniques to compute a data-informed probability distribution of the remaining model parameters. Finally, we carry out a forward uncertainty quantification analysis to compute the impact of the updated (residual) parametric uncertainties on the quantities of interest of the model. The whole procedure is sped up by using surrogate models, based on sparse-grids, to approximate the mapping of the uncertain parameters to the quantities of interest.

cs.CE

The Reduced Basis Multigrid scheme for the Virtual Element Method

We present a non-nested W-cycle multigrid scheme for the lowest order Virtual Element Method on polygonal meshes. To avoid the implicit definition of the Virtual Element space, which poses several issues in the computation of intergrid operators that underpin multigrid methods, the proposed scheme uses a fully-conforming auxiliary space constructed by cheaply computing the virtual basis functions via the reduced basis method.

math.NA

The MINI mixed virtual element for the Stokes equation

We present and discuss a generalization of the popular MINI mixed finite element for the 2D Stokes equation by means of conforming virtual elements on polygonal meshes. We prove optimal error estimates for both velocity and pressure. Theoretical results are confirmed by several numerical tests performed with different choices of polynomial accuracy and meshes.

math.NA

The virtual element method on polygonal pixel-based tessellations

We analyze and validate the virtual element method combined with a boundary correction similar to the one in [1,2], to solve problems on two dimensional domains with curved boundaries approximated by polygonal domains. We focus on the case of approximating domains obtained as the union of squared elements out of a uniform structured mesh, such as the one that naturally arises when the domain is issued from an image. We show, both theoretically and numerically, that resorting to polygonal elements allows the assumptions required for stability to be satisfied for any polynomial order. This allows us to fully exploit the potential of higher order methods. Efficiency is ensured by a novel static condensation strategy acting on the edges of the decomposition.

math.NA

A stabilized three fields formulation for Discrete Fracture Networks

We propose a hybridized domain decomposition formulation of the discrete fracture network model, allowing for independent discretization of the individual fractures. A natural norm stabilization, obtained by penalizing the residual measured in the norm for the space where it naturally lives, is added to the local problem in the individual fracture so that no compatibility condition of inf-sup type is required between the Lagrange multiplier and the primal unknown, which can then be discretized independently of each other. Optimal stability and error estimates are proven, which are confirmed by numerical tests.

math.NA

Best approximation results and essential boundary conditions for novel types of weak adversarial network discretizations for PDEs

In this paper, we provide a theoretical analysis of the recently introduced weakly adversarial networks (WAN) method, used to approximate partial differential equations in high dimensions. We address the existence and stability of the solution, as well as approximation bounds. More precisely, we prove the existence of discrete solutions, intended in a suitable weak sense, for which we prove a quasi-best approximation estimate similar to Cea's lemma, a result commonly found in finite element methods. We also propose two new stabilized WAN-based formulas that avoid the need for direct normalization. Furthermore, we analyze the method's effectiveness for the Dirichlet boundary problem that employs the implicit representation of the geometry. The key requirement for achieving the best approximation outcome is to ensure that the space for the test network satisfies a specific condition, known as the inf-sup condition, essentially requiring that the test network set is sufficiently large when compared to the trial space. The method's accuracy, however, is only determined by the space of the trial network. We also devise a pseudo-time XNODE neural network class for static PDE problems, yielding significantly faster convergence results than the classical DNN network.

math.NA

An abstract framework for heterogeneous coupling: stability, approximation and preconditioning

We consider heterogeneous coupling problems on an abstract level, establishing fundamental principles of domain decomposition agnostic to the solvers of the local subproblems. Introducing a coupling framework reminiscent of FETI methods, but here on abstract form, we establish conditions for stability and minimal requirements for well-posedness on the continuous level, as well as conditions on local solvers for the approximation of subproblems. We then discuss stability of the resulting Lagrange multiplier methods and show stability under a mesh condition between the local discretizations and the mortar space. If this condition is not satisfied we show how a stabilization, acting only on the multiplier can be used to achieve stability. The design of preconditioners of the Schur complement system is discussed in the unstabilized case. Finally we discuss some applications that enter the framework.

math.NA

Localization of trace norms in two and three dimensions

We extend a localization result for the $H^{1/2}$ norm by B. Faermann to a wider class of subspaces of $H^{1/2}(Γ)$, and we prove an analogous result for the $H^{-1/2}(Γ)$ norm, $Γ$ being the boundary of a bounded polytopal domain $Ω$ in $\mathbb{R}^n$, $n=2,3$. As a corollary, we obtain equivalent, better localized, norms for both $H^{1/2}(Γ)$ and $H^{-1/2}(Γ)$, which can be exploited, for instance, in the design of preconditioners or of stabilized methods.

math.NA

Interior estimates for the Virtual Element Method

We analyze the local accuracy of the virtual element method. More precisely, we prove an error bound similar to the one holding for the finite element method, namely, that the local $H^1$ error in a interior subdomain is bounded by a term behaving like the best approximation allowed by the local smoothness of the solution in a larger interior subdomain plus the global error measured in a negative norm.

math.NA

Weakly imposed Dirichlet boundary conditions for 2D and 3D Virtual Elements

In the framework of virtual element discretizazions, we address the problem of imposing non homogeneous Dirichlet boundary conditions in a weak form, both on polygonal/polyhedral domains and on two/three dimensional domains with curved boundaries. We consider a Nitsche's type method [43,41], and the stabilized formulation of the Lagrange multiplier method proposed by Barbosa and Hughes in [9]. We prove that also for the virtual element method (VEM), provided the stabilization parameter is suitably chosen (large enough for Nitsche's method and small enough for the Barbosa-Hughes Lagrange multiplier method), the resulting discrete problem is well posed, and yields convergence with optimal order on polygonal/polyhedral domains. On smooth two/three dimensional domains, we combine both methods with a projection approach similar to the one of [31]. We prove that, given a polygonal/polyhedral approximation $Ω_h$ of the domain $Ω$, an optimal convergence rate can be achieved by using a suitable correction depending on high order derivatives of the discrete solution along outward directions (not necessarily orthogonal) at the boundary facets of $Ω_h$. Numerical experiments validate the theory.

math.NA

Artificial neural network evaluation of geometric constants for polygonal domains

We propose an approach based on Artificial Neural Networks (ANNs) to evaluate geometric constants relevant to the analysis and design of numerical schemes for partial differential equations. These constants play a central role, significantly influencing, for instance, a posteriori error estimates and the overall design of the computational strategy. Our technique leverages ANNs to learn the dependencies between these constants and a set of descriptive geometric features associated to polytopal mesh elements. The main computational costs are confined to data processing and training phases, which can be performed offline once and for all. This yields an effective tool for computing the constants, which we verify and show to be applicable across different scenarios, without substantial modifications - demonstrating its broader usability beyond the specific example considered.

math.NA

Algebraic representation of dual scalar products and stabilization of saddle point problems

We provide a systematic way to design computable bilinear forms which, on the class of subspaces $W^* \subseteq \mathcal{V}'$ that can be obtained by duality from a given finite dimensional subspace $W$ of an Hilbert space $\mathcal{V}$, are spectrally equivalent to the scalar product of $\mathcal{V}'$. Such a bilinear form can be used to build a stabilized discretization algorithm for the solution of an abstract saddle point problem allowing to decouple, in the choice of the discretization spaces, the requirements related to the approximation from the inf-sup compatibility condition, which, as we show, can not be completely avoided.

math.NA

A theoretical and numerical analysis of a Dirichlet-Neumann domain decomposition method for diffusion problems in heterogeneous media

Problems with localized nonhomogeneous material properties present well-known challenges for numerical simulations. In particular, such problems may feature large differences in length scales, causing difficulties with meshing and preconditioning. These difficulties are increased if the region of localized dynamics changes in time. Overlapping domain decomposition methods, which split the problem at the continuous level, show promise due to their ease of implementation and computational efficiency. Accordingly, the present work aims to further develop the mathematical theory of such methods at both the continuous and discrete levels. For the continuous formulation of the problem, we provide a full convergence analysis. For the discrete problem, we show how the described method may be interpreted as a Gauss-Seidel scheme or as a Neumann series approximation, establishing a convergence criterion in terms of the spectral radius of the system. We then provide a spectral scaling argument and provide numerical evidence for its justification.

math.NA

An a posteriori error estimate of the outer normal derivative using dual weights

We derive a residual based a-posteriori error estimate for the outer normal flux of approximations to {the diffusion problem with variable coefficient}. By analyzing the solution of the adjoint problem, we show that error indicators in the bulk may be defined to be of higher order than those close to the boundary, which lead to more economic meshes. The theory is illustrated with some numerical examples.

math.NA