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Simon T. Bate

Publications and source records attributed to Simon T. Bate.

2 recordsLinked to original sources

A framework for classifying and visualising experimental designs when subjects are measured repeatedly

When running experiments that involve humans or animals, for example in clinical or pre-clinical research, it is often the case that multiple measurements are taken on the experimental subjects. This may involve measuring subjects repeatedly over time to track any trends, administering a sequence of treatments to compare their effects within-subject, or taking multiple technical replicate samples of each subject to obtain a more reliable average response. However, it appears that there is some confusion as to what constitutes a 'repeated measure' and what does not. This paper clarifies this confusion by defining characteristics a design may possess when the subjects are assessed multiple times. These characteristics are delineated based on whether the subjects are the experimental units, if the experimental units are measured repeatedly or not, and which randomisation strategy is used. Experimental designs can then be classified using these characteristics and visualised using Hasse diagrams.

stat.AP

hassediagrams:an R package that generates the Hasse diagram of the layout structure and the restricted layout structure

With the advent of modern statistical software, complex experimental designs are now routinely employed in many areas of research. Failing to correctly identify the structure of the experimental design can lead to incorrect model selection and misleading inferences. This paper describes the hassediagrams package in R that determines the structure of the design, summarised by the layout structure, and generates a Hasse diagram of the layout structure. By considering the randomisation performed, in conjunction with the layout structure, a set of randomisation objects can be defined that form the restricted layout structure. This structure can also be visualised using a generalisation of the Hasse diagram. Objects in the restricted layout structure can be used to identify the terms to include in the statistical model. The use of the procedure thus ensures consistency of model selection due to the systematic approach taken to generate the model.

stat.CO