arXiv subjects

Siqi Li

Publications and source records attributed to Siqi Li.

At least 55 records · Page 3Linked to original sources

arXiv2026

A plug-and-play superconducting quantum controller at millikelvin temperatures enables exceeding 99.9% average gate fidelity

The development of large-scale superconducting quantum computing requires efficient in-situ control methods that allow high-fidelity operations at millikelvin temperatures. Superconducting circuits based on Josephson junctions offer a promising solution due to their high speed, low power dissipation, and cryogenic nature. Here, we report a superconducting quantum controller that enables direct chip-to-chip interconnection with qubits at 10 mK and high-fidelity, all-digital manipulation. Randomized benchmarking reveals a uniformly high average Clifford fidelity of 99.9% with leakage to high energy levels on the order of $10^{-4}$, and an estimated average gate operation energy of 0.121 fJ, demonstrating the potential to resolve the control bottleneck in superconducting quantum computing.

quant-ph↗

arXiv2026

KoALA: KL-L0 Adversarial Detector via Label Agreement

Deep neural networks are highly susceptible to adversarial attacks, which pose significant risks to security- and safety-critical applications. We present KoALA (KL-L0 Adversarial detection via Label Agreement), a novel, semantics-free adversarial detector that requires no architectural changes or adversarial retraining. KoALA operates on a simple principle: it detects an adversarial attack when class predictions from two complementary similarity metrics disagree. These metrics - KL divergence and an L0-based similarity - are specifically chosen to detect different types of perturbations. The KL divergence metric is sensitive to dense, low-amplitude shifts, while the L0-based similarity is designed for sparse, high-impact changes. We provide a formal proof of correctness for our approach. The only training required is a simple fine-tuning step on a pre-trained image encoder using clean images to ensure the embeddings align well with both metrics. This makes KoALA a lightweight, plug-and-play solution for existing models and various data modalities. Our extensive experiments on ResNet/CIFAR-10 and CLIP/Tiny-ImageNet confirm our theoretical claims. When the theorem's conditions are met, KoALA consistently and effectively detects adversarial examples. On the full test sets, KoALA achieves a precision of 0.96 and a recall of 0.97 on ResNet/CIFAR-10, and a precision of 0.71 and a recall of 0.94 on CLIP/Tiny-ImageNet.

cs.LG↗

arXiv2025

UR-Bench: A Benchmark for Multi-Hop Reasoning over Ultra-High-Resolution Images

Recent multimodal large language models (MLLMs) show strong capabilities in visual-language reasoning, yet their performance on ultra-high-resolution imagery remains largely unexplored. Existing visual question answering (VQA) benchmarks typically rely on medium-resolution data, offering limited visual complexity. To bridge this gap, we introduce Ultra-high-resolution Reasoning Benchmark (UR-Bench), a benchmark designed to evaluate the reasoning capabilities of MLLMs under extreme visual information. UR-Bench comprises two major categories, Humanistic Scenes and Natural Scenes, covering four subsets of ultra-high-resolution images with distinct spatial structures and data sources. Each subset contains images ranging from hundreds of megapixels to gigapixels, accompanied by questions organized into three levels, enabling evaluation of models' reasoning capabilities in ultra-high-resolution scenarios. We further propose an agent-based framework in which a language model performs reasoning by invoking external visual tools. In addition, we introduce Semantic Abstraction and Retrieval tools that enable more efficient processing of ultra-high-resolution images. We evaluate state-of-the-art models using both an end-to-end MLLMs and our agent-based framework, demonstrating the effectiveness of our framework.

cs.CV↗

arXiv2025

Incorporating Tissue Composition Information in Total-Body PET Metabolic Quantification of Bone Marrow through Dual-Energy CT

Bone marrow (BM) metabolic quantification with 18F-fluorodeoxyglucose (FDG) positron emission tomography (PET) is of broad clinical significance for accurate assessment of BM at staging and follow-up, especially when immunotherapy is involved. However, current methods of quantifying BM may be inaccurate because the volume defined to measure bone marrow may also consist of a fraction of trabecular bone in which 18F-FDG activity is negligible, resulting in a potential underestimation of true BM uptake. In this study, we demonstrate this bone-led tissue composition effect and propose a bone fraction correction (BFC) method using X-ray dual-energy computed tomography (DECT) material decomposition. This study included ten scans from five cancer patients who underwent baseline and follow-up dynamic 18F-FDG PET and DECT scans using the uEXPLORER total-body PET/CT system. The voxel-wise bone volume fraction was estimated from DECT and then incorporated into the PET measurement formulas for BFC. The standardized uptake value (SUV), 18F-FDG delivery rate K1, and net influx rate Ki values in BM regions were estimated with and without BFC and compared using the statistical analysis. The results first demonstrated the feasibility of performing voxel-wise material decomposition using DECT for metabolic BM imaging. With BFC, the SUV, K1, and Ki values significantly increased by an average of 13.28% in BM regions compared to those without BFC (all P<0.0001), indicating the impact of BFC for BM quantification. Parametric imaging with BFC further confirmed regional analysis. Our study using DECT suggests current SUV and kinetic quantification of BM are likely underestimated in PET due to the presence of a significant bone volume fraction. Incorporating tissue composition information through BFC may improve BM metabolic quantification.

physics.med-ph↗

arXiv2025

CoTDeceptor:Adversarial Code Obfuscation Against CoT-Enhanced LLM Code Agents

LLM-based code agents(e.g., ChatGPT Codex) are increasingly deployed as detector for code review and security auditing tasks. Although CoT-enhanced LLM vulnerability detectors are believed to provide improved robustness against obfuscated malicious code, we find that their reasoning chains and semantic abstraction processes exhibit exploitable systematic weaknesses.This allows attackers to covertly embed malicious logic, bypass code review, and propagate backdoored components throughout real-world software supply chains.To investigate this issue, we present CoTDeceptor, the first adversarial code obfuscation framework targeting CoT-enhanced LLM detectors. CoTDeceptor autonomously constructs evolving, hard-to-reverse multi-stage obfuscation strategy chains that effectively disrupt CoT-driven detection logic.We obtained malicious code provided by security enterprise, experimental results demonstrate that CoTDeceptor achieves stable and transferable evasion performance against state-of-the-art LLMs and vulnerability detection agents. CoTDeceptor bypasses 14 out of 15 vulnerability categories, compared to only 2 bypassed by prior methods. Our findings highlight potential risks in real-world software supply chains and underscore the need for more robust and interpretable LLM-powered security analysis systems.

cs.CR↗

arXiv2025

Patlak Parametric Image Estimation from Dynamic PET Using Diffusion Model Prior

Dynamic PET enables the quantitative estimation of physiology-related parameters and is widely utilized in research and increasingly adopted in clinical settings. Parametric imaging in dynamic PET requires kinetic modeling to estimate voxel-wise physiological parameters based on specific kinetic models. However, parametric images estimated through kinetic model fitting often suffer from low image quality due to the inherently ill-posed nature of the fitting process and the limited counts resulting from non-continuous data acquisition across multiple bed positions in whole-body PET. In this work, we proposed a diffusion model-based kinetic modeling framework for parametric image estimation, using the Patlak model as an example. The score function of the diffusion model was pre-trained on static total-body PET images and served as a prior for both Patlak slope and intercept images by leveraging their patch-wise similarity. During inference, the kinetic model was incorporated as a data-consistency constraint to guide the parametric image estimation. The proposed framework was evaluated on total-body dynamic PET datasets with different dose levels, demonstrating the feasibility and promising performance of the proposed framework in improving parametric image quality.

eess.IV↗

arXiv2025

TRACER: Transfer Learning based Real-time Adaptation for Clinical Evolving Risk

Clinical decision support tools built on electronic health records often experience performance drift due to temporal population shifts, particularly when changes in the clinical environment initially affect only a subset of patients, resulting in a transition to mixed populations. Such case-mix changes commonly arise following system-level operational updates or the emergence of new diseases, such as COVID-19. We propose TRACER (Transfer Learning-based Real-time Adaptation for Clinical Evolving Risk), a framework that identifies encounter-level transition membership and adapts predictive models using transfer learning without full retraining. In simulation studies, TRACER outperformed static models trained on historical or contemporary data. In a real-world application predicting hospital admission following emergency department visits across the COVID-19 transition, TRACER improved both discrimination and calibration. TRACER provides a scalable approach for maintaining robust predictive performance under evolving and heterogeneous clinical conditions.

cs.LG↗

arXiv2025

FastForward Pruning: Efficient LLM Pruning via Single-Step Reinforcement Learning

Pruning is an effective method for compressing Large Language Models, but finding an optimal, non-uniform layer-wise sparsity allocation remains a key challenge. While heuristic methods are fast but yield suboptimal performance, more powerful search-based approaches like Reinforcement Learning are often hindered by prohibitive computational costs on large-scale models. To overcome this efficiency barrier, we propose FastForward Pruning. Its core is a decoupled, single-step RL framework that separates policy optimization from the complex budget satisfaction problem. Such a decoupling is crucial for efficiently searching the vast policy space of LLMs. This curriculum-based strategy begins with low-cost, simple tasks and gradually increases in complexity, significantly reducing the search's computational overhead. Evaluated on the LLaMA, Mistral, and OPT model families, our framework discovers pruning policies that achieve superior performance over strong heuristic baselines. Crucially, when compared to other search-based algorithms, our method achieves competitive or superior results at a fraction of the computational cost, demonstrating a clear advantage in search efficiency.

cs.LG↗

arXiv2025

FineSkiing: A Fine-grained Benchmark for Skiing Action Quality Assessment

Action Quality Assessment (AQA) aims to evaluate and score sports actions, which has attracted widespread interest in recent years. Existing AQA methods primarily predict scores based on features extracted from the entire video, resulting in limited interpretability and reliability. Meanwhile, existing AQA datasets also lack fine-grained annotations for action scores, especially for deduction items and sub-score annotations. In this paper, we construct the first AQA dataset containing fine-grained sub-score and deduction annotations for aerial skiing, which will be released as a new benchmark. For the technical challenges, we propose a novel AQA method, named JudgeMind, which significantly enhances performance and reliability by simulating the judgment and scoring mindset of professional referees. Our method segments the input action video into different stages and scores each stage to enhance accuracy. Then, we propose a stage-aware feature enhancement and fusion module to boost the perception of stage-specific key regions and enhance the robustness to visual changes caused by frequent camera viewpoints switching. In addition, we propose a knowledge-based grade-aware decoder to incorporate possible deduction items as prior knowledge to predict more accurate and reliable scores. Experimental results demonstrate that our method achieves state-of-the-art performance.

cs.CV↗

arXiv2025

Fluorescence intensity correlations enable 3D imaging without sample rotations

Lensless X-ray imaging provides element-specific nanoscale insights into thick samples beyond the reach of conventional light and electron microscopy. Coherent diffraction imaging (CDI) methods, such as ptychographic tomography, can recover three-dimensional (3D) nanoscale structures but require extensive sample rotation, adding complexity to experiments. X-ray elastic-scattering patterns from a single sample orientation are highly directional and provide limited 3D information about the structure. In contrast to X-ray elastic scattering, X-ray fluorescence is emitted mostly isotropically. However, first-order spatial coherence has traditionally limited nanoscale fluorescence imaging to single-crystalline samples. Here, we demonstrate that intensity correlations of X-ray fluorescence excited by ultrashort X-ray pulses contain 3D structural information of non-periodic, stationary objects. In our experiment, we illuminated a vanadium foil within a sub-200 nm X-ray laser beam focus. Without changing the sample orientation, we recorded 16 distinct specimen projections using detector regions covering different photon incidence angles relative to the X-ray free-electron laser (FEL) beam. The projections varied systematically as the fluorescing volume was translated along an astigmatism, confirming that FEL-induced fluorescence reflects real-space structural changes. Our results establish a new approach for lensless 3D imaging of non-periodic specimens using fluorescence intensity correlations, with broad implications for materials science, chemistry, and nanotechnology.

physics.optics↗

arXiv2025

RE-Searcher: Robust Agentic Search with Goal-oriented Planning and Self-reflection

Large language models (LLMs) excel at knowledge-intensive question answering and reasoning, yet their real-world deployment remains constrained by knowledge cutoff, hallucination, and limited interaction modalities. Augmenting LLMs with external search tools helps alleviate these issues, but it also exposes agents to a complex search environment in which small, plausible variations in query formulation can steer reasoning into unproductive trajectories and amplify errors. We present a systematic analysis that quantifies how environmental complexity induces fragile search behaviors and, in turn, degrades overall performance. To address this challenge, we propose a simple yet effective approach to instantiate a search agent, RE-Searcher. During search, RE-Searcher explicitly articulates a concrete search goal and subsequently reflects on whether the retrieved evidence satisfies that goal. This combination of goal-oriented planning and self-reflection enables RE-Searcher to resist spurious cues in complex search environments and perform robust search. Extensive experiments show that our method improves search accuracy and achieves state-of-the-art results. Perturbation studies further demonstrate substantial resilience to noisy or misleading external signals, mitigating the fragility of the search process. We believe these findings offer practical guidance for integrating LLM-powered agents into more complex interactive environments and enabling more autonomous decision-making.

cs.CL↗

arXiv2025

SIM-Shapley: A Stable and Computationally Efficient Approach to Shapley Value Approximation

Explainable artificial intelligence (XAI) is essential for trustworthy machine learning (ML), particularly in high-stakes domains such as healthcare and finance. Shapley value (SV) methods provide a principled framework for feature attribution in complex models but incur high computational costs, limiting their scalability in high-dimensional settings. We propose Stochastic Iterative Momentum for Shapley Value Approximation (SIM-Shapley), a stable and efficient SV approximation method inspired by stochastic optimization. We analyze variance theoretically, prove linear $Q$-convergence, and demonstrate improved empirical stability and low bias in practice on real-world datasets. In our numerical experiments, SIM-Shapley reduces computation time by up to 85% relative to state-of-the-art baselines while maintaining comparable feature attribution quality. Beyond feature attribution, our stochastic mini-batch iterative framework extends naturally to a broader class of sample average approximation problems, offering a new avenue for improving computational efficiency with stability guarantees. Code is publicly available at https://github.com/nliulab/SIM-Shapley.

stat.ML↗

arXiv2025

YOLOv13: Real-Time Object Detection with Hypergraph-Enhanced Adaptive Visual Perception

The YOLO series models reign supreme in real-time object detection due to their superior accuracy and computational efficiency. However, both the convolutional architectures of YOLO11 and earlier versions and the area-based self-attention mechanism introduced in YOLOv12 are limited to local information aggregation and pairwise correlation modeling, lacking the capability to capture global multi-to-multi high-order correlations, which limits detection performance in complex scenarios. In this paper, we propose YOLOv13, an accurate and lightweight object detector. To address the above-mentioned challenges, we propose a Hypergraph-based Adaptive Correlation Enhancement (HyperACE) mechanism that adaptively exploits latent high-order correlations and overcomes the limitation of previous methods that are restricted to pairwise correlation modeling based on hypergraph computation, achieving efficient global cross-location and cross-scale feature fusion and enhancement. Subsequently, we propose a Full-Pipeline Aggregation-and-Distribution (FullPAD) paradigm based on HyperACE, which effectively achieves fine-grained information flow and representation synergy within the entire network by distributing correlation-enhanced features to the full pipeline. Finally, we propose to leverage depthwise separable convolutions to replace vanilla large-kernel convolutions, and design a series of blocks that significantly reduce parameters and computational complexity without sacrificing performance. We conduct extensive experiments on the widely used MS COCO benchmark, and the experimental results demonstrate that our method achieves state-of-the-art performance with fewer parameters and FLOPs. Specifically, our YOLOv13-N improves mAP by 3.0\% over YOLO11-N and by 1.5\% over YOLOv12-N. The code and models of our YOLOv13 model are available at: https://github.com/iMoonLab/yolov13.

cs.CV↗

arXiv2025

White-Box Reasoning: Synergizing LLM Strategy and gm/Id Data for Automated Analog Circuit Design

Analog IC design is a bottleneck due to its reliance on experience and inefficient simulations, as traditional formulas fail in advanced nodes. Applying Large Language Models (LLMs) directly to this problem risks mere "guessing" without engineering principles. We present a "synergistic reasoning" framework that integrates an LLM's strategic reasoning with the physical precision of the gm/Id methodology. By empowering the LLM with gm/Id lookup tables, it becomes a quantitative, data-driven design partner. We validated this on a two-stage op-amp, where our framework enabled the Gemini model to meet all TT corner specs in 5 iterations and extended optimization to all PVT corners. A crucial ablation study proved gm/Id data is key for this efficiency and precision; without it, the LLM is slower and deviates. Compared to a senior engineer's design, our framework achieves quasi-expert quality with an order-of-magnitude improvement in efficiency. This work validates a path for true analog design automation by combining LLM reasoning with scientific circuit design methodologies.

cs.AR↗

arXiv2025

CodeBoost: Boosting Code LLMs by Squeezing Knowledge from Code Snippets with RL

Code large language models (LLMs) have become indispensable tools for building efficient and automated coding pipelines. Existing models are typically post-trained using reinforcement learning (RL) from general-purpose LLMs using "human instruction-final answer" pairs, where the instructions are usually from manual annotations. However, collecting high-quality coding instructions is both labor-intensive and difficult to scale. On the other hand, code snippets are abundantly available from various sources. This imbalance presents a major bottleneck in instruction-based post-training. We propose CodeBoost, a post-training framework that enhances code LLMs purely from code snippets, without relying on human-annotated instructions. CodeBoost introduces the following key components: (1) maximum-clique curation, which selects a representative and diverse training corpus from code; (2) bi-directional prediction, which enables the model to learn from both forward and backward prediction objectives; (3) error-aware prediction, which incorporates learning signals from both correct and incorrect outputs; (4) heterogeneous augmentation, which diversifies the training distribution to enrich code semantics; and (5) heterogeneous rewarding, which guides model learning through multiple reward types including format correctness and execution feedback from both successes and failures. Extensive experiments across several code LLMs and benchmarks verify that CodeBoost consistently improves performance, demonstrating its effectiveness as a scalable and effective training pipeline.

cs.CL↗

arXiv2025

The variance-gamma product distribution

We derive the exact probability density function of the product of $N$ independent variance-gamma random variables with zero location parameter. We then apply this formula to derive formulas for the cumulative distribution function and characteristic function, as well as asymptotic approximations for the density, tail probabilities and quantile function. From our general results, we deduce closed-form formulas for the density, cumulative distribution function and characteristic function of the product of $N$ independent asymmetric Laplace random variables and mixed products of independent Laplace and centred normal random variables.

math.PR↗

arXiv2025

UAVScenes: A Multi-Modal Dataset for UAVs

Multi-modal perception is essential for unmanned aerial vehicle (UAV) operations, as it enables a comprehensive understanding of the UAVs' surrounding environment. However, most existing multi-modal UAV datasets are primarily biased toward localization and 3D reconstruction tasks, or only support map-level semantic segmentation due to the lack of frame-wise annotations for both camera images and LiDAR point clouds. This limitation prevents them from being used for high-level scene understanding tasks. To address this gap and advance multi-modal UAV perception, we introduce UAVScenes, a large-scale dataset designed to benchmark various tasks across both 2D and 3D modalities. Our benchmark dataset is built upon the well-calibrated multi-modal UAV dataset MARS-LVIG, originally developed only for simultaneous localization and mapping (SLAM). We enhance this dataset by providing manually labeled semantic annotations for both frame-wise images and LiDAR point clouds, along with accurate 6-degree-of-freedom (6-DoF) poses. These additions enable a wide range of UAV perception tasks, including segmentation, depth estimation, 6-DoF localization, place recognition, and novel view synthesis (NVS). Our dataset is available at https://github.com/sijieaaa/UAVScenes

cs.CV↗

arXiv2025

Benchmarking Foundation Models with Multimodal Public Electronic Health Records

Foundation models have emerged as a powerful approach for processing electronic health records (EHRs), offering flexibility to handle diverse medical data modalities. In this study, we present a comprehensive benchmark that evaluates the performance, fairness, and interpretability of foundation models, both as unimodal encoders and as multimodal learners, using the publicly available MIMIC-IV database. To support consistent and reproducible evaluation, we developed a standardized data processing pipeline that harmonizes heterogeneous clinical records into an analysis-ready format. We systematically compared eight foundation models, encompassing both unimodal and multimodal models, as well as domain-specific and general-purpose variants. Our findings demonstrate that incorporating multiple data modalities leads to consistent improvements in predictive performance without introducing additional bias. Through this benchmark, we aim to support the development of effective and trustworthy multimodal artificial intelligence (AI) systems for real-world clinical applications. Our code is available at https://github.com/nliulab/MIMIC-Multimodal.

cs.LG↗