arXiv subjects

Siyuan Li

Publications and source records attributed to Siyuan Li.

At least 55 records · Page 3Linked to original sources

arXiv2026

RankE: End-to-End Post-Training for Discrete Text-to-Image Generation with Decoder Co-Evolution

Discrete autoregressive (AR) text-to-image (T2I) models pair a VQ tokenizer with an AR policy, and current post-training pipelines optimize only the policy while keeping the VQ decoder frozen. Recent diffusion T2I work, exemplified by REPA-E, has shown that the VAE itself constitutes a key alignment bottleneck, yet no analogous investigation exists for discrete AR models. We show that policy-only optimization induces Latent Covariate Shift: as the policy evolves, the resulting token distribution diverges from the ground-truth distribution on which the decoder was trained, such that reward scores improve while decoded image quality degrades. To address this mismatch, we propose RankE, the first end-to-end post-training framework for discrete T2I generation. Rather than optimizing the policy against a fixed decoder, RankE co-evolves both components through alternating optimization: each module maximizes a ranking-based alignment objective while being regularized by a stability-preserving anchor suited to its parameter space. This co-evolution breaks the fidelity--alignment trade-off that plagues frozen-decoder approaches: on LlamaGen-XL (775M), standard RL improves CLIP but degrades FID, whereas RankE improves both simultaneously (FID 15.21, CLIP 33.76 on MS-COCO 30K). Consistent gains on Janus-Pro (1B) confirm that decoder co-evolution reliably converts reward optimization into pixel-space quality improvements.

cs.CV↗

arXiv2026

Modality-Decoupled Online Recursive Editing

Online model editing for multimodal large language models (MLLMs) requires assimilating a stream of corrections under tight compute and memory budgets. Yet editors developed for text-only LLMs often degrade on MLLMs: visually dominant activations skew the statistics that shape updates, causing cross-modal conflict, while sequential writes become entangled in a shared edit space and amplify long-horizon interference, causing inter-edit interference. To address these, we propose M-ORE, a modality-decoupled online recursive editor for lifelong MLLM adaptation. M-ORE is derived from a unified proximal-projection formulation and admits a closed-form update with a Sherman-Morrison recursion, yielding constant per-edit overhead. It maintains module-wise locality statistics for the text stack and the visual projector to avoid visually dominated update shaping and performs continual updates in a fixed orthogonal low-rank edit subspace via a Sherman-Morrison recursion to mitigate long-horizon interference. Experiments on multiple MLLM backbones and online editing benchmarks show that our M-ORE method consistently improves reliability, generality, and locality over strong baselines, while achieving favorable quality-efficiency scaling. Our code is publicly available at https://github.com/lab-klc/M-ORE.

cs.LG↗

arXiv2026

Key-Gram: Extensible World Knowledge for Embodied Manipulation

Embodied control increasingly requires models to follow compositional language instructions while reasoning over dynamic visual states. However, current vision-language-action policies and world-action models often couple linguistic knowledge with visual computation in a shared backbone or conditioning pathway, leading to modality competition and making knowledge extension dependent on backbone updates. In this paper, we introduce Key-Gram, a conditional-memory framework that separates language-derived world knowledge from visual-state reasoning for embodied control. At its core is a memory module that decomposes an instruction into task-specific key-grams, retrieves static linguistic priors through deterministic hashed lookup, and injects the retrieved entries into selected hidden layers through context-aware gating and lightweight convolutional fusion. This design allows the backbone to devote its main capacity to visual reasoning and action inference, while reusable instruction knowledge is stored in an extensible external memory. The logical memory table can be conveniently partitioned during training and, due to its $O(1)$ lookup pattern, efficiently placed on host memory during inference. Across RoboTwin2.0, LIBERO/LIBERO-Plus, and real-world dual-arm manipulation, Key-Gram consistently improves both $π_{0}$ and $π_{0.5}$ backbones, with average relative gains of $29.5\%/9.9\%$ on RoboTwin2.0, $35.8\%/4.5\%$ on LIBERO-Plus transfer without target-domain fine-tuning, and $15.4\%/8.1\%$ on real-world long-horizon tasks. These results demonstrate that externalized linguistic memory provides an effective and extensible mechanism for improving compositional grounding, transfer, and real-world manipulation.

cs.RO↗

arXiv2026

NanoResearch: Co-Evolving Skills, Memory, and Policy for Personalized Research Automation

LLM-powered multi-agent systems can now automate the full research pipeline from ideation to paper writing, but a fundamental question remains: automation for whom? Researchers operate under different resource configurations, hold different methodological preferences, and target different output formats. A system that produces uniform outputs regardless of these differences will systematically under-serve every individual user, making personalization a precondition for research automation to be genuinely usable. However, achieving it requires three capabilities that current systems lack: accumulating reusable procedural knowledge across projects, retaining user-specific experience across sessions, and internalizing implicit preferences that resist explicit formalization. We propose NanoResearch, a multi-agent framework that addresses these gaps through tri-level co-evolution. A skill bank distills recurring operations into compact procedural rules reusable across projects. A memory module maintains user- and project-specific experience that grounds planning decisions in each user's research history. A label-free policy learning converts free-form feedback into persistent parameter updates of the planner, reshaping subsequent coordination. These three layers co-evolve: reliable skills produce richer memory, richer memory informs better planning, and preference internalization continuously realigns the loop to each user. Extensive experiments demonstrate that NanoResearch delivers substantial gains over state-of-the-art AI research systems, and progressively refines itself to produce better research at lower cost over successive cycles.

cs.AI↗

arXiv2026

PAGER: Bridging the Semantic-Execution Gap in Point-Precise Geometric GUI Control

Large vision-language models have significantly advanced GUI agents, enabling executable interaction across web, mobile, and desktop interfaces. Yet these gains largely rely on a forgiving region-tolerant paradigm, where many nearby pixels inside the same component remain valid. Precise geometric construction breaks this assumption: actions must land on points in continuous canvas space rather than tolerant regions. Because geometric primitives carry ontological dependencies, a local coordinate error can induce cascading topological failures that distort downstream objects and invalidate the final construction. We identify this regime as precision-sensitive GUI tasks, requiring point-level accuracy, geometry-aware verification, and robustness to dependency-driven error propagation. To benchmark it, we introduce PAGE Bench, with 4,906 problems and over 224K process-supervised, pixel-level GUI actions. We further propose PAGER, a topology-aware agent that decomposes construction into dependency-structured planning and pixel-level execution. Pixel-grounded supervised tuning establishes executable action grammar, while precision-aligned reinforcement learning mitigates rollout-induced exposure bias through state-conditioned geometric feedback. Experiments reveal a pronounced Semantic-Execution Gap: general multimodal models can exceed 88% action type accuracy yet remain below 6% task success. PAGER closes this gap, delivering 4.1x higher task success than the strongest evaluated general baseline and raising step success rate from below 9% for GUI-specialized agents to over 62%, establishing a new state of the art for point-precise GUI control.

cs.AI↗

arXiv2026

Benchmarking Safety Risks of Knowledge-Intensive Reasoning under Malicious Knowledge Editing

Large language models (LLMs) increasingly rely on knowledge editing to support knowledge-intensive reasoning, but this flexibility also introduces critical safety risks: adversaries can inject malicious or misleading knowledge that corrupts downstream reasoning and leads to harmful outcomes. Existing knowledge editing benchmarks primarily focus on editing efficacy and lack a unified framework for systematically evaluating the safety implications of edited knowledge on reasoning behavior. To address this gap, we present EditRisk-Bench, a benchmark for systematically evaluating safety risks of knowledge-intensive reasoning under malicious knowledge editing. Unlike prior benchmarks that mainly emphasize edit success, generalization, and locality, EditRisk-Bench focuses on how injected knowledge affects downstream reasoning behavior and reliability. It integrates diverse malicious scenarios, including misinformation, bias, and safety violations, together with multi-level knowledge-intensive reasoning tasks and representative editing strategies within a unified evaluation framework measuring attack effectiveness, reasoning correctness, and side effects. Extensive experiments on both open-source and closed-source LLMs show that malicious knowledge editing can reliably induce incorrect or unsafe reasoning while largely preserving general capabilities, making such risks difficult to detect. We further identify several key factors influencing these risks, including edit scale, knowledge characteristics, and reasoning complexity. EditRisk-Bench provides an extensible testbed for understanding and mitigating safety risks in knowledge editing for LLMs.

cs.AI↗

arXiv2026

PaperFit: Vision-in-the-Loop Typesetting Optimization for Scientific Documents

A LaTeX manuscript that compiles without error is not necessarily publication-ready. The resulting PDFs frequently suffer from misplaced floats, overflowing equations, inconsistent table scaling, widow and orphan lines, and poor page balance, forcing authors into repetitive compile-inspect-edit cycles. Rule-based tools are blind to rendered visuals, operating only on source code and log files. Text-only LLMs perform open-loop text editing, unable to predict or verify the two-dimensional layout consequences of their changes. Reliable typesetting optimization therefore requires a visual closed loop with verification after every edit. We formalize this problem as Visual Typesetting Optimization (VTO), the task of transforming a compilable LaTeX paper into a visually polished, page-budget-compliant PDF through iterative visual verification and source-level revision, and introduce a five-category taxonomy of typesetting defects to guide diagnosis. We present PaperFit, a vision-in-the-loop agent that iteratively renders pages, diagnoses defects, and applies constrained repairs. To benchmark VTO, we construct PaperFit-Bench with 200 papers across 10 venue templates and 13 defect types at different difficulty. Extensive experiments show that PaperFit outperforms all baselines by a large margin, establishing that bridging the gap from compilable source to publication-ready PDF requires vision-in-the-loop optimization and that VTO constitutes a critical missing stage in the document automation pipeline.

cs.AI↗

arXiv2026

Lightweight Stylistic Consistency Profiling: Robust Detection of LLM-Generated Textual Content for Multimedia Moderation

The increasing prevalence of Large Language Models (LLMs) in content creation has made distinguishing human-written textual content from LLM-generated counterparts a critical task for multimedia moderation. Existing detectors often rely on statistical cues or model-specific heuristics, making them vulnerable to paraphrasing and adversarial manipulations, and consequently limiting their robustness and interpretability. In this work, we proposeLiSCP , a novel lightweight stylistic consistency profiling method for robust detection of LLM-generated textual content, focusing on feature stability under adversarial manipulation. Our approach constructs a consistency profile that combines discrete stylistic features with continuous semantic signals, leveraging stylistic stability across multimodal-guided paraphrased text variants. Experiments spanning real-world multimedia news and movie datasets and conventional text domains demonstrate that LiSCP achieves superior performance on in-domain detection and outperforms existing approaches by up to 11.79% in cross-domain settings. Additionally,it demonstrates notable robustness under adversarial scenarios, including adversarial attacks and hybrid human-AI settings.

cs.CL↗

arXiv2026

Intern-Atlas: A Methodological Evolution Graph as Research Infrastructure for AI Scientists

Existing research infrastructure is fundamentally document-centric, providing citation links between papers but lacking explicit representations of methodological evolution. In particular, it does not capture the structured relationships that explain how and why research methods emerge, adapt, and build upon one another. With the rise of AI-driven research agents as a new class of consumers of scientific knowledge, this limitation becomes increasingly consequential, as such agents cannot reliably reconstruct method evolution topologies from unstructured text. We introduce Intern-Atlas, a methodological evolution graph that automatically identifies method-level entities, infers lineage relationships among methodologies, and captures the bottlenecks that drive transitions between successive innovations. Built from 1,030,314 papers spanning AI conferences, journals, and arXiv preprints, the resulting graph comprises 9,410,201 semantically typed edges, each grounded in verbatim source evidence, forming a queryable causal network of methodological development. To operationalize this structure, we further propose a self-guided temporal tree search algorithm for constructing evolution chains that trace the progression of methods over time. We evaluate the quality of the resulting graph against expert-curated ground-truth evolution chains and observe strong alignment. In addition, we demonstrate that Intern-Atlas enables downstream applications in idea evaluation and automated idea generation. We position methodological evolution graphs as a foundational data layer for the emerging automated scientific discovery.

cs.AI↗

arXiv2026

Thinking with Drafting: Optical Decompression via Logical Reconstruction

Existing multimodal large language models have achieved high-fidelity visual perception and exploratory visual generation. However, a precision paradox persists in complex reasoning tasks: optical perception systems transcribe symbols without capturing logical topology, while pixel-based generative models produce visual artifacts lacking mathematical exactness. To bridge this gap, we propose that reasoning over visual inputs be reconceptualized as optical decompression-the process of reconstructing latent logical structures from compressed visual tokens. Guided by the axiom that Parsing is Reasoning, we introduce Thinking with Drafting (TwD), which utilizes a minimalist Domain-Specific Language (DSL) as a grounding intermediate representation. Unlike standard approaches that hallucinate answers directly, TwD forces the model to draft its mental model into executable code, rendering deterministic visual proofs for self-verification. To validate this, we present VisAlg, a visual algebra benchmark. Experiments demonstrate that TwD serve as a superior cognitive scaffold. Our work establishes a closed-loop system where visual generation acts not as a creative output but as a logical verifier, offering a generalizable path for visual reasoning.

cs.CL↗

arXiv2026

DSIPA: Detecting LLM-Generated Texts via Sentiment-Invariant Patterns Divergence Analysis

The rapid advancement of large language models (LLMs) presents new security challenges, particularly in detecting machine-generated text used for misinformation, impersonation, and content forgery. Most existing detection approaches struggle with robustness against adversarial perturbation, paraphrasing attacks, and domain shifts, often requiring restrictive access to model parameters or large labeled datasets. To address this, we propose DSIPA, a novel training-free framework that detects LLM-generated content by quantifying sentiment distributional stability under controlled stylistic variation. It is based on the observation that LLMs typically exhibit more emotionally consistent outputs, while human-written texts display greater affective variation. Our framework operates in a zero-shot, black-box manner, leveraging two unsupervised metrics, sentiment distribution consistency and sentiment distribution preservation, to capture these intrinsic behavioral asymmetries without the need for parameter updates or probability access. Extensive experiments are conducted on state-of-the-art proprietary and open-source models, including GPT-5.2, Gemini-1.5-pro, Claude-3, and LLaMa-3.3. Evaluations on five domains, such as news articles, programming code, student essays, academic papers, and community comments, demonstrate that DSIPA improves F1 detection scores by up to 49.89% over baseline methods. The framework exhibits superior generalizability across domains and strong resilience to adversarial conditions, providing a robust and interpretable behavioral signal for secure content identification in the evolving LLM landscape.

cs.CL↗

arXiv2026

How RL Unlocks the Aha Moment in Geometric Interleaved Reasoning

Solving complex geometric problems inherently requires interleaved reasoning: a tight alternation between constructing diagrams and performing logical deductions. Although recent Multimodal Large Language Models (MLLMs) have demonstrated strong capabilities in visual generation and plotting, we identify a counter-intuitive and underexplored phenomenon. Naively applying Supervised Fine-Tuning (SFT) on interleaved plot-solution data leads to a substantial degradation in reasoning performance compared to text-only baselines. We argue that this failure stems from a fundamental limitation of SFT, which primarily induces distributional alignment: the model learns to reproduce the surface format of interleaved plotting but fails to internalize the causal dependency between the generated plot and reasoning steps. To overcome this limitation, we propose Faire (Functional alignment for interleaved reasoning), a reinforcement learning framework that enforces three casual constraints to move beyond superficial imitation toward functional alignment. Extensive experiments show that Faire induces a qualitative shift in model behavior in which the plotting is effectively internalized, yielding competitive performance on challenging geometric reasoning benchmarks.

cs.CL↗

arXiv2026

Programming with Data: Test-Driven Data Engineering for Self-Improving LLMs from Raw Corpora

Reliably transferring specialized human knowledge from text into large language models remains a fundamental challenge in artificial intelligence. Fine-tuning on domain corpora has enabled substantial capability gains, but the process operates without feedback: when a model fails on a domain task, there is no method to diagnose what is deficient in the training data, and the only recourse is to add more data indiscriminately. Here we show that when a structured knowledge representation extracted from the source corpus serves as the shared foundation for both training data and evaluation, the complete data-engineering lifecycle maps onto the software development lifecycle in a precise and operative way: training data becomes source code specifying what the model should learn, model training becomes compilation, benchmarking becomes unit testing, and failure-driven data repair becomes debugging. Under this correspondence, model failures decompose into concept-level gaps and reasoning-chain breaks that can be traced back to specific deficiencies in the data and repaired through targeted patches, with each repair cycle producing consistent improvements across model scales and architectures without degrading general capabilities. We formalize this principle as Programming with Data and instantiate it across sixteen disciplines spanning the natural sciences, engineering, biomedicine, and the social sciences, releasing a structured knowledge base, benchmark suite, and training corpus as open resources. By demonstrating that the relationship between training data and model behaviour is structurally traceable and systematically repairable, this work establishes a principled foundation for the reliable engineering of human expertise into language models.

cs.SE↗

arXiv2026

Doloris: Dual Conditional Diffusion Implicit Bridges with Sparsity Masking Strategy for Unpaired Single-Cell Perturbation Estimation

Estimating single-cell responses across various perturbations facilitates the identification of key genes and enhances drug screening, significantly boosting experimental efficiency. However, single-cell sequencing is a destructive process, making it impossible to capture the same cell's phenotype before and after perturbation. Consequently, data collected under perturbed and unperturbed conditions are inherently unpaired, creating a critical yet unresolved problem in single-cell perturbation modeling. Moreover, the high dimensionality and sparsity of single-cell expression make direct modeling prone to focusing on zeros and neglecting meaningful patterns. To address these problems, we propose a new paradigm for single-cell perturbation modeling. Specifically, we leverage dual diffusion models to learn the control and perturbed distributions separately, and implicitly align them through a shared Gaussian latent space, without requiring explicit cell pairing. Furthermore, we introduce a sparsity masking strategy in which the mask model learns to predict zero-expressed genes, allowing the diffusion model to focus on capturing meaningful patterns among expressed genes and thereby preserving diversity in high-dimensional sparse data. We introduce \textbf{Doloris}, a generative framework that defines a new paradigm for modeling unpaired, high-dimensional, and sparse single-cell perturbation data. It leverages dual conditional diffusion models for separate learning of control and perturbed distributions, complemented by a sparsity masking strategy to enhance prediction of zero-valued genes. The results on publicly available datasets show that our model effectively captures the diversity of single-cell perturbations and achieves state-of-the-art performance. To facilitate reproducibility, we include the code in the supplementary materials.

cs.LG↗

arXiv2026

Vibe Medicine: Redefining Biomedical Research Through Human-AI Co-Work

With the emergence of large language models (LLMs) and AI agent frameworks, the human-AI co-work paradigm known as Vibe Coding is changing how people code, making it more accessible and productive. In scientific research, where workflows are more complex and the burden of specialized labor limits independent researchers and those in low-resource areas, the potential impact is even greater, particularly in biomedicine, which involves heterogeneous data modalities and multi-step analytical pipelines. In this paper, we introduce Vibe Medicine, a co-work paradigm in which clinicians and researchers direct skill-augmented AI agents through natural language to execute complex, multi-step biomedical workflows, while retaining the role of research director who specifies objectives, reviews intermediate results, and makes domain-informed decisions. The enabling infrastructure consists of three layers: capable LLMs, agent frameworks such as OpenClaw and Hermes Agent, and the OpenClaw medical skills collection, which includes more than 1,000 curated skills from multiple open-source repositories. We analyze the architecture and skill categories of this collection across ten biomedical domains, and present case studies covering rare disease diagnosis, drug repurposing, and clinical trial design that demonstrate end-to-end workflows in practice. We also identify the principal risks, such as hallucination, data privacy, and over-reliance, and outline directions toward more reliable, trustworthy, and clinically integrated agent-assisted research that advances research and technological equity and reduces health care resource disparities.

cs.AI↗

arXiv2026

Evolving Beyond Snapshots: Harmonizing Structure and Sequence via Entity State Tuning for Temporal Knowledge Graph Forecasting

Temporal knowledge graph (TKG) forecasting requires predicting future facts by jointly modeling structural dependencies within each snapshot and temporal evolution across snapshots. However, most existing methods are stateless: they recompute entity representations at each timestamp from a limited query window, leading to episodic amnesia and rapid decay of long-term dependencies. To address this limitation, we propose Entity State Tuning (EST), an encoder-agnostic framework that endows TKG forecasters with persistent and continuously evolving entity states. EST maintains a global state buffer and progressively aligns structural evidence with sequential signals via a closed-loop design. Specifically, a topology-aware state perceiver first injects entity-state priors into structural encoding. Then, a unified temporal context module aggregates the state-enhanced events with a pluggable sequence backbone. Subsequently, a dual-track evolution mechanism writes the updated context back to the global entity state memory, balancing plasticity against stability. Experiments on multiple benchmarks show that EST consistently improves diverse backbones and achieves state-of-the-art performance, highlighting the importance of state persistence for long-horizon TKG forecasting.

cs.AI↗

arXiv2026

CoopGuard: Stateful Cooperative Agents Safeguarding LLMs Against Evolving Multi-Round Attacks

As Large Language Models (LLMs) are increasingly deployed in complex applications, their vulnerability to adversarial attacks raises urgent safety concerns, especially those evolving over multi-round interactions. Existing defenses are largely reactive and struggle to adapt as adversaries refine strategies across rounds. In this work, we propose CoopGuard , a stateful multi-round LLM defense framework based on cooperative agents that maintains and updates an internal defense state to counter evolving attacks. It employs three specialized agents (Deferring Agent, Tempting Agent, and Forensic Agent) for complementary round-level strategies, coordinated by System Agent, which conditions decisions on the evolving defense state (interaction history) and orchestrates agents over time. To evaluate evolving threats, we introduce the EMRA benchmark with 5,200 adversarial samples across 8 attack types, simulating progressively LLM multi-round attacks. Experiments show that CoopGuard reduces attack success rate by 78.9% over state-of-the-art defenses, while improving deceptive rate by 186% and reducing attack efficiency by 167.9%, offering a more comprehensive assessment of multi-round defense. These results demonstrate that CoopGuard provides robust protection for LLMs in multi-round adversarial scenarios.

cs.CR↗

arXiv2026

SAM 3: Segment Anything with Concepts

We present Segment Anything Model (SAM) 3, a unified model that detects, segments, and tracks objects in images and videos based on concept prompts, which we define as either short noun phrases (e.g., "yellow school bus"), image exemplars, or a combination of both. Promptable Concept Segmentation (PCS) takes such prompts and returns segmentation masks and unique identities for all matching object instances. To advance PCS, we build a scalable data engine that produces a high-quality dataset with 4M unique concept labels, including hard negatives, across images and videos. Our model consists of an image-level detector and a memory-based video tracker that share a single backbone. Recognition and localization are decoupled with a presence head, which boosts detection accuracy. SAM 3 doubles the accuracy of existing systems in both image and video PCS, and improves previous SAM capabilities on visual segmentation tasks. We open source SAM 3 along with our new Segment Anything with Concepts (SA-Co) benchmark for promptable concept segmentation.

cs.CV↗