arXiv subjects

Soheil Fatehiboroujeni

Publications and source records attributed to Soheil Fatehiboroujeni.

3 recordsLinked to original sources

arXiv2020

Flapping, swirling and flipping: Non-linear dynamics of pre-stressed active filaments

Initially straight slender elastic rods with geometrically constrained ends buckle and form stable two-dimensional shapes when compressed by bringing the ends together. It is also known that beyond a critical value of the pre-stress, clamped rods transition to bent, twisted three-dimensional equilibrium shapes. Recently, we showed that pre-stressed planar shapes when immersed in a dissipative fluid and animated by nonconservative follower forces exhibit stable large-amplitude flapping oscillations. Here, we use time-stepper methods to analyze the three-dimensional instabilities and dynamics of pre-stressed planar and non-planar filament configurations when subject to active follower forces and dissipative fluid drag. First, we find that type of boundary constraint determines the nature of the non-linear patterns following instability. When the filament is clamped at one end and pinned at the other with follower forces directed towards the clamped end, we observe only stable planar (flapping) oscillations termed flapping result. When both ends are clamped however, we observe a secondary instability wherein planar oscillations are destabilized by off-planar perturbations and result in fully three-dimensional swirling patterns characterized by two distinct time-scales. The first time scale characterizes continuous and unidirectional swirling rotation around the end-to-end axis. The second time scale captures the rate at which the direction of swirling reverses or flips. The overall time over which the direction of swirling flips is very short compared to the long times over which the filament swirls in the same direction. Computations indicate that the reversal of swirling oscillations resembles relaxation oscillations with each cycle initiated by a sudden jump in torsional deformation and then followed by a period of gradual decrease in net torsion until the next cycle of variations.

nlin.PS↗

arXiv2019

Effect of Boundary Constraints on the Nonlinear Flapping of Filaments Animated by Follower Forces

Elastically driven filaments subjected to animating compressive follower forces provide a synthetic way to mimic the oscillatory beating of active biological filaments such as eukaryotic cilia. The dynamics of such active filaments can, under favorable conditions, exhibit stable time-periodic responses that result due to the interplay of elastic buckling instabilities, geometric constraints, boundary conditions, and dissipation due to fluid drag. In this paper, we use a continuum elastic rod model to estimate the critical follower force required for the onset of the stable time-periodic flapping oscillations in pre-stressed rods subjected to fluid drag. The pre-stress is generated by imposing either clamped-clamped or clamped-pinned boundary constraints and the results are compared with those of clamped-free case, which is without pre-stress. We find that the critical value increases with the initial slack--that quantifies the pre-stress, and strongly depends on the type of the constraints at the boundaries. The frequency of oscillations far from the onset, however, depends primarily on the magnitude of the follower force, not on the boundary constraints. Interestingly, oscillations for the clamped-pinned case are observed only when the follower forces are directed towards the clamped end. This finding can be exploited to design a mechanical switch to initiate or quench the oscillations by reversing the direction of the follower force or altering the boundary conditions.

physics.bio-ph↗

arXiv2018

Follower Forces in Pre-Stressed Fixed-Fixed Rods to Mimic Oscillatory Beating of Active Filaments

Flagella and cilia are examples of actively oscillating, whiplike biological filaments that are crucial to processes as diverse as locomotion, mucus clearance, embryogenesis and cell motility. Elastic driven rod-like filaments subjected to compressive follower forces provide a way to mimic oscillatory beating in synthetic settings. In the continuum limit, this spatiotemporal response is an emergent phenomenon resulting from the interplay between the structural elastic instability of the slender rods subjected to the non-conservative follower forces, geometric constraints that control the onset of this instability, and viscous dissipation due to fluid drag by ambient media. In this paper, we use an elastic rod model to characterize beating frequencies, the critical follower forces and the non-linear rod shapes, for prestressed, clamped rods subject to two types of fluid drag forces, namely, linear Stokes drag and non-linear Morrison drag. We find that the critical follower force depends strongly on the initial slack and weakly on the nature of the drag force. The emergent frequencies however, depend strongly on both the extent of pre-stress as well as the nature of the fluid drag.

physics.comp-ph↗