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Soheil Kolouri

Publications and source records attributed to Soheil Kolouri.

At least 37 records · Page 2Linked to original sources

Vector-Quantized Soft Label Compression for Dataset Distillation

Dataset distillation is an emerging technique for reducing the computational and storage costs of training machine learning models by synthesizing a small, informative subset of data that captures the essential characteristics of a much larger dataset. Recent methods pair synthetic samples and their augmentations with soft labels from a teacher model, enabling student models to generalize effectively despite the small size of the distilled dataset. While soft labels are critical for effective distillation, the storage and communication overhead they incur, especially when accounting for augmentations, is often overlooked. In practice, each distilled sample is associated with multiple soft labels, making them the dominant contributor to storage costs, particularly in large-class settings such as ImageNet-1K. In this paper, we present a rigorous analysis of bit requirements across dataset distillation frameworks, quantifying the storage demands of both distilled samples and their soft labels. To address the overhead, we introduce a vector-quantized autoencoder (VQAE) for compressing soft labels, achieving substantial compression while preserving the effectiveness of the distilled data. We validate our method on both vision and language distillation benchmarks. On ImageNet-1K, our proposed VQAE achieves 30--40x additional compression over RDED, LPLD, SRE2L, and CDA baselines while retaining over $90\%$ of their original performance.

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Neural-Augmented Kelvinlet for Real-Time Soft Tissue Deformation Modeling

Accurate and efficient modeling of soft-tissue interactions is fundamental for advancing surgical simulation, surgical robotics, and model-based surgical automation. To achieve real-time latency, classical Finite Element Method (FEM) solvers are often replaced with neural approximations; however, naively training such models in a fully data-driven manner without incorporating physical priors frequently leads to poor generalization and physically implausible predictions. We present a novel physics-informed neural simulation framework that enables real-time prediction of soft-tissue deformations under complex single- and multi-grasper interactions. Our approach integrates Kelvinlet-based analytical priors with large-scale FEM data, capturing both linear and nonlinear tissue responses. This hybrid design improves predictive accuracy and physical plausibility across diverse neural architectures while maintaining the low-latency performance required for interactive applications. We validate our method on challenging surgical manipulation tasks involving standard laparoscopic grasping tools, demonstrating substantial improvements in deformation fidelity and temporal stability over existing baselines. These results establish Kelvinlet-augmented learning as a principled and computationally efficient paradigm for real-time, physics-aware soft-tissue simulation in surgical AI.

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LOTFormer: Doubly-Stochastic Linear Attention via Low-Rank Optimal Transport

Transformers have proven highly effective across modalities, but standard softmax attention scales quadratically with sequence length, limiting long context modeling. Linear attention mitigates this by approximating attention with kernel feature maps, yet most attention mechanisms remain row normalized and can over concentrate mass on a few tokens, harming robustness and information flow. Doubly stochastic attention counteracts this by balancing token participation across both rows and columns, but existing approaches often add significant overhead. We propose LOTFormer, a linear time doubly stochastic attention mechanism derived from an optimal transport view of attention as a coupling between query and key measures. LOTFormer enforces a low rank transport plan by conditioning on a learnable pivot measure with small support. We solve two entropic transport problems, queries to pivot and pivot to keys, and compose them into a conditional coupling that is provably doubly stochastic, has rank at most $r \ll n$, and applies to values in $O(nr)$ time without forming the full $n \times n$ matrix. The pivot locations and masses are learned end-to-end. Across vision and text benchmarks, LOTFormer delivers strong accuracy efficiency tradeoffs when plugged into standard backbones including Swin, DeiT, and BERT.

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Knowledge Distillation and Dataset Distillation of Large Language Models: Emerging Trends, Challenges, and Future Directions

The exponential growth of Large Language Models (LLMs) continues to highlight the need for efficient strategies to meet ever-expanding computational and data demands. This survey provides a comprehensive analysis of two complementary paradigms: Knowledge Distillation (KD) and Dataset Distillation (DD), both aimed at compressing LLMs while preserving their advanced reasoning capabilities and linguistic diversity. We first examine key methodologies in KD, such as task-specific alignment, rationale-based training, and multi-teacher frameworks, alongside DD techniques that synthesize compact, high-impact datasets through optimization-based gradient matching, latent space regularization, and generative synthesis. Building on these foundations, we explore how integrating KD and DD can produce more effective and scalable compression strategies. Together, these approaches address persistent challenges in model scalability, architectural heterogeneity, and the preservation of emergent LLM abilities. We further highlight applications across domains such as healthcare and education, where distillation enables efficient deployment without sacrificing performance. Despite substantial progress, open challenges remain in preserving emergent reasoning and linguistic diversity, enabling efficient adaptation to continually evolving teacher models and datasets, and establishing comprehensive evaluation protocols. By synthesizing methodological innovations, theoretical foundations, and practical insights, our survey charts a path toward sustainable, resource-efficient LLMs through the tighter integration of KD and DD principles.

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LUNA: Linear Universal Neural Attention with Generalization Guarantees

Scaling attention faces a critical bottleneck: the $\mathcal{O}(n^2)$ quadratic computational cost of softmax attention, which limits its application in long-sequence domains. While linear attention mechanisms reduce this cost to $\mathcal{O}(n)$, they typically rely on fixed random feature maps, such as random Fourier features or hand-crafted functions. This reliance on static, data-agnostic kernels creates a fundamental trade-off, forcing practitioners to sacrifice significant model accuracy for computational efficiency. We introduce \textsc{LUNA}, a kernelized linear attention mechanism that eliminates this trade-off, retaining linear cost while matching and surpassing the accuracy of quadratic attention. \textsc{LUNA} is built on the key insight that the kernel feature map itself should be learned rather than fixed a priori. By parameterizing the kernel, \textsc{LUNA} learns a feature basis tailored to the specific data and task, overcoming the expressive limitations of fixed-feature methods. \textsc{Luna} implements this with a learnable feature map that induces a positive-definite kernel and admits a streaming form, yielding linear time and memory scaling in the sequence length. Empirical evaluations validate our approach across diverse settings. On the Long Range Arena (LRA), \textsc{Luna} achieves state-of-the-art average accuracy among efficient Transformers under compute parity, using the same parameter count, training steps, and approximate FLOPs. \textsc{Luna} also excels at post-hoc conversion: replacing softmax in fine-tuned BERT and ViT-B/16 checkpoints and briefly fine-tuning recovers most of the original performance, substantially outperforming fixed linearizations.

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Low-Rank Prehab: Preparing Neural Networks for SVD Compression

Low-rank approximation methods such as singular value decomposition (SVD) and its variants (e.g., Fisher-weighted SVD, Activation SVD) have recently emerged as effective tools for neural network compression. In this setting, decomposition acts as a "surgical" intervention, followed by fine-tuning that serves as "rehab" to recover accuracy. Inspired by prehabilitation in surgery, we introduce a pre-compression fine-tuning stage, Low-Rank Prehab, that explicitly encourages low-rank structure in weight matrices while preserving task performance. By conditioning the model before SVD, Prehab steers weights toward spectrally compact regions of the parameter space, enabling smoother low-rank approximation and improved recovery. Experiments on large language models (LLMs) and other Transformer-based architectures, including Vision Transformers (ViTs), show that Prehab substantially reduces the immediate accuracy drop after compression and consistently improves post-finetuning performance. Across a wide range of compression ratios, our method outperforms state-of-the-art SVD-based techniques such as SVD-LLM, highlighting the importance of preparing models for compression rather than only improving the compression and recovery stages. Source code is available at https://github.com/niqretnuh/PREHAB-SVD

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Policy Search, Retrieval, and Composition via Task Similarity in Collaborative Agentic Systems

Agentic AI aims to create systems that set their own goals, adapt proactively to change, and refine behavior through continuous experience. Recent advances suggest that, when facing multiple and unforeseen tasks, agents could benefit from sharing machine-learned knowledge and reusing policies that have already been fully or partially learned by other agents. However, how to query, select, and retrieve policies from a pool of agents, and how to integrate such policies remains a largely unexplored area. This study explores how an agent decides what knowledge to select, from whom, and when and how to integrate it in its own policy in order to accelerate its own learning. The proposed algorithm, \emph{Modular Sharing and Composition in Collective Learning} (MOSAIC), improves learning in agentic collectives by combining (1) knowledge selection using performance signals and cosine similarity on Wasserstein task embeddings, (2) modular and transferable neural representations via masks, and (3) policy integration, composition and fine-tuning. MOSAIC outperforms isolated learners and global sharing approaches in both learning speed and overall performance, and in some cases solves tasks that isolated agents cannot. The results also demonstrate that selective, goal-driven reuse leads to less susceptibility to task interference. We also observe the emergence of self-organization, where agents solving simpler tasks accelerate the learning of harder ones through shared knowledge.

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Fused Partial Gromov-Wasserstein for Structured Objects

Structured data, such as graphs, is vital in machine learning due to its capacity to capture complex relationships and interactions. In recent years, the Fused Gromov-Wasserstein (FGW) distance has attracted growing interest because it enables the comparison of structured data by jointly accounting for feature similarity and geometric structure. However, as a variant of optimal transport (OT), classical FGW assumes an equal mass constraint on the compared data. In this work, we relax this mass constraint and propose the Fused Partial Gromov-Wasserstein (FPGW) framework, which extends FGW to accommodate unbalanced data. Theoretically, we establish the relationship between FPGW and FGW and prove the metric properties of FPGW. Numerically, we introduce Frank-Wolfe solvers and Sinkhorn solvers for the proposed FPGW framework. Finally, we evaluate the FPGW distance through graph matching, graph classification and graph clustering experiments, demonstrating its robust performance.

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EMPEROR: Efficient Moment-Preserving Representation of Distributions

We introduce EMPEROR (Efficient Moment-Preserving Representation of Distributions), a mathematically rigorous and computationally efficient framework for representing high-dimensional probability measures arising in neural network representations. Unlike heuristic global pooling operations, EMPEROR encodes a feature distribution through its statistical moments. Our approach leverages the theory of sliced moments: features are projected onto multiple directions, lightweight univariate Gaussian mixture models (GMMs) are fit to each projection, and the resulting slice parameters are aggregated into a compact descriptor. We establish determinacy guarantees via Carleman's condition and the Cramér-Wold theorem, ensuring that the GMM is uniquely determined by its sliced moments, and we derive finite-sample error bounds that scale optimally with the number of slices and samples. Empirically, EMPEROR captures richer distributional information than common pooling schemes across various data modalities, while remaining computationally efficient and broadly applicable.

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NeuroBOLT: Resting-state EEG-to-fMRI Synthesis with Multi-dimensional Feature Mapping

Functional magnetic resonance imaging (fMRI) is an indispensable tool in modern neuroscience, providing a non-invasive window into whole-brain dynamics at millimeter-scale spatial resolution. However, fMRI is constrained by issues such as high operation costs and immobility. With the rapid advancements in cross-modality synthesis and brain decoding, the use of deep neural networks has emerged as a promising solution for inferring whole-brain, high-resolution fMRI features directly from electroencephalography (EEG), a more widely accessible and portable neuroimaging modality. Nonetheless, the complex projection from neural activity to fMRI hemodynamic responses and the spatial ambiguity of EEG pose substantial challenges both in modeling and interpretability. Relatively few studies to date have developed approaches for EEG-fMRI translation, and although they have made significant strides, the inference of fMRI signals in a given study has been limited to a small set of brain areas and to a single condition (i.e., either resting-state or a specific task). The capability to predict fMRI signals in other brain areas, as well as to generalize across conditions, remain critical gaps in the field. To tackle these challenges, we introduce a novel and generalizable framework: NeuroBOLT, i.e., Neuro-to-BOLD Transformer, which leverages multi-dimensional representation learning from temporal, spatial, and spectral domains to translate raw EEG data to the corresponding fMRI activity signals across the brain. Our experiments demonstrate that NeuroBOLT effectively reconstructs unseen resting-state fMRI signals from primary sensory, high-level cognitive areas, and deep subcortical brain regions, achieving state-of-the-art accuracy with the potential to generalize across varying conditions and sites, which significantly advances the integration of these two modalities.

eess.IV↗

ESPFormer: Doubly-Stochastic Attention with Expected Sliced Transport Plans

While self-attention has been instrumental in the success of Transformers, it can lead to over-concentration on a few tokens during training, resulting in suboptimal information flow. Enforcing doubly-stochastic constraints in attention matrices has been shown to improve structure and balance in attention distributions. However, existing methods rely on iterative Sinkhorn normalization, which is computationally costly. In this paper, we introduce a novel, fully parallelizable doubly-stochastic attention mechanism based on sliced optimal transport, leveraging Expected Sliced Transport Plans (ESP). Unlike prior approaches, our method enforces doubly stochasticity without iterative Sinkhorn normalization, significantly enhancing efficiency. To ensure differentiability, we incorporate a temperature-based soft sorting technique, enabling seamless integration into deep learning models. Experiments across multiple benchmark datasets, including image classification, point cloud classification, sentiment analysis, and neural machine translation, demonstrate that our enhanced attention regularization consistently improves performance across diverse applications. Our implementation code can be found at https://github.com/dariansal/ESPFormer.

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Constrained Sliced Wasserstein Embedding

Sliced Wasserstein (SW) distances offer an efficient method for comparing high-dimensional probability measures by projecting them onto multiple 1-dimensional probability distributions. However, identifying informative slicing directions has proven challenging, often necessitating a large number of slices to achieve desirable performance and thereby increasing computational complexity. We introduce a constrained learning approach to optimize the slicing directions for SW distances. Specifically, we constrain the 1D transport plans to approximate the optimal plan in the original space, ensuring meaningful slicing directions. By leveraging continuous relaxations of these transport plans, we enable a gradient-based primal-dual approach to train the slicer parameters, alongside the remaining model parameters. We demonstrate how this constrained slicing approach can be applied to pool high-dimensional embeddings into fixed-length permutation-invariant representations. Numerical results on foundation models trained on images, point clouds, and protein sequences showcase the efficacy of the proposed constrained learning approach in learning more informative slicing directions. Our implementation code can be found at https://github.com/Stranja572/constrainedswe.

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MCNC: Manifold-Constrained Reparameterization for Neural Compression

The outstanding performance of large foundational models across diverse tasks, from computer vision to speech and natural language processing, has significantly increased their demand. However, storing and transmitting these models poses significant challenges due to their massive size (e.g., 750GB for Llama 3.1 405B). Recent literature has focused on compressing the original weights or reducing the number of parameters required for fine-tuning these models. These compression methods generally constrain the parameter space, for example, through low-rank reparametrization (e.g., LoRA), pruning, or quantization (e.g., QLoRA) during or after the model training. In this paper, we present a novel model compression method, which we term Manifold-Constrained Neural Compression (MCNC). This method constrains the parameter space to low-dimensional pre-defined and frozen nonlinear manifolds, which effectively cover this space. Given the prevalence of good solutions in over-parameterized deep neural networks, we show that by constraining the parameter space to our proposed manifold, we can identify high-quality solutions while achieving unprecedented compression rates across a wide variety of tasks and architectures. Through extensive experiments in computer vision and natural language processing tasks, we demonstrate that our method significantly outperforms state-of-the-art baselines in terms of compression, accuracy, and/or model reconstruction time. Our code is publicly available at https://github.com/mint-vu/MCNC.

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Partial Gromov-Wasserstein Metric

The Gromov-Wasserstein (GW) distance has gained increasing interest in the machine learning community in recent years, as it allows for the comparison of measures in different metric spaces. To overcome the limitations imposed by the equal mass requirements of the classical GW problem, researchers have begun exploring its application in unbalanced settings. However, Unbalanced GW (UGW) can only be regarded as a discrepancy rather than a rigorous metric/distance between two metric measure spaces (mm-spaces). In this paper, we propose a particular case of the UGW problem, termed Partial Gromov-Wasserstein (PGW). We establish that PGW is a well-defined metric between mm-spaces and discuss its theoretical properties, including the existence of a minimizer for the PGW problem and the relationship between PGW and GW, among others. We then propose two variants of the Frank-Wolfe algorithm for solving the PGW problem and show that they are mathematically and computationally equivalent. Moreover, based on our PGW metric, we introduce the analogous concept of barycenters for mm-spaces. Finally, we validate the effectiveness of our PGW metric and related solvers in applications such as shape matching, shape retrieval, and shape interpolation, comparing them against existing baselines. Our code is available at https://github.com/mint-vu/PGW_Metric.

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Linear Partial Gromov-Wasserstein Embedding

The Gromov-Wasserstein (GW) problem, a variant of the classical optimal transport (OT) problem, has attracted growing interest in the machine learning and data science communities due to its ability to quantify similarity between measures in different metric spaces. However, like the classical OT problem, GW imposes an equal mass constraint between measures, which restricts its application in many machine learning tasks. To address this limitation, the partial Gromov-Wasserstein (PGW) problem has been introduced. It relaxes the equal mass constraint, allowing the comparison of general positive Radon measures. Despite this, both GW and PGW face significant computational challenges due to their non-convex nature. To overcome these challenges, we propose the linear partial Gromov-Wasserstein (LPGW) embedding, a linearized embedding technique for the PGW problem. For $K$ different metric measure spaces, the pairwise computation of the PGW distance requires solving the PGW problem ${O}(K^2)$ times. In contrast, the proposed linearization technique reduces this to ${O}(K)$ times. Similar to the linearization technique for the classical OT problem, we prove that LPGW defines a valid metric for metric measure spaces. Finally, we demonstrate the effectiveness of LPGW in practical applications such as shape retrieval and learning with transport-based embeddings, showing that LPGW preserves the advantages of PGW in partial matching while significantly enhancing computational efficiency. The code is available at https://github.com/mint-vu/Linearized_Partial_Gromov_Wasserstein.

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Diffusion-Augmented Coreset Expansion for Scalable Dataset Distillation

With the rapid scaling of neural networks, data storage and communication demands have intensified. Dataset distillation has emerged as a promising solution, condensing information from extensive datasets into a compact set of synthetic samples by solving a bilevel optimization problem. However, current methods face challenges in computational efficiency, particularly with high-resolution data and complex architectures. Recently, knowledge-distillation-based dataset condensation approaches have made this process more computationally feasible. Yet, with the recent developments of generative foundation models, there is now an opportunity to achieve even greater compression, enhance the quality of distilled data, and introduce valuable diversity into the data representation. In this work, we propose a two-stage solution. First, we compress the dataset by selecting only the most informative patches to form a coreset. Next, we leverage a generative foundation model to dynamically expand this compressed set in real-time, enhancing the resolution of these patches and introducing controlled variability to the coreset. Our extensive experiments demonstrate the robustness and efficiency of our approach across a range of dataset distillation benchmarks. We demonstrate a significant improvement of over 10% compared to the state-of-the-art on several large-scale dataset distillation benchmarks. The code will be released soon.

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Understanding Learning with Sliced-Wasserstein Requires Rethinking Informative Slices

The practical applications of Wasserstein distances (WDs) are constrained by their sample and computational complexities. Sliced-Wasserstein distances (SWDs) provide a workaround by projecting distributions onto one-dimensional subspaces, leveraging the more efficient, closed-form WDs for one-dimensional distributions. However, in high dimensions, most random projections become uninformative due to the concentration of measure phenomenon. Although several SWD variants have been proposed to focus on \textit{informative} slices, they often introduce additional complexity, numerical instability, and compromise desirable theoretical (metric) properties of SWD. Amidst the growing literature that focuses on directly modifying the slicing distribution, which often face challenges, we revisit the classical Sliced-Wasserstein and propose instead to rescale the 1D Wasserstein to make all slices equally informative. Importantly, we show that with an appropriate data assumption and notion of \textit{slice informativeness}, rescaling for all individual slices simplifies to \textbf{a single global scaling factor} on the SWD. This, in turn, translates to the standard learning rate search for gradient-based learning in common machine learning workflows. We perform extensive experiments across various machine learning tasks showing that the classical SWD, when properly configured, can often match or surpass the performance of more complex variants. We then answer the following question: "Is Sliced-Wasserstein all you need for common learning tasks?"

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Linear Spherical Sliced Optimal Transport: A Fast Metric for Comparing Spherical Data

Efficient comparison of spherical probability distributions becomes important in fields such as computer vision, geosciences, and medicine. Sliced optimal transport distances, such as spherical and stereographic spherical sliced Wasserstein distances, have recently been developed to address this need. These methods reduce the computational burden of optimal transport by slicing hyperspheres into one-dimensional projections, i.e., lines or circles. Concurrently, linear optimal transport has been proposed to embed distributions into \( L^2 \) spaces, where the \( L^2 \) distance approximates the optimal transport distance, thereby simplifying comparisons across multiple distributions. In this work, we introduce the Linear Spherical Sliced Optimal Transport (LSSOT) framework, which utilizes slicing to embed spherical distributions into \( L^2 \) spaces while preserving their intrinsic geometry, offering a computationally efficient metric for spherical probability measures. We establish the metricity of LSSOT and demonstrate its superior computational efficiency in applications such as cortical surface registration, 3D point cloud interpolation via gradient flow, and shape embedding. Our results demonstrate the significant computational benefits and high accuracy of LSSOT in these applications.

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