arXiv subjects

Songfang Huang

Publications and source records attributed to Songfang Huang.

At least 55 records · Page 3Linked to original sources

arXiv2022

Code Synonyms Do Matter: Multiple Synonyms Matching Network for Automatic ICD Coding

Automatic ICD coding is defined as assigning disease codes to electronic medical records (EMRs). Existing methods usually apply label attention with code representations to match related text snippets. Unlike these works that model the label with the code hierarchy or description, we argue that the code synonyms can provide more comprehensive knowledge based on the observation that the code expressions in EMRs vary from their descriptions in ICD. By aligning codes to concepts in UMLS, we collect synonyms of every code. Then, we propose a multiple synonyms matching network to leverage synonyms for better code representation learning, and finally help the code classification. Experiments on the MIMIC-III dataset show that our proposed method outperforms previous state-of-the-art methods.

cs.CL↗

arXiv2021

From Dense to Sparse: Contrastive Pruning for Better Pre-trained Language Model Compression

Pre-trained Language Models (PLMs) have achieved great success in various Natural Language Processing (NLP) tasks under the pre-training and fine-tuning paradigm. With large quantities of parameters, PLMs are computation-intensive and resource-hungry. Hence, model pruning has been introduced to compress large-scale PLMs. However, most prior approaches only consider task-specific knowledge towards downstream tasks, but ignore the essential task-agnostic knowledge during pruning, which may cause catastrophic forgetting problem and lead to poor generalization ability. To maintain both task-agnostic and task-specific knowledge in our pruned model, we propose ContrAstive Pruning (CAP) under the paradigm of pre-training and fine-tuning. It is designed as a general framework, compatible with both structured and unstructured pruning. Unified in contrastive learning, CAP enables the pruned model to learn from the pre-trained model for task-agnostic knowledge, and fine-tuned model for task-specific knowledge. Besides, to better retain the performance of the pruned model, the snapshots (i.e., the intermediate models at each pruning iteration) also serve as effective supervisions for pruning. Our extensive experiments show that adopting CAP consistently yields significant improvements, especially in extremely high sparsity scenarios. With only 3% model parameters reserved (i.e., 97% sparsity), CAP successfully achieves 99.2% and 96.3% of the original BERT performance in QQP and MNLI tasks. In addition, our probing experiments demonstrate that the model pruned by CAP tends to achieve better generalization ability.

cs.CL↗

arXiv2021

Achieving Human Parity on Visual Question Answering

The Visual Question Answering (VQA) task utilizes both visual image and language analysis to answer a textual question with respect to an image. It has been a popular research topic with an increasing number of real-world applications in the last decade. This paper describes our recent research of AliceMind-MMU (ALIbaba's Collection of Encoder-decoders from Machine IntelligeNce lab of Damo academy - MultiMedia Understanding) that obtains similar or even slightly better results than human being does on VQA. This is achieved by systematically improving the VQA pipeline including: (1) pre-training with comprehensive visual and textual feature representation; (2) effective cross-modal interaction with learning to attend; and (3) A novel knowledge mining framework with specialized expert modules for the complex VQA task. Treating different types of visual questions with corresponding expertise needed plays an important role in boosting the performance of our VQA architecture up to the human level. An extensive set of experiments and analysis are conducted to demonstrate the effectiveness of the new research work.

cs.CL↗

arXiv2021

A Chinese Multi-type Complex Questions Answering Dataset over Wikidata

Complex Knowledge Base Question Answering is a popular area of research in the past decade. Recent public datasets have led to encouraging results in this field, but are mostly limited to English and only involve a small number of question types and relations, hindering research in more realistic settings and in languages other than English. In addition, few state-of-the-art KBQA models are trained on Wikidata, one of the most popular real-world knowledge bases. We propose CLC-QuAD, the first large scale complex Chinese semantic parsing dataset over Wikidata to address these challenges. Together with the dataset, we present a text-to-SPARQL baseline model, which can effectively answer multi-type complex questions, such as factual questions, dual intent questions, boolean questions, and counting questions, with Wikidata as the background knowledge. We finally analyze the performance of SOTA KBQA models on this dataset and identify the challenges facing Chinese KBQA.

cs.CL↗

arXiv2021

Raise a Child in Large Language Model: Towards Effective and Generalizable Fine-tuning

Recent pretrained language models extend from millions to billions of parameters. Thus the need to fine-tune an extremely large pretrained model with a limited training corpus arises in various downstream tasks. In this paper, we propose a straightforward yet effective fine-tuning technique, Child-Tuning, which updates a subset of parameters (called child network) of large pretrained models via strategically masking out the gradients of the non-child network during the backward process. Experiments on various downstream tasks in GLUE benchmark show that Child-Tuning consistently outperforms the vanilla fine-tuning by 1.5~8.6 average score among four different pretrained models, and surpasses the prior fine-tuning techniques by 0.6~1.3 points. Furthermore, empirical results on domain transfer and task transfer show that Child-Tuning can obtain better generalization performance by large margins.

cs.CL↗

arXiv2021

Biomedical Question Answering: A Survey of Approaches and Challenges

Automatic Question Answering (QA) has been successfully applied in various domains such as search engines and chatbots. Biomedical QA (BQA), as an emerging QA task, enables innovative applications to effectively perceive, access and understand complex biomedical knowledge. There have been tremendous developments of BQA in the past two decades, which we classify into 5 distinctive approaches: classic, information retrieval, machine reading comprehension, knowledge base and question entailment approaches. In this survey, we introduce available datasets and representative methods of each BQA approach in detail. Despite the developments, BQA systems are still immature and rarely used in real-life settings. We identify and characterize several key challenges in BQA that might lead to this issue, and discuss some potential future directions to explore.

cs.CL↗

arXiv2021

E2E-VLP: End-to-End Vision-Language Pre-training Enhanced by Visual Learning

Vision-language pre-training (VLP) on large-scale image-text pairs has achieved huge success for the cross-modal downstream tasks. The most existing pre-training methods mainly adopt a two-step training procedure, which firstly employs a pre-trained object detector to extract region-based visual features, then concatenates the image representation and text embedding as the input of Transformer to train. However, these methods face problems of using task-specific visual representation of the specific object detector for generic cross-modal understanding, and the computation inefficiency of two-stage pipeline. In this paper, we propose the first end-to-end vision-language pre-trained model for both V+L understanding and generation, namely E2E-VLP, where we build a unified Transformer framework to jointly learn visual representation, and semantic alignments between image and text. We incorporate the tasks of object detection and image captioning into pre-training with a unified Transformer encoder-decoder architecture for enhancing visual learning. An extensive set of experiments have been conducted on well-established vision-language downstream tasks to demonstrate the effectiveness of this novel VLP paradigm.

cs.CV↗

arXiv2021

VECO: Variable and Flexible Cross-lingual Pre-training for Language Understanding and Generation

Existing work in multilingual pretraining has demonstrated the potential of cross-lingual transferability by training a unified Transformer encoder for multiple languages. However, much of this work only relies on the shared vocabulary and bilingual contexts to encourage the correlation across languages, which is loose and implicit for aligning the contextual representations between languages. In this paper, we plug a cross-attention module into the Transformer encoder to explicitly build the interdependence between languages. It can effectively avoid the degeneration of predicting masked words only conditioned on the context in its own language. More importantly, when fine-tuning on downstream tasks, the cross-attention module can be plugged in or out on-demand, thus naturally benefiting a wider range of cross-lingual tasks, from language understanding to generation. As a result, the proposed cross-lingual model delivers new state-of-the-art results on various cross-lingual understanding tasks of the XTREME benchmark, covering text classification, sequence labeling, question answering, and sentence retrieval. For cross-lingual generation tasks, it also outperforms all existing cross-lingual models and state-of-the-art Transformer variants on WMT14 English-to-German and English-to-French translation datasets, with gains of up to 1~2 BLEU.

cs.CL↗

arXiv2021

Lattice-BERT: Leveraging Multi-Granularity Representations in Chinese Pre-trained Language Models

Chinese pre-trained language models usually process text as a sequence of characters, while ignoring more coarse granularity, e.g., words. In this work, we propose a novel pre-training paradigm for Chinese -- Lattice-BERT, which explicitly incorporates word representations along with characters, thus can model a sentence in a multi-granularity manner. Specifically, we construct a lattice graph from the characters and words in a sentence and feed all these text units into transformers. We design a lattice position attention mechanism to exploit the lattice structures in self-attention layers. We further propose a masked segment prediction task to push the model to learn from rich but redundant information inherent in lattices, while avoiding learning unexpected tricks. Experiments on 11 Chinese natural language understanding tasks show that our model can bring an average increase of 1.5% under the 12-layer setting, which achieves new state-of-the-art among base-size models on the CLUE benchmarks. Further analysis shows that Lattice-BERT can harness the lattice structures, and the improvement comes from the exploration of redundant information and multi-granularity representations. Our code will be available at https://github.com/alibaba/pretrained-language-models/LatticeBERT.

cs.CL↗

arXiv2021

StructuralLM: Structural Pre-training for Form Understanding

Large pre-trained language models achieve state-of-the-art results when fine-tuned on downstream NLP tasks. However, they almost exclusively focus on text-only representation, while neglecting cell-level layout information that is important for form image understanding. In this paper, we propose a new pre-training approach, StructuralLM, to jointly leverage cell and layout information from scanned documents. Specifically, we pre-train StructuralLM with two new designs to make the most of the interactions of cell and layout information: 1) each cell as a semantic unit; 2) classification of cell positions. The pre-trained StructuralLM achieves new state-of-the-art results in different types of downstream tasks, including form understanding (from 78.95 to 85.14), document visual question answering (from 72.59 to 83.94) and document image classification (from 94.43 to 96.08).

cs.CL↗

arXiv2021

Improving Biomedical Pretrained Language Models with Knowledge

Pretrained language models have shown success in many natural language processing tasks. Many works explore incorporating knowledge into language models. In the biomedical domain, experts have taken decades of effort on building large-scale knowledge bases. For example, the Unified Medical Language System (UMLS) contains millions of entities with their synonyms and defines hundreds of relations among entities. Leveraging this knowledge can benefit a variety of downstream tasks such as named entity recognition and relation extraction. To this end, we propose KeBioLM, a biomedical pretrained language model that explicitly leverages knowledge from the UMLS knowledge bases. Specifically, we extract entities from PubMed abstracts and link them to UMLS. We then train a knowledge-aware language model that firstly applies a text-only encoding layer to learn entity representation and applies a text-entity fusion encoding to aggregate entity representation. Besides, we add two training objectives as entity detection and entity linking. Experiments on the named entity recognition and relation extraction from the BLURB benchmark demonstrate the effectiveness of our approach. Further analysis on a collected probing dataset shows that our model has better ability to model medical knowledge.

cs.CL↗

arXiv2021

Automated Conformance Testing for JavaScript Engines via Deep Compiler Fuzzing

JavaScript (JS) is a popular, platform-independent programming language. To ensure the interoperability of JS programs across different platforms, the implementation of a JS engine should conform to the ECMAScript standard. However, doing so is challenging as there are many subtle definitions of API behaviors, and the definitions keep evolving. We present COMFORT, a new compiler fuzzing framework for detecting JS engine bugs and behaviors that deviate from the ECMAScript standard. COMFORT leverages the recent advance in deep learning-based language models to automatically generate JS test code. As a departure from prior fuzzers, COMFORT utilizes the well-structured ECMAScript specifications to automatically generate test data along with the test programs to expose bugs that could be overlooked by the developers or manually written test cases. COMFORT then applies differential testing methodologies on the generated test cases to expose standard conformance bugs. We apply COMFORT to ten mainstream JS engines. In 200 hours of automated concurrent testing runs, we discover bugs in all tested JS engines. We had identified 158 unique JS engine bugs, of which 129 have been verified, and 115 have already been fixed by the developers. Furthermore, 21 of the Comfort-generated test cases have been added to Test262, the official ECMAScript conformance test suite.

cs.SE↗

arXiv2021

Noisy-Labeled NER with Confidence Estimation

Recent studies in deep learning have shown significant progress in named entity recognition (NER). Most existing works assume clean data annotation, yet a fundamental challenge in real-world scenarios is the large amount of noise from a variety of sources (e.g., pseudo, weak, or distant annotations). This work studies NER under a noisy labeled setting with calibrated confidence estimation. Based on empirical observations of different training dynamics of noisy and clean labels, we propose strategies for estimating confidence scores based on local and global independence assumptions. We partially marginalize out labels of low confidence with a CRF model. We further propose a calibration method for confidence scores based on the structure of entity labels. We integrate our approach into a self-training framework for boosting performance. Experiments in general noisy settings with four languages and distantly labeled settings demonstrate the effectiveness of our method. Our code can be found at https://github.com/liukun95/Noisy-NER-Confidence-Estimation

cs.CL↗

arXiv2021

SemVLP: Vision-Language Pre-training by Aligning Semantics at Multiple Levels

Vision-language pre-training (VLP) on large-scale image-text pairs has recently witnessed rapid progress for learning cross-modal representations. Existing pre-training methods either directly concatenate image representation and text representation at a feature level as input to a single-stream Transformer, or use a two-stream cross-modal Transformer to align the image-text representation at a high-level semantic space. In real-world image-text data, we observe that it is easy for some of the image-text pairs to align simple semantics on both modalities, while others may be related after higher-level abstraction. Therefore, in this paper, we propose a new pre-training method SemVLP, which jointly aligns both the low-level and high-level semantics between image and text representations. The model is pre-trained iteratively with two prevalent fashions: single-stream pre-training to align at a fine-grained feature level and two-stream pre-training to align high-level semantics, by employing a shared Transformer network with a pluggable cross-modal attention module. An extensive set of experiments have been conducted on four well-established vision-language understanding tasks to demonstrate the effectiveness of the proposed SemVLP in aligning cross-modal representations towards different semantic granularities.

cs.CL↗

arXiv2021

Contrastive Prototype Learning with Augmented Embeddings for Few-Shot Learning

Most recent few-shot learning (FSL) methods are based on meta-learning with episodic training. In each meta-training episode, a discriminative feature embedding and/or classifier are first constructed from a support set in an inner loop, and then evaluated in an outer loop using a query set for model updating. This query set sample centered learning objective is however intrinsically limited in addressing the lack of training data problem in the support set. In this paper, a novel contrastive prototype learning with augmented embeddings (CPLAE) model is proposed to overcome this limitation. First, data augmentations are introduced to both the support and query sets with each sample now being represented as an augmented embedding (AE) composed of concatenated embeddings of both the original and augmented versions. Second, a novel support set class prototype centered contrastive loss is proposed for contrastive prototype learning (CPL). With a class prototype as an anchor, CPL aims to pull the query samples of the same class closer and those of different classes further away. This support set sample centered loss is highly complementary to the existing query centered loss, fully exploiting the limited training data in each episode. Extensive experiments on several benchmarks demonstrate that our proposed CPLAE achieves new state-of-the-art.

cs.CV↗

arXiv2020

Nested Named Entity Recognition with Partially-Observed TreeCRFs

Named entity recognition (NER) is a well-studied task in natural language processing. However, the widely-used sequence labeling framework is difficult to detect entities with nested structures. In this work, we view nested NER as constituency parsing with partially-observed trees and model it with partially-observed TreeCRFs. Specifically, we view all labeled entity spans as observed nodes in a constituency tree, and other spans as latent nodes. With the TreeCRF we achieve a uniform way to jointly model the observed and the latent nodes. To compute the probability of partial trees with partial marginalization, we propose a variant of the Inside algorithm, the \textsc{Masked Inside} algorithm, that supports different inference operations for different nodes (evaluation for the observed, marginalization for the latent, and rejection for nodes incompatible with the observed) with efficient parallelized implementation, thus significantly speeding up training and inference. Experiments show that our approach achieves the state-of-the-art (SOTA) F1 scores on the ACE2004, ACE2005 dataset, and shows comparable performance to SOTA models on the GENIA dataset. Our approach is implemented at: \url{https://github.com/FranxYao/Partially-Observed-TreeCRFs}.

cs.CL↗

arXiv2020

Predicting Clinical Trial Results by Implicit Evidence Integration

Clinical trials provide essential guidance for practicing Evidence-Based Medicine, though often accompanying with unendurable costs and risks. To optimize the design of clinical trials, we introduce a novel Clinical Trial Result Prediction (CTRP) task. In the CTRP framework, a model takes a PICO-formatted clinical trial proposal with its background as input and predicts the result, i.e. how the Intervention group compares with the Comparison group in terms of the measured Outcome in the studied Population. While structured clinical evidence is prohibitively expensive for manual collection, we exploit large-scale unstructured sentences from medical literature that implicitly contain PICOs and results as evidence. Specifically, we pre-train a model to predict the disentangled results from such implicit evidence and fine-tune the model with limited data on the downstream datasets. Experiments on the benchmark Evidence Integration dataset show that the proposed model outperforms the baselines by large margins, e.g., with a 10.7% relative gain over BioBERT in macro-F1. Moreover, the performance improvement is also validated on another dataset composed of clinical trials related to COVID-19.

cs.CL↗

arXiv2020

PALM: Pre-training an Autoencoding&Autoregressive Language Model for Context-conditioned Generation

Self-supervised pre-training, such as BERT, MASS and BART, has emerged as a powerful technique for natural language understanding and generation. Existing pre-training techniques employ autoencoding and/or autoregressive objectives to train Transformer-based models by recovering original word tokens from corrupted text with some masked tokens. The training goals of existing techniques are often inconsistent with the goals of many language generation tasks, such as generative question answering and conversational response generation, for producing new text given context. This work presents PALM with a novel scheme that jointly pre-trains an autoencoding and autoregressive language model on a large unlabeled corpus, specifically designed for generating new text conditioned on context. The new scheme alleviates the mismatch introduced by the existing denoising scheme between pre-training and fine-tuning where generation is more than reconstructing original text. An extensive set of experiments show that PALM achieves new state-of-the-art results on a variety of language generation benchmarks covering generative question answering (Rank 1 on the official MARCO leaderboard), abstractive summarization on CNN/DailyMail as well as Gigaword, question generation on SQuAD, and conversational response generation on Cornell Movie Dialogues.

cs.CL↗