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Soumik Sarkar

Publications and source records attributed to Soumik Sarkar.

At least 73 records · Page 4Linked to original sources

DIMAT: Decentralized Iterative Merging-And-Training for Deep Learning Models

Recent advances in decentralized deep learning algorithms have demonstrated cutting-edge performance on various tasks with large pre-trained models. However, a pivotal prerequisite for achieving this level of competitiveness is the significant communication and computation overheads when updating these models, which prohibits the applications of them to real-world scenarios. To address this issue, drawing inspiration from advanced model merging techniques without requiring additional training, we introduce the Decentralized Iterative Merging-And-Training (DIMAT) paradigm--a novel decentralized deep learning framework. Within DIMAT, each agent is trained on their local data and periodically merged with their neighboring agents using advanced model merging techniques like activation matching until convergence is achieved. DIMAT provably converges with the best available rate for nonconvex functions with various first-order methods, while yielding tighter error bounds compared to the popular existing approaches. We conduct a comprehensive empirical analysis to validate DIMAT's superiority over baselines across diverse computer vision tasks sourced from multiple datasets. Empirical results validate our theoretical claims by showing that DIMAT attains faster and higher initial gain in accuracy with independent and identically distributed (IID) and non-IID data, incurring lower communication overhead. This DIMAT paradigm presents a new opportunity for the future decentralized learning, enhancing its adaptability to real-world with sparse and light-weight communication and computation.

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Vision-Language Models can Identify Distracted Driver Behavior from Naturalistic Videos

Recognizing the activities causing distraction in real-world driving scenarios is critical for ensuring the safety and reliability of both drivers and pedestrians on the roadways. Conventional computer vision techniques are typically data-intensive and require a large volume of annotated training data to detect and classify various distracted driving behaviors, thereby limiting their efficiency and scalability. We aim to develop a generalized framework that showcases robust performance with access to limited or no annotated training data. Recently, vision-language models have offered large-scale visual-textual pretraining that can be adapted to task-specific learning like distracted driving activity recognition. Vision-language pretraining models, such as CLIP, have shown significant promise in learning natural language-guided visual representations. This paper proposes a CLIP-based driver activity recognition approach that identifies driver distraction from naturalistic driving images and videos. CLIP's vision embedding offers zero-shot transfer and task-based finetuning, which can classify distracted activities from driving video data. Our results show that this framework offers state-of-the-art performance on zero-shot transfer and video-based CLIP for predicting the driver's state on two public datasets. We propose both frame-based and video-based frameworks developed on top of the CLIP's visual representation for distracted driving detection and classification tasks and report the results.

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Multi-Sensor and Multi-temporal High-Throughput Phenotyping for Monitoring and Early Detection of Water-Limiting Stress in Soybean

Soybean production is susceptible to biotic and abiotic stresses, exacerbated by extreme weather events. Water limiting stress, i.e. drought, emerges as a significant risk for soybean production, underscoring the need for advancements in stress monitoring for crop breeding and production. This project combines multi-modal information to identify the most effective and efficient automated methods to investigate drought response. We investigated a set of diverse soybean accessions using multiple sensors in a time series high-throughput phenotyping manner to: (1) develop a pipeline for rapid classification of soybean drought stress symptoms, and (2) investigate methods for early detection of drought stress. We utilized high-throughput time-series phenotyping using UAVs and sensors in conjunction with machine learning (ML) analytics, which offered a swift and efficient means of phenotyping. The red-edge and green bands were most effective to classify canopy wilting stress. The Red-Edge Chlorophyll Vegetation Index (RECI) successfully differentiated susceptible and tolerant soybean accessions prior to visual symptom development. We report pre-visual detection of soybean wilting using a combination of different vegetation indices. These results can contribute to early stress detection methodologies and rapid classification of drought responses in screening nurseries for breeding and production applications.

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Smart Connected Farms and Networked Farmers to Tackle Climate Challenges Impacting Agricultural Production

To meet the grand challenges of agricultural production including climate change impacts on crop production, a tight integration of social science, technology and agriculture experts including farmers are needed. There are rapid advances in information and communication technology, precision agriculture and data analytics, which are creating a fertile field for the creation of smart connected farms (SCF) and networked farmers. A network and coordinated farmer network provides unique advantages to farmers to enhance farm production and profitability, while tackling adverse climate events. The aim of this article is to provide a comprehensive overview of the state of the art in SCF including the advances in engineering, computer sciences, data sciences, social sciences and economics including data privacy, sharing and technology adoption.

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Latent Diffusion Models for Structural Component Design

Recent advances in generative modeling, namely Diffusion models, have revolutionized generative modeling, enabling high-quality image generation tailored to user needs. This paper proposes a framework for the generative design of structural components. Specifically, we employ a Latent Diffusion model to generate potential designs of a component that can satisfy a set of problem-specific loading conditions. One of the distinct advantages our approach offers over other generative approaches, such as generative adversarial networks (GANs), is that it permits the editing of existing designs. We train our model using a dataset of geometries obtained from structural topology optimization utilizing the SIMP algorithm. Consequently, our framework generates inherently near-optimal designs. Our work presents quantitative results that support the structural performance of the generated designs and the variability in potential candidate designs. Furthermore, we provide evidence of the scalability of our framework by operating over voxel domains with resolutions varying from $32^3$ to $128^3$. Our framework can be used as a starting point for generating novel near-optimal designs similar to topology-optimized designs.

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Active shooter detection and robust tracking utilizing supplemental synthetic data

The increasing concern surrounding gun violence in the United States has led to a focus on developing systems to improve public safety. One approach to developing such a system is to detect and track shooters, which would help prevent or mitigate the impact of violent incidents. In this paper, we proposed detecting shooters as a whole, rather than just guns, which would allow for improved tracking robustness, as obscuring the gun would no longer cause the system to lose sight of the threat. However, publicly available data on shooters is much more limited and challenging to create than a gun dataset alone. Therefore, we explore the use of domain randomization and transfer learning to improve the effectiveness of training with synthetic data obtained from Unreal Engine environments. This enables the model to be trained on a wider range of data, increasing its ability to generalize to different situations. Using these techniques with YOLOv8 and Deep OC-SORT, we implemented an initial version of a shooter tracking system capable of running on edge hardware, including both a Raspberry Pi and a Jetson Nano.

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Deep learning powered real-time identification of insects using citizen science data

Insect-pests significantly impact global agricultural productivity and quality. Effective management involves identifying the full insect community, including beneficial insects and harmful pests, to develop and implement integrated pest management strategies. Automated identification of insects under real-world conditions presents several challenges, including differentiating similar-looking species, intra-species dissimilarity and inter-species similarity, several life cycle stages, camouflage, diverse imaging conditions, and variability in insect orientation. A deep-learning model, InsectNet, is proposed to address these challenges. InsectNet is endowed with five key features: (a) utilization of a large dataset of insect images collected through citizen science; (b) label-free self-supervised learning for large models; (c) improving prediction accuracy for species with a small sample size; (d) enhancing model trustworthiness; and (e) democratizing access through streamlined MLOps. This approach allows accurate identification (>96% accuracy) of over 2500 insect species, including pollinator (e.g., butterflies, bees), parasitoid (e.g., some wasps and flies), predator species (e.g., lady beetles, mantises, dragonflies) and harmful pest species (e.g., armyworms, cutworms, grasshoppers, stink bugs). InsectNet can identify invasive species, provide fine-grained insect species identification, and work effectively in challenging backgrounds. It also can abstain from making predictions when uncertain, facilitating seamless human intervention and making it a practical and trustworthy tool. InsectNet can guide citizen science data collection, especially for invasive species where early detection is crucial. Similar approaches may transform other agricultural challenges like disease detection and underscore the importance of data collection, particularly through citizen science efforts..

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Out-of-distribution detection algorithms for robust insect classification

Deep learning-based approaches have produced models with good insect classification accuracy; Most of these models are conducive for application in controlled environmental conditions. One of the primary emphasis of researchers is to implement identification and classification models in the real agriculture fields, which is challenging because input images that are wildly out of the distribution (e.g., images like vehicles, animals, humans, or a blurred image of an insect or insect class that is not yet trained on) can produce an incorrect insect classification. Out-of-distribution (OOD) detection algorithms provide an exciting avenue to overcome these challenge as it ensures that a model abstains from making incorrect classification prediction of non-insect and/or untrained insect class images. We generate and evaluate the performance of state-of-the-art OOD algorithms on insect detection classifiers. These algorithms represent a diversity of methods for addressing an OOD problem. Specifically, we focus on extrusive algorithms, i.e., algorithms that wrap around a well-trained classifier without the need for additional co-training. We compared three OOD detection algorithms: (i) Maximum Softmax Probability, which uses the softmax value as a confidence score, (ii) Mahalanobis distance-based algorithm, which uses a generative classification approach; and (iii) Energy-Based algorithm that maps the input data to a scalar value, called energy. We performed an extensive series of evaluations of these OOD algorithms across three performance axes: (a) \textit{Base model accuracy}: How does the accuracy of the classifier impact OOD performance? (b) How does the \textit{level of dissimilarity to the domain} impact OOD performance? and (c) \textit{Data imbalance}: How sensitive is OOD performance to the imbalance in per-class sample size?

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SpecXAI -- Spectral interpretability of Deep Learning Models

Deep learning is becoming increasingly adopted in business and industry due to its ability to transform large quantities of data into high-performing models. These models, however, are generally regarded as black boxes, which, in spite of their performance, could prevent their use. In this context, the field of eXplainable AI attempts to develop techniques that temper the impenetrable nature of the models and promote a level of understanding of their behavior. Here we present our contribution to XAI methods in the form of a framework that we term SpecXAI, which is based on the spectral characterization of the entire network. We show how this framework can be used to not only understand the network but also manipulate it into a linear interpretable symbolic representation.

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3D Reconstruction of Protein Complex Structures Using Synthesized Multi-View AFM Images

Recent developments in deep learning-based methods demonstrated its potential to predict the 3D protein structures using inputs such as protein sequences, Cryo-Electron microscopy (Cryo-EM) images of proteins, etc. However, these methods struggle to predict the protein complexes (PC), structures with more than one protein. In this work, we explore the atomic force microscope (AFM) assisted deep learning-based methods to predict the 3D structure of PCs. The images produced by AFM capture the protein structure in different and random orientations. These multi-view images can help train the neural network to predict the 3D structure of protein complexes. However, obtaining the dataset of actual AFM images is time-consuming and not a pragmatic task. We propose a virtual AFM imaging pipeline that takes a 'PDB' protein file and generates multi-view 2D virtual AFM images using volume rendering techniques. With this, we created a dataset of around 8K proteins. We train a neural network for 3D reconstruction called Pix2Vox++ using the synthesized multi-view 2D AFM images dataset. We compare the predicted structure obtained using a different number of views and get the intersection over union (IoU) value of 0.92 on the training dataset and 0.52 on the validation dataset. We believe this approach will lead to better prediction of the structure of protein complexes.

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Neural PDE Solvers for Irregular Domains

Neural network-based approaches for solving partial differential equations (PDEs) have recently received special attention. However, the large majority of neural PDE solvers only apply to rectilinear domains, and do not systematically address the imposition of Dirichlet/Neumann boundary conditions over irregular domain boundaries. In this paper, we present a framework to neurally solve partial differential equations over domains with irregularly shaped (non-rectilinear) geometric boundaries. Our network takes in the shape of the domain as an input (represented using an unstructured point cloud, or any other parametric representation such as Non-Uniform Rational B-Splines) and is able to generalize to novel (unseen) irregular domains; the key technical ingredient to realizing this model is a novel approach for identifying the interior and exterior of the computational grid in a differentiable manner. We also perform a careful error analysis which reveals theoretical insights into several sources of error incurred in the model-building process. Finally, we showcase a wide variety of applications, along with favorable comparisons with ground truth solutions.

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Algorithmically-Consistent Deep Learning Frameworks for Structural Topology Optimization

Topology optimization has emerged as a popular approach to refine a component's design and increase its performance. However, current state-of-the-art topology optimization frameworks are compute-intensive, mainly due to multiple finite element analysis iterations required to evaluate the component's performance during the optimization process. Recently, machine learning (ML)-based topology optimization methods have been explored by researchers to alleviate this issue. However, previous ML approaches have mainly been demonstrated on simple two-dimensional applications with low-resolution geometry. Further, current methods are based on a single ML model for end-to-end prediction, which requires a large dataset for training. These challenges make it non-trivial to extend current approaches to higher resolutions. In this paper, we develop deep learning-based frameworks consistent with traditional topology optimization algorithms for 3D topology optimization with a reasonably fine (high) resolution. We achieve this by training multiple networks, each learning a different step of the overall topology optimization methodology, making the framework more consistent with the topology optimization algorithm. We demonstrate the application of our framework on both 2D and 3D geometries. The results show that our approach predicts the final optimized design better (5.76x reduction in total compliance MSE in 2D; 2.03x reduction in total compliance MSE in 3D) than current ML-based topology optimization methods.

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Distributed Online Non-convex Optimization with Composite Regret

Regret has been widely adopted as the metric of choice for evaluating the performance of online optimization algorithms for distributed, multi-agent systems. However, data/model variations associated with agents can significantly impact decisions and requires consensus among agents. Moreover, most existing works have focused on developing approaches for (either strongly or non-strongly) convex losses, and very few results have been obtained regarding regret bounds in distributed online optimization for general non-convex losses. To address these two issues, we propose a novel composite regret with a new network regret-based metric to evaluate distributed online optimization algorithms. We concretely define static and dynamic forms of the composite regret. By leveraging the dynamic form of our composite regret, we develop a consensus-based online normalized gradient (CONGD) approach for pseudo-convex losses, and it provably shows a sublinear behavior relating to a regularity term for the path variation of the optimizer. For general non-convex losses, we first shed light on the regret for the setting of distributed online non-convex learning based on recent advances such that no deterministic algorithm can achieve the sublinear regret. We then develop the distributed online non-convex optimization with composite regret (DINOCO) without access to the gradients, depending on an offline optimization oracle. DINOCO is shown to achieve sublinear regret; to our knowledge, this is the first regret bound for general distributed online non-convex learning.

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Sugar and Stops in Drivers with Insulin-Dependent Type 1 Diabetes

Diabetes is a major public health challenge worldwide. Abnormal physiology in diabetes, particularly hypoglycemia, can cause driver impairments that affect safe driving. While diabetes driver safety has been previously researched, few studies link real-time physiologic changes in drivers with diabetes to objective real-world driver safety, particularly at high-risk areas like intersections. To address this, we investigated the role of acute physiologic changes in drivers with type 1 diabetes mellitus (T1DM) on safe stopping at stop intersections. 18 T1DM drivers (21-52 years, mean = 31.2 years) and 14 controls (21-55 years, mean = 33.4 years) participated in a 4-week naturalistic driving study. At induction, each participant's vehicle was fitted with a camera and sensor system to collect driving data. Video was processed with computer vision algorithms detecting traffic elements. Stop intersections were geolocated with clustering methods, state intersection databases, and manual review. Videos showing driver stop intersection approaches were extracted and manually reviewed to classify stopping behavior (full, rolling, and no stop) and intersection traffic characteristics. Mixed-effects logistic regression models determined how diabetes driver stopping safety (safe vs. unsafe stop) was affected by 1) disease and 2) at-risk, acute physiology (hypo- and hyperglycemia). Diabetes drivers who were acutely hyperglycemic had 2.37 increased odds of unsafe stopping (95% CI: 1.26-4.47, p = 0.008) compared to those with normal physiology. Acute hypoglycemia did not associate with unsafe stopping (p = 0.537), however the lower frequency of hypoglycemia (vs. hyperglycemia) warrants a larger sample of drivers to investigate this effect. Critically, presence of diabetes alone did not associate with unsafe stopping, underscoring the need to evaluate driver physiology in licensing guidelines.

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Asynchronous Training Schemes in Distributed Learning with Time Delay

In the context of distributed deep learning, the issue of stale weights or gradients could result in poor algorithmic performance. This issue is usually tackled by delay tolerant algorithms with some mild assumptions on the objective functions and step sizes. In this paper, we propose a different approach to develop a new algorithm, called $\textbf{P}$redicting $\textbf{C}$lipping $\textbf{A}$synchronous $\textbf{S}$tochastic $\textbf{G}$radient $\textbf{D}$escent (aka, PC-ASGD). Specifically, PC-ASGD has two steps - the $\textit{predicting step}$ leverages the gradient prediction using Taylor expansion to reduce the staleness of the outdated weights while the $\textit{clipping step}$ selectively drops the outdated weights to alleviate their negative effects. A tradeoff parameter is introduced to balance the effects between these two steps. Theoretically, we present the convergence rate considering the effects of delay of the proposed algorithm with constant step size when the smooth objective functions are weakly strongly-convex and nonconvex. One practical variant of PC-ASGD is also proposed by adopting a condition to help with the determination of the tradeoff parameter. For empirical validation, we demonstrate the performance of the algorithm with two deep neural network architectures on two benchmark datasets.

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A Deep Learning Approach to Detect Lean Blowout in Combustion Systems

Lean combustion is environment friendly with low NOx emissions and also provides better fuel efficiency in a combustion system. However, approaching towards lean combustion can make engines more susceptible to lean blowout. Lean blowout (LBO) is an undesirable phenomenon that can cause sudden flame extinction leading to sudden loss of power. During the design stage, it is quite challenging for the scientists to accurately determine the optimal operating limits to avoid sudden LBO occurrence. Therefore, it is crucial to develop accurate and computationally tractable frameworks for online LBO detection in low NOx emission engines. To the best of our knowledge, for the first time, we propose a deep learning approach to detect lean blowout in combustion systems. In this work, we utilize a laboratory-scale combustor to collect data for different protocols. We start far from LBO for each protocol and gradually move towards the LBO regime, capturing a quasi-static time series dataset at each condition. Using one of the protocols in our dataset as the reference protocol and with conditions annotated by domain experts, we find a transition state metric for our trained deep learning model to detect LBO in the other test protocols. We find that our proposed approach is more accurate and computationally faster than other baseline models to detect the transitions to LBO. Therefore, we recommend this method for real-time performance monitoring in lean combustion engines.

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Glucose Control, Sleep, Obesity, and Real-World Driver Safety at Stop Intersections in Type 1 Diabetes

Background: Diabetes is associated with obesity, poor glucose control and sleep dysfunction which impair cognitive and psychomotor functions, and, in turn, increase driver risk. How this risk plays out in the real-world driving settings is terra incognita. Addressing this knowledge gap requires comprehensive observations of diabetes driver behavior and physiology in challenging settings where crashes are more likely to occur, such as stop-controlled traffic intersections, as in the current study of drivers with Type 1 Diabetes (T1DM). Methods: 32 active drivers from around Omaha, NE participated in 4-week, real-world study. Each participant's own vehicle was instrumented with an advanced telematics and camera system collecting driving sensor data and video. Videos were analyzed using computer vision models detecting traffic elements to identify stop signs. Stop sign detections and driver stopping trajectories were clustered to geolocate and extract driver-visited stop intersections. Driver videos were then annotated to record stopping behavior and key traffic characteristics. Stops were categorized as safe or unsafe based on traffic law. Results: Mixed effects logistic regression models examined how stopping behavior (safe vs. unsafe) in T1DM drivers was affected by 1) abnormal sleep, 2) obesity, and 3) poor glucose control. Model results indicate that one standard deviation increase in BMI (~7 points) in T1DM drivers associated with a 14.96 increase in unsafe stopping odds compared to similar controls. Abnormal sleep and glucose control were not associated with increased unsafe stopping. Conclusion: This study links chronic patterns of abnormal T1DM driver physiology, sleep, and health to driver safety risk at intersections, advancing models to identify real-world safety risk in diabetes drivers for clinical intervention and development of in-vehicle safety assistance technology.

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A Graph Policy Network Approach for Volt-Var Control in Power Distribution Systems

Volt-var control (VVC) is the problem of operating power distribution systems within healthy regimes by controlling actuators in power systems. Existing works have mostly adopted the conventional routine of representing the power systems (a graph with tree topology) as vectors to train deep reinforcement learning (RL) policies. We propose a framework that combines RL with graph neural networks and study the benefits and limitations of graph-based policy in the VVC setting. Our results show that graph-based policies converge to the same rewards asymptotically however at a slower rate when compared to vector representation counterpart. We conduct further analysis on the impact of both observations and actions: on the observation end, we examine the robustness of graph-based policy on two typical data acquisition errors in power systems, namely sensor communication failure and measurement misalignment. On the action end, we show that actuators have various impacts on the system, thus using a graph representation induced by power systems topology may not be the optimal choice. In the end, we conduct a case study to demonstrate that the choice of readout function architecture and graph augmentation can further improve training performance and robustness.

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