arXiv subjects

Soumik Sarkar

Publications and source records attributed to Soumik Sarkar.

At least 109 records · Page 6Linked to original sources

arXiv2020

Spatiotemporal Attention for Multivariate Time Series Prediction and Interpretation

Multivariate time series modeling and prediction problems are abundant in many machine learning application domains. Accurate interpretation of such prediction outcomes from a machine learning model that explicitly captures temporal correlations can significantly benefit the domain experts. In this context, temporal attention has been successfully applied to isolate the important time steps for the input time series. However, in multivariate time series problems, spatial interpretation is also critical to understand the contributions of different variables on the model outputs. We propose a novel deep learning architecture, called spatiotemporal attention mechanism (STAM) for simultaneous learning of the most important time steps and variables. STAM is a causal (i.e., only depends on past inputs and does not use future inputs) and scalable (i.e., scales well with an increase in the number of variables) approach that is comparable to the state-of-the-art models in terms of computational tractability. We demonstrate our models' performance on two popular public datasets and a domain-specific dataset. When compared with the baseline models, the results show that STAM maintains state-of-the-art prediction accuracy while offering the benefit of accurate spatiotemporal interpretability. The learned attention weights are validated from a domain knowledge perspective for these real-world datasets.

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arXiv2020

Few shot clustering for indoor occupancy detection with extremely low-quality images from battery free cameras

Reliable detection of human occupancy in indoor environments is critical for various energy efficiency, security, and safety applications. We consider this challenge of occupancy detection using extremely low-quality, privacy-preserving images from low power image sensors. We propose a combined few shot learning and clustering algorithm to address this challenge that has very low commissioning and maintenance cost. While the few shot learning concept enables us to commission our system with a few labeled examples, the clustering step serves the purpose of online adaptation to changing imaging environment over time. Apart from validating and comparing our algorithm on benchmark datasets, we also demonstrate performance of our algorithm on streaming images collected from real homes using our novel battery free camera hardware.

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arXiv2020

Deep Generative Models that Solve PDEs: Distributed Computing for Training Large Data-Free Models

Recent progress in scientific machine learning (SciML) has opened up the possibility of training novel neural network architectures that solve complex partial differential equations (PDEs). Several (nearly data free) approaches have been recently reported that successfully solve PDEs, with examples including deep feed forward networks, generative networks, and deep encoder-decoder networks. However, practical adoption of these approaches is limited by the difficulty in training these models, especially to make predictions at large output resolutions ($\geq 1024 \times 1024$). Here we report on a software framework for data parallel distributed deep learning that resolves the twin challenges of training these large SciML models - training in reasonable time as well as distributing the storage requirements. Our framework provides several out of the box functionality including (a) loss integrity independent of number of processes, (b) synchronized batch normalization, and (c) distributed higher-order optimization methods. We show excellent scalability of this framework on both cloud as well as HPC clusters, and report on the interplay between bandwidth, network topology and bare metal vs cloud. We deploy this approach to train generative models of sizes hitherto not possible, showing that neural PDE solvers can be viably trained for practical applications. We also demonstrate that distributed higher-order optimization methods are $2-3\times$ faster than stochastic gradient-based methods and provide minimal convergence drift with higher batch-size.

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arXiv2020

Robustifying Reinforcement Learning Agents via Action Space Adversarial Training

Adoption of machine learning (ML)-enabled cyber-physical systems (CPS) are becoming prevalent in various sectors of modern society such as transportation, industrial, and power grids. Recent studies in deep reinforcement learning (DRL) have demonstrated its benefits in a large variety of data-driven decisions and control applications. As reliance on ML-enabled systems grows, it is imperative to study the performance of these systems under malicious state and actuator attacks. Traditional control systems employ resilient/fault-tolerant controllers that counter these attacks by correcting the system via error observations. However, in some applications, a resilient controller may not be sufficient to avoid a catastrophic failure. Ideally, a robust approach is more useful in these scenarios where a system is inherently robust (by design) to adversarial attacks. While robust control has a long history of development, robust ML is an emerging research area that has already demonstrated its relevance and urgency. However, the majority of robust ML research has focused on perception tasks and not on decision and control tasks, although the ML (specifically RL) models used for control applications are equally vulnerable to adversarial attacks. In this paper, we show that a well-performing DRL agent that is initially susceptible to action space perturbations (e.g. actuator attacks) can be robustified against similar perturbations through adversarial training.

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arXiv2020

How useful is Active Learning for Image-based Plant Phenotyping?

Deep learning models have been successfully deployed for a diverse array of image-based plant phenotyping applications including disease detection and classification. However, successful deployment of supervised deep learning models requires large amount of labeled data, which is a significant challenge in plant science (and most biological) domains due to the inherent complexity. Specifically, data annotation is costly, laborious, time consuming and needs domain expertise for phenotyping tasks, especially for diseases. To overcome this challenge, active learning algorithms have been proposed that reduce the amount of labeling needed by deep learning models to achieve good predictive performance. Active learning methods adaptively select samples to annotate using an acquisition function to achieve maximum (classification) performance under a fixed labeling budget. We report the performance of four different active learning methods, (1) Deep Bayesian Active Learning (DBAL), (2) Entropy, (3) Least Confidence, and (4) Coreset, with conventional random sampling-based annotation for two different image-based classification datasets. The first image dataset consists of soybean [Glycine max L. (Merr.)] leaves belonging to eight different soybean stresses and a healthy class, and the second consists of nine different weed species from the field. For a fixed labeling budget, we observed that the classification performance of deep learning models with active learning-based acquisition strategies is better than random sampling-based acquisition for both datasets. The integration of active learning strategies for data annotation can help mitigate labelling challenges in the plant sciences applications particularly where deep domain knowledge is required.

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arXiv2020

Usefulness of interpretability methods to explain deep learning based plant stress phenotyping

Deep learning techniques have been successfully deployed for automating plant stress identification and quantification. In recent years, there is a growing push towards training models that are interpretable -i.e. that justify their classification decisions by visually highlighting image features that were crucial for classification decisions. The expectation is that trained network models utilize image features that mimic visual cues used by plant pathologists. In this work, we compare some of the most popular interpretability methods: Saliency Maps, SmoothGrad, Guided Backpropogation, Deep Taylor Decomposition, Integrated Gradients, Layer-wise Relevance Propagation and Gradient times Input, for interpreting the deep learning model. We train a DenseNet-121 network for the classification of eight different soybean stresses (biotic and abiotic). Using a dataset consisting of 16,573 RGB images of healthy and stressed soybean leaflets captured under controlled conditions, we obtained an overall classification accuracy of 95.05 \%. For a diverse subset of the test data, we compared the important features with those identified by a human expert. We observed that most interpretability methods identify the infected regions of the leaf as important features for some -- but not all -- of the correctly classified images. For some images, the output of the interpretability methods indicated that spurious feature correlations may have been used to correctly classify them. Although the output explanation maps of these interpretability methods may be different from each other for a given image, we advocate the use of these interpretability methods as `hypothesis generation' mechanisms that can drive scientific insight.

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arXiv2020

Crop Yield Prediction Integrating Genotype and Weather Variables Using Deep Learning

Accurate prediction of crop yield supported by scientific and domain-relevant insights, can help improve agricultural breeding, provide monitoring across diverse climatic conditions and thereby protect against climatic challenges to crop production including erratic rainfall and temperature variations. We used historical performance records from Uniform Soybean Tests (UST) in North America spanning 13 years of data to build a Long Short Term Memory - Recurrent Neural Network based model to dissect and predict genotype response in multiple-environments by leveraging pedigree relatedness measures along with weekly weather parameters. Additionally, for providing explainability of the important time-windows in the growing season, we developed a model based on temporal attention mechanism. The combination of these two models outperformed random forest (RF), LASSO regression and the data-driven USDA model for yield prediction. We deployed this deep learning framework as a 'hypotheses generation tool' to unravel GxExM relationships. Attention-based time series models provide a significant advancement in interpretability of yield prediction models. The insights provided by explainable models are applicable in understanding how plant breeding programs can adapt their approaches for global climate change, for example identification of superior varieties for commercial release, intelligent sampling of testing environments in variety development, and integrating weather parameters for a targeted breeding approach. Using DL models as hypothesis generation tools will enable development of varieties with plasticity response in variable climatic conditions. We envision broad applicability of this approach (via conducting sensitivity analysis and "what-if" scenarios) for soybean and other crop species under different climatic conditions.

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arXiv2019

Spatiotemporally Constrained Action Space Attacks on Deep Reinforcement Learning Agents

Robustness of Deep Reinforcement Learning (DRL) algorithms towards adversarial attacks in real world applications such as those deployed in cyber-physical systems (CPS) are of increasing concern. Numerous studies have investigated the mechanisms of attacks on the RL agent's state space. Nonetheless, attacks on the RL agent's action space (AS) (corresponding to actuators in engineering systems) are equally perverse; such attacks are relatively less studied in the ML literature. In this work, we first frame the problem as an optimization problem of minimizing the cumulative reward of an RL agent with decoupled constraints as the budget of attack. We propose a white-box Myopic Action Space (MAS) attack algorithm that distributes the attacks across the action space dimensions. Next, we reformulate the optimization problem above with the same objective function, but with a temporally coupled constraint on the attack budget to take into account the approximated dynamics of the agent. This leads to the white-box Look-ahead Action Space (LAS) attack algorithm that distributes the attacks across the action and temporal dimensions. Our results shows that using the same amount of resources, the LAS attack deteriorates the agent's performance significantly more than the MAS attack. This reveals the possibility that with limited resource, an adversary can utilize the agent's dynamics to malevolently craft attacks that causes the agent to fail. Additionally, we leverage these attack strategies as a possible tool to gain insights on the potential vulnerabilities of DRL agents.

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arXiv2019

Deep Reinforcement Learning for Adaptive Traffic Signal Control

Many existing traffic signal controllers are either simple adaptive controllers based on sensors placed around traffic intersections, or optimized by traffic engineers on a fixed schedule. Optimizing traffic controllers is time consuming and usually require experienced traffic engineers. Recent research has demonstrated the potential of using deep reinforcement learning (DRL) in this context. However, most of the studies do not consider realistic settings that could seamlessly transition into deployment. In this paper, we propose a DRL-based adaptive traffic signal control framework that explicitly considers realistic traffic scenarios, sensors, and physical constraints. In this framework, we also propose a novel reward function that shows significantly improved traffic performance compared to the typical baseline pre-timed and fully-actuated traffic signals controllers. The framework is implemented and validated on a simulation platform emulating real-life traffic scenarios and sensor data streams.

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arXiv2019

A perspective on multi-agent communication for information fusion

Collaborative decision making in multi-agent systems typically requires a predefined communication protocol among agents. Usually, agent-level observations are locally processed and information is exchanged using the predefined protocol, enabling the team to perform more efficiently than each agent operating in isolation. In this work, we consider the situation where agents, with complementary sensing modalities must co-operate to achieve a common goal/task by learning an efficient communication protocol. We frame the problem within an actor-critic scheme, where the agents learn optimal policies in a centralized fashion, while taking action in a distributed manner. We provide an interpretation of the emergent communication between the agents. We observe that the information exchanged is not just an encoding of the raw sensor data but is, rather, a specific set of directive actions that depend on the overall task. Simulation results demonstrate the interpretability of the learnt communication in a variety of tasks.

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arXiv2019

On Higher-order Moments in Adam

In this paper, we investigate the popular deep learning optimization routine, Adam, from the perspective of statistical moments. While Adam is an adaptive lower-order moment based (of the stochastic gradient) method, we propose an extension namely, HAdam, which uses higher order moments of the stochastic gradient. Our analysis and experiments reveal that certain higher-order moments of the stochastic gradient are able to achieve better performance compared to the vanilla Adam algorithm. We also provide some analysis of HAdam related to odd and even moments to explain some intriguing and seemingly non-intuitive empirical results.

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arXiv2019

Semantic Adversarial Attacks: Parametric Transformations That Fool Deep Classifiers

Deep neural networks have been shown to exhibit an intriguing vulnerability to adversarial input images corrupted with imperceptible perturbations. However, the majority of adversarial attacks assume global, fine-grained control over the image pixel space. In this paper, we consider a different setting: what happens if the adversary could only alter specific attributes of the input image? These would generate inputs that might be perceptibly different, but still natural-looking and enough to fool a classifier. We propose a novel approach to generate such `semantic' adversarial examples by optimizing a particular adversarial loss over the range-space of a parametric conditional generative model. We demonstrate implementations of our attacks on binary classifiers trained on face images, and show that such natural-looking semantic adversarial examples exist. We evaluate the effectiveness of our attack on synthetic and real data, and present detailed comparisons with existing attack methods. We supplement our empirical results with theoretical bounds that demonstrate the existence of such parametric adversarial examples.

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arXiv2019

Learning to Cope with Adversarial Attacks

The security of Deep Reinforcement Learning (Deep RL) algorithms deployed in real life applications are of a primary concern. In particular, the robustness of RL agents in cyber-physical systems against adversarial attacks are especially vital since the cost of a malevolent intrusions can be extremely high. Studies have shown Deep Neural Networks (DNN), which forms the core decision-making unit in most modern RL algorithms, are easily subjected to adversarial attacks. Hence, it is imperative that RL agents deployed in real-life applications have the capability to detect and mitigate adversarial attacks in an online fashion. An example of such a framework is the Meta-Learned Advantage Hierarchy (MLAH) agent that utilizes a meta-learning framework to learn policies robustly online. Since the mechanism of this framework are still not fully explored, we conducted multiple experiments to better understand the framework's capabilities and limitations. Our results shows that the MLAH agent exhibits interesting coping behaviors when subjected to different adversarial attacks to maintain a nominal reward. Additionally, the framework exhibits a hierarchical coping capability, based on the adaptability of the Master policy and sub-policies themselves. From empirical results, we also observed that as the interval of adversarial attacks increase, the MLAH agent can maintain a higher distribution of rewards, though at the cost of higher instabilities.

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arXiv2019

Encoding Invariances in Deep Generative Models

Reliable training of generative adversarial networks (GANs) typically require massive datasets in order to model complicated distributions. However, in several applications, training samples obey invariances that are \textit{a priori} known; for example, in complex physics simulations, the training data obey universal laws encoded as well-defined mathematical equations. In this paper, we propose a new generative modeling approach, InvNet, that can efficiently model data spaces with known invariances. We devise an adversarial training algorithm to encode them into data distribution. We validate our framework in three experimental settings: generating images with fixed motifs; solving nonlinear partial differential equations (PDEs); and reconstructing two-phase microstructures with desired statistical properties. We complement our experiments with several theoretical results.

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arXiv2019

Driver Behavior Analysis Using Lane Departure Detection Under Challenging Conditions

In this paper, we present a novel model to detect lane regions and extract lane departure events (changes and incursions) from challenging, lower-resolution videos recorded with mobile cameras. Our algorithm used a Mask-RCNN based lane detection model as pre-processor. Recently, deep learning-based models provide state-of-the-art technology for object detection combined with segmentation. Among the several deep learning architectures, convolutional neural networks (CNNs) outperformed other machine learning models, especially for region proposal and object detection tasks. Recent development in object detection has been driven by the success of region proposal methods and region-based CNNs (R-CNNs). Our algorithm utilizes lane segmentation mask for detection and Fix-lag Kalman filter for tracking, rather than the usual approach of detecting lane lines from single video frames. The algorithm permits detection of driver lane departures into left or right lanes from continuous lane detections. Preliminary results show promise for robust detection of lane departure events. The overall sensitivity for lane departure events on our custom test dataset is 81.81%.

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arXiv2019

Multi-level 3D CNN for Learning Multi-scale Spatial Features

3D object recognition accuracy can be improved by learning the multi-scale spatial features from 3D spatial geometric representations of objects such as point clouds, 3D models, surfaces, and RGB-D data. Current deep learning approaches learn such features either using structured data representations (voxel grids and octrees) or from unstructured representations (graphs and point clouds). Learning features from such structured representations is limited by the restriction on resolution and tree depth while unstructured representations creates a challenge due to non-uniformity among data samples. In this paper, we propose an end-to-end multi-level learning approach on a multi-level voxel grid to overcome these drawbacks. To demonstrate the utility of the proposed multi-level learning, we use a multi-level voxel representation of 3D objects to perform object recognition. The multi-level voxel representation consists of a coarse voxel grid that contains volumetric information of the 3D object. In addition, each voxel in the coarse grid that contains a portion of the object boundary is subdivided into multiple fine-level voxel grids. The performance of our multi-level learning algorithm for object recognition is comparable to dense voxel representations while using significantly lower memory.

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arXiv2018

Interpretable deep learning for guided structure-property explorations in photovoltaics

The performance of an organic photovoltaic device is intricately connected to its active layer morphology. This connection between the active layer and device performance is very expensive to evaluate, either experimentally or computationally. Hence, designing morphologies to achieve higher performances is non-trivial and often intractable. To solve this, we first introduce a deep convolutional neural network (CNN) architecture that can serve as a fast and robust surrogate for the complex structure-property map. Several tests were performed to gain trust in this trained model. Then, we utilize this fast framework to perform robust microstructural design to enhance device performance.

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arXiv2018

Flow Shape Design for Microfluidic Devices Using Deep Reinforcement Learning

Microfluidic devices are utilized to control and direct flow behavior in a wide variety of applications, particularly in medical diagnostics. A particularly popular form of microfluidics -- called inertial microfluidic flow sculpting -- involves placing a sequence of pillars to controllably deform an initial flow field into a desired one. Inertial flow sculpting can be formally defined as an inverse problem, where one identifies a sequence of pillars (chosen, with replacement, from a finite set of pillars, each of which produce a specific transformation) whose composite transformation results in a user-defined desired transformation. Endemic to most such problems in engineering, inverse problems are usually quite computationally intractable, with most traditional approaches based on search and optimization strategies. In this paper, we pose this inverse problem as a Reinforcement Learning (RL) problem. We train a DoubleDQN agent to learn from this environment. The results suggest that learning is possible using a DoubleDQN model with the success frequency reaching 90% in 200,000 episodes and the rewards converging. While most of the results are obtained by fixing a particular target flow shape to simplify the learning problem, we later demonstrate how to transfer the learning of an agent based on one target shape to another, i.e. from one design to another and thus be useful for a generic design of a flow shape.

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