arXiv subjects

Stephan A. van Gils

Publications and source records attributed to Stephan A. van Gils.

5 recordsLinked to original sources

arXiv2023

Bifurcations of Neural Fields on the Sphere

A common model to study pattern formation in large groups of neurons is the neural field. We investigate a neural field with excitatory and inhibitory neurons, like Wilson and Cowan (1972), with transmission delays and gap junctions. We build on the work of Visser et al. (2017) by investigating pattern formation in these models on the sphere. Specifically, we investigate how different amounts of gap-junctions, modelled by a diffusion term, influence the behaviour of the neural field. We look in detail at the periodic orbits which are generated by Hopf bifurcation in the presence of spherical symmetry. For this end, we derive general formulas to compute the normal form coefficients of these bifurcations up to third order and predict the stability of the resulting branches, and formulate a novel numerical method to solve delay equations on the sphere.

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arXiv2021

Neural Field Models with Transmission Delays and Diffusion

A neural field models the large scale behaviour of large groups of neurons. We extend results of van Gils et al. [2013] and Dijkstra et al. [2015] by including a diffusion term into the neural field, which models direct, electrical connections. We extend known and prove new sun-star calculus results for delay equations to be able to include diffusion and explicitly characterise the essential spectrum. For a certain class of connectivity functions in the neural field model, we are able to compute its spectral properties and the first Lyapunov coefficient of a Hopf bifurcation. By examining a numerical example, we find that the addition of diffusion suppresses non-synchronised steady-states, while favouring synchronised oscillatory modes.

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arXiv2017

A Framework for Directional and Higher-Order Reconstruction in Photoacoustic Tomography

Photoacoustic tomography is a hybrid imaging technique that combines high optical tissue contrast with high ultrasound resolution. Direct reconstruction methods such as filtered backprojection, time reversal and least squares suffer from curved line artefacts and blurring, especially in case of limited angles or strong noise. In recent years, there has been great interest in regularised iterative methods. These methods employ prior knowledge on the image to provide higher quality reconstructions. However, easy comparisons between regularisers and their properties are limited, since many tomography implementations heavily rely on the specific regulariser chosen. To overcome this bottleneck, we present a modular reconstruction framework for photoacoustic tomography. It enables easy comparisons between regularisers with different properties, e.g. nonlinear, higher-order or directional. We solve the underlying minimisation problem with an efficient first-order primal-dual algorithm. Convergence rates are optimised by choosing an operator dependent preconditioning strategy. Our reconstruction methods are tested on challenging 2D synthetic and experimental data sets. They outperform direct reconstruction approaches for strong noise levels and limited angle measurements, offering immediate benefits in terms of acquisition time and quality. This work provides a basic platform for the investigation of future advanced regularisation methods in photoacoustic tomography.

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arXiv2017

Combining Contrast Invariant L1 Data Fidelities with Nonlinear Spectral Image Decomposition

This paper focuses on multi-scale approaches for variational methods and corresponding gradient flows. Recently, for convex regularization functionals such as total variation, new theory and algorithms for nonlinear eigenvalue problems via nonlinear spectral decompositions have been developed. Those methods open new directions for advanced image filtering. However, for an effective use in image segmentation and shape decomposition, a clear interpretation of the spectral response regarding size and intensity scales is needed but lacking in current approaches. In this context, $L^1$ data fidelities are particularly helpful due to their interesting multi-scale properties such as contrast invariance. Hence, the novelty of this work is the combination of $L^1$-based multi-scale methods with nonlinear spectral decompositions. We compare $L^1$ with $L^2$ scale-space methods in view of spectral image representation and decomposition. We show that the contrast invariant multi-scale behavior of $L^1-TV$ promotes sparsity in the spectral response providing more informative decompositions. We provide a numerical method and analyze synthetic and biomedical images at which decomposition leads to improved segmentation.

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arXiv2012

On Local Bifurcations in Neural Field Models with Transmission Delays

Neural field models with transmission delay may be cast as abstract delay differential equations (DDE). The theory of dual semigroups (also called sun-star calculus) provides a natural framework for the analysis of a broad class of delay equations, among which DDE. In particular, it may be used advantageously for the investigation of stability and bifurcation of steady states. After introducing the neural field model in its basic functional analytic setting and discussing its spectral properties, we elaborate extensively an example and derive a characteristic equation. Under certain conditions the associated equilibrium may destabilise in a Hopf bifurcation. Furthermore, two Hopf curves may intersect in a double Hopf point in a two-dimensional parameter space. We provide general formulas for the corresponding critical normal form coefficients, evaluate these numerically and interpret the results.

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