arXiv subjects

Stephen Wiggins

Publications and source records attributed to Stephen Wiggins.

At least 91 records · Page 5Linked to original sources

arXiv2013

Normal Form and Nekhoroshev stability for nearly-integrable Hamiltonian systems with unconditionally slow aperiodic time dependence

The aim of this paper is to extend the results of Giorgilli and Zehnder for aperiodic time dependent systems to a case of general nearly-integrable convex analytic Hamiltonians. The existence of a normal form and then a stability result are shown in the case of a slow aperiodic time dependence that, under some smallness conditions, is independent on the size of the perturbation.

math.DS↗

arXiv2013

Nonstatistical dynamics on potentials exhibiting reaction path bifurcations and valley-ridge inflection points

We study reaction dynamics on a model potential energy surface exhibiting post-transition state bifurcation in the vicinity of a valley ridge inflection point. We compute fractional yields of products reached after the VRI region is traversed, both with and without dissipation. It is found that apparently minor variations in the potential lead to significant changes in the reaction dynamics. Moreover, when dissipative effects are incorporated, the product ratio depends in a complicated and highly non-monotonic fashion on the dissipation parameter. Dynamics in the vicinity of the VRI point itself play essentially no role in determining the product ratio, except in the highly dissipative regime.

physics.chem-ph↗

arXiv2013

Multiple Transition States and Roaming in Ion-Molecule Reactions: a Phase Space Perspective

We provide a dynamical interpretation of the recently identified `roaming' mechanism for molecular dissociation reactions in terms of geometrical structures in phase space. These are NHIMs (Normally Hyperbolic Invariant Manifolds) and their stable/unstable manifolds that define transition states for ion-molecule association or dissociation reactions. The associated dividing surfaces rigorously define a roaming region of phase space, in which both reactive and nonreactive trajectories can be trapped for arbitrarily long times.

physics.chem-ph↗

arXiv2013

Lagrangian Descriptors: A Method for Revealing Phase Space Structures of General Time Dependent Dynamical Systems

In this paper we develop new techniques for revealing geometrical structures in phase space that are valid for aperiodically time dependent dynamical systems, which we refer to as Lagrangian descriptors. These quantities are based on the integration, for a finite time, along trajectories of an intrinsic bounded, positive geometrical and/or physical property of the trajectory itself. We discuss a general methodology for constructing Lagrangian descriptors, and we discuss a "heuristic argument" that explains why this method is successful for revealing geometrical structures in the phase space of a dynamical system. We support this argument by explicit calculations on a benchmark problem having a hyperbolic fixed point with stable and unstable manifolds that are known analytically. Several other benchmark examples are considered that allow us the assess the performance of Lagrangian descriptors in revealing invariant tori and regions of shear. Throughout the paper "side-by-side" comparisons of the performance of Lagrangian descriptors with both finite time Lyapunov exponents (FTLEs) and finite time averages of certain components of the vector field ("time averages") are carried out and discussed. In all cases Lagrangian descriptors are shown to be both more accurate and computationally efficient than these methods. We also perform computations for an explicitly three dimensional, aperiodically time-dependent vector field and an aperiodically time dependent vector field defined as a data set. Comparisons with FTLEs and time averages for these examples are also carried out, with similar conclusions as for the benchmark examples.

nlin.CD↗

arXiv2012

Isomerization dynamics of a buckled nanobeam

We analyze the dynamics of a model of a nanobeam under compression. The model is a two mode truncation of the Euler-Bernoulli beam equation subject to compressive stress. We consider parameter regimes where the first mode is unstable and the second mode can be either stable or unstable, and the remaining modes (neglected) are always stable. Material parameters used correspond to silicon. The two mode model Hamiltonian is the sum of a (diagonal) kinetic energy term and a potential energy term. The form of the potential energy function suggests an analogy with isomerisation reactions in chemistry. We therefore study the dynamics of the buckled beam using the conceptual framework established for the theory of isomerisation reactions. When the second mode is stable the potential energy surface has an index one saddle and when the second mode is unstable the potential energy surface has an index two saddle and two index one saddles. Symmetry of the system allows us to construct a phase space dividing surface between the two "isomers" (buckled states). The energy range is sufficiently wide that we can treat the effects of the index one and index two saddles in a unified fashion. We have computed reactive fluxes, mean gap times and reactant phase space volumes for three stress values at several different energies. In all cases the phase space volume swept out by isomerizing trajectories is considerably less than the reactant density of states, proving that the dynamics is highly nonergodic. The associated gap time distributions consist of one or more `pulses' of trajectories. Computation of the reactive flux correlation function shows no sign of a plateau region; rather, the flux exhibits oscillatory decay, indicating that, for the 2-mode model in the physical regime considered, a rate constant for isomerization does not exist.

math-ph↗

arXiv2011

Transport Induced by Mean-Eddy Interaction: I. Theory, and Relation to Lagrangian Lobe Dynamics

In this paper we develop a method for the estimation of {\bf T}ransport {\bf I}nduced by the {\bf M}ean-{\bf E}ddy interaction (TIME) in two-dimensional unsteady flows. The method is built on the dynamical systems approach and can be viewed as a hybrid combination of Lagrangian and Eulerian methods. The (Eulerian) boundaries across which we consider (Lagrangian) transport are kinematically defined by appropriately chosen streamlines of the mean flow. By evaluating the impact of the mean-eddy interaction on transport, the TIME method can be used as a diagnostic tool for transport processes that occur during a specified time interval along a specified boundary segment. We introduce two types of TIME functions: one that quantifies the accumulation of flow properties and another that measures the displacement of the transport geometry. The spatial geometry of transport is described by the so-called pseudo-lobes, and temporal evolution of transport by their dynamics. In the case where the TIME functions are evaluated along a separatrix, the pseudo-lobes have a relationship to the lobes of Lagrangian transport theory. In fact, one of the TIME functions is identical to the Melnikov function that is used to measure the distance, at leading order in a small parameter, between the two invariant manifolds that define the Lagrangian lobes. We contrast the similarities and differences between the TIME and Lagrangian lobe dynamics in detail. An application of the TIME method is carried out for inter-gyre transport in the wind-driven oceanic circulation model and a comparison with the Lagrangian transport theory is made.

physics.ao-ph↗

arXiv2011

Transport Induced by Mean-Eddy Interaction: II. Analysis of Transport Processes

We present a framework for the analysis of transport processes resulting from the mean-eddy interaction in a flow. The framework is based on the {\bf T}ransport {\bf I}nduced by the {\bf M}ean-{\bf E}ddy {\bf I}nteraction (TIME) method presented in a companion paper \cite{ide_wiggins_pd06a}. The TIME method estimates the (Lagrangian) transport across stationary (Eulerian) boundaries defined by chosen streamlines of the mean flow. Our framework proceeds after first carrying out a sequence of preparatory steps that link the flow dynamics to the transport processes. This includes the construction of the so-called "instantaneous flux" as the Hovmöller diagram. Transport processes are studied by linking the signals of the instantaneous flux field to the dynamical variability of the flow. This linkage also reveals how the variability of the flow contributes to the transport. The spatio-temporal analysis of the flux diagram can be used to assess the efficiency of the variability in transport processes. We apply the method to the double-gyre ocean circulation model in the situation where the Rossby-wave mode dominates the dynamic variability. The spatio-temporal analysis shows that the inter-gyre transport is controlled by the circulating eddy vortices in the fast eastward jet region, whereas the basin-scale Rossby waves have very little impact.

physics.ao-ph↗

arXiv2011

Index k saddles and dividing surfaces in phase space, with applications to isomerization dynamics

In this paper we continue our studies of the phase space geometry and dynamics associated with index k saddles (k > 1) of the potential energy surface. Using normal form theory, we give an explicit formula for a "dividing surface" in phase space, i.e. a co-dimension one surface (within the energy shell) through which all trajectories that "cross" the region of the index k saddle must pass. With a generic non-resonance assumption, the normal form provides k (approximate) integrals that describe the saddle dynamics in a neighborhood of the index k saddle. These integrals provide a symbolic description of all trajectories that pass through a neighborhood of the saddle. We give a parametrization of the dividing surface which is used as the basis for a numerical method to sample the dividing surface. Our techniques are applied to isomerization dynamics on a potential energy surface having 4 minima; two symmetry related pairs of minima are connected by low energy index one saddles, with the pairs themselves connected via higher energy index one saddles and an index two saddle at the origin. We compute and sample the dividing surface and show that our approach enables us to distinguish between concerted crossing ("hilltop crossing") isomerizing trajectories and those trajectories that are not concerted crossing (potentially sequentially isomerizing trajectories). We then consider the effect of additional "bath modes" on the dynamics, which is a four degree-of-freedom system. For this system we show that the normal form and dividing surface can be realized and sampled and that, using the approximate integrals of motion and our symbolic description of trajectories, we are able to choose initial conditions corresponding to concerted crossing isomerizing trajectories and (potentially) sequentially isomerizing trajectories.

cond-mat.stat-mech↗

arXiv2010

Phase space barriers and dividing surfaces in the absence of critical points of the potential energy

We consider the existence of invariant manifolds in phase space governing reaction dynamics in situations where there are no saddle points on the potential energy surface in the relevant regions of configuration space. We point out that such situations occur in a number of important classes of chemical reactions, and we illustrate this concretely by considering a model for transition state switching in an ion-molecule association reaction due to Chesnavich (J. Chem. Phys. {\bf 84}, 2615 (1986)). For this model we show that, in the region of configuration space relevant to the reaction, there are no saddle points on the potential energy surface, but that in phase space there is a normally hyperbolic invariant manifold (NHIM) bounding a dividing surface having the property that the reactive flux through this dividing surface is a minimum. We then describe two methods for finding NHIMs and their associated phase space structures in systems with more than two degrees-of-freedom. These methods do not rely on the existence of saddle points, or any other particular feature, of the potential energy surface.

physics.chem-ph↗

arXiv2010

The Flux-Flux Correlation Function for Anharmonic Barriers

The flux-flux correlation function formalism is a standard and widely used approach for the computation of reaction rates. In this paper we introduce a method to compute the classical and quantum flux-flux correlation functions for anharmonic barriers essentially analytically through the use of the classical and quantum normal forms. In the quantum case we show that the quantum normal form reduces the computation of the flux-flux correlation function to that of an effective one dimensional anharmonic barrier. The example of the computation of the quantum flux-flux correlation function for a fourth order anharmonic barrier is worked out in detail, and we present an analytical expression for the quantum mechanical microcanonical flux-flux correlation function. We then give a discussion of the short-time and harmonic limits.

physics.chem-ph↗

arXiv2010

Quantum Theory of Reactive Scattering in Phase Space

We review recent results on quantum reactive scattering from a phase space perspective. The approach uses classical and quantum versions of normal form theory and the perspective of dynamical systems theory. Over the past ten years the classical normal form theory has provided a method for realizing the phase space structures that are responsible for determining reactions in high dimensional Hamiltonian systems. This has led to the understanding that a new (to reaction dynamics) type of phase space structure, a {\em normally hyperbolic invariant manifold} (or, NHIM) is the "anchor" on which the phase space structures governing reaction dynamics are built. The quantum normal form theory provides a method for quantizing these phase space structures through the use of the Weyl quantization procedure. We show that this approach provides a solution of the time-independent Schrödinger equation leading to a (local) S-matrix in a neighborhood of the saddle point governing the reaction. It follows easily that the quantization of the directional flux through the dividing surface with the properties noted above is a flux operator that can be expressed in a "closed form". Moreover, from the local S-matrix we easily obtain an expression for the cumulative reactio probability (CRP). Significantly, the expression for the CRP can be evaluated without the need to compute classical trajectories. The quantization of the NHIM is shown to lead to the activated complex, and the lifetimes of quantum states initialized on the NHIM correspond to the Gamov-Siegert resonances. We apply these results to the collinear nitrogen exchange reaction and a three degree-of-freedom system corresponding to an Eckart barrier coupled to two Morse oscillators.

quant-ph↗

arXiv2010

Phase space structure and dynamics for the Hamiltonian isokinetic thermostat

We investigate the phase space structure and dynamics of a Hamiltonian isokinetic thermostat, for which ergodic thermostat trajectories at fixed (zero) energy generate a canonical distribution in configuration space. Model potentials studied consist of a single bistable mode plus transverse harmonic modes. Interpreting the bistable mode as a reaction (isomerization) coordinate, we establish connections with the theory of unimolecular reaction rates, in particular the formulation of isomerization rates in terms of gap times. The distribution of gap times (or associated lifetimes) for a microcanonical ensemble initiated on the dividing surface is of great dynamical significance; an exponential lifetime distribution is usually taken to be an indicator of `statistical' behavior. Moreover, comparison of the magnitude of the phase space volume swept out by reactive trajectories as they pass through the reactant region with the total phase space volume (classical density of states) for the reactant region provides a necessary condition for ergodic dynamics. We compute gap times, associated lifetime distributions, mean gap times, reactive fluxes, reactive volumes and total reactant phase space volumes for model systems with 3 degrees of freedom, at three different temperatures. At all three temperatures, the necessary condition for ergodicity is approximately satisfied. At high temperatures a non-exponential lifetime distribution is found, while at low temperatures the lifetime is more nearly exponential. The degree of exponentiality of the lifetime distribution is quantified by computing the information entropy deficit with respect to pure exponential decay. The efficacy of the Hamiltonian isokinetic thermostat is examined by computing coordinate distributions averaged over single long trajectories initiated on the dividing surface.

cond-mat.stat-mech↗

arXiv2010

A periodic orbit formula for quantum reactions through transition states

Transition State Theory forms the basis of computing reaction rates in chemical and other systems. Recently it has been shown how transition state theory can rigorously be realized in phase space using an explicit algorithm. The quantization has been demonstrated to lead to an efficient procedure to compute cumulative reaction probabilities and the associated Gamov-Siegert resonances. In this letter these results are used to express the cumulative reaction probability as an absolutely convergent sum over periodic orbits contained in the transition state.

nlin.CD↗

arXiv2009

Finite-time Lagrangian transport analysis: Stable and unstable manifolds of hyperbolic trajectories and finite-time Lyapunov exponents

We consider issues associated with the Lagrangian characterisation of flow structures arising in aperiodically time-dependent vector fields that are only known on a finite time interval. A major motivation for the consideration of this problem arises from the desire to study transport and mixing problems in geophysical flows where the flow is obtained from a numerical solution, on a finite space-time grid, of an appropriate partial differential equation model for the velocity field. Of particular interest is the characterisation, location, and evolution of "transport barriers" in the flow, i.e. material curves and surfaces. We argue that a general theory of Lagrangian transport has to account for the effects of transient flow phenomena which are not captured by the infinite-time notions of hyperbolicity even for flows defined for all time. Notions of finite-time hyperbolic trajectories, their finite time stable and unstable manifolds, as well as finite-time Lyapunov exponent (FTLE) fields and associated Lagrangian coherent structures have been the main tools for characterizing transport barriers in the time-aperiodic situation. In this paper we consider a variety of examples, some with explicit solutions, that illustrate, in a concrete manner, the issues and phenomena that arise in the setting of finite-time dynamical systems. Of particular significance for geophysical applications is the notion of "flow transition" which occurs when finite-time hyperbolicity is lost, or gained. The phenomena discovered and analysed in our examples point the way to a variety of directions for rigorous mathematical research in this rapidly developing, and important, new area of dynamical systems theory.

nlin.CD↗

arXiv2009

The Quantum Normal Form Approach to Reactive Scattering: The Cumulative Reaction Probability for Collinear Exchange Reactions

The quantum normal form approach to quantum transition state theory is used to compute the cumulative reaction probability for collinear exchange reactions. It is shown that for heavy atom systems like the nitrogen exchange reaction the quantum normal form approach gives excellent results and has major computational benefits over full reactive scattering approaches. For light atom systems like the hydrogen exchange reaction however the quantum normal approach is shown to give only poor results. This failure is attributed to the importance of tunnelling trajectories in light atom reactions that are not captured by the quantum normal form as indicated by the only very slow convergence of the quantum normal form for such systems.

physics.chem-ph↗

arXiv2009

Geometrical Models of the Phase Space Structures Governing Reaction Dynamics

Hamiltonian dynamical systems possessing equilibria of ${saddle} \times {centre} \times...\times {centre}$ stability type display \emph{reaction-type dynamics} for energies close to the energy of such equilibria; entrance and exit from certain regions of the phase space is only possible via narrow \emph{bottlenecks} created by the influence of the equilibrium points. In this paper we provide a thorough pedagogical description of the phase space structures that are responsible for controlling transport in these problems. Of central importance is the existence of a \emph{Normally Hyperbolic Invariant Manifold (NHIM)}, whose \emph{stable and unstable manifolds} have sufficient dimensionality to act as separatrices, partitioning energy surfaces into regions of qualitatively distinct behavior. This NHIM forms the natural (dynamical) equator of a (spherical) \emph{dividing surface} which locally divides an energy surface into two components (`reactants' and `products'), one on either side of the bottleneck. This dividing surface has all the desired properties sought for in \emph{transition state theory} where reaction rates are computed from the flux through a dividing surface. In fact, the dividing surface that we construct is crossed exactly once by reactive trajectories, and not crossed by nonreactive trajectories, and related to these properties, minimizes the flux upon variation of the dividing surface. We discuss three presentations of the energy surface and the phase space structures contained in it for 2-degree-of-freedom (DoF) systems in the threedimensional space $\R^3$, and two schematic models which capture many of the essential features of the dynamics for $n$-DoF systems. In addition, we elucidate the structure of the NHIM.

nlin.CD↗

arXiv2009

Phase space geometry and reaction dynamics near index two saddles

We study the phase space geometry associated with index 2 saddles of a potential energy surface and its influence on reaction dynamics for $n$ degree-of-freedom (DoF) Hamiltonian systems. For index 1 saddles of potential energy surfaces (the case of classical transition state theory), the existence of a normally hyperbolic invariant manifold (NHIM) of saddle stability type has been shown, where the NHIM serves as the "anchor" for the construction of dividing surfaces having the no-recrossing property and minimal flux. For the index 1 saddle case the stable and unstable manifolds of the NHIM are co-dimension one in the energy surface, and act as conduits for reacting trajectories in phase space. The situation for index 2 saddles is quite different. We show that NHIMs with their stable and unstable manifolds still exist, but that these manifolds by themselves lack sufficient dimension to act as barriers in the energy surface. Rather, there are different types of invariant manifolds, containing the NHIM and its stable and unstable manifolds, that act as co-dimension one barriers in the energy surface. These barriers divide the energy surface in the vicinity of the index 2 saddle into regions of qualitatively different trajectories exhibiting a wider variety of dynamical behavior than for the case of index 1 saddles. In particular, we can identify a class of trajectories, which we refer to as "roaming trajectories", which are not associated with reaction along the classical minimum energy path (MEP). We illustrate the significance of our analysis of the index 2 saddle for reaction dynamics with two examples.

nlin.CD↗

arXiv2009

Microcanonical rates, gap times, and phase space dividing surfaces

The general approach to classical unimolecular reaction rates due to Thiele is revisited in light of recent advances in the phase space formulation of transition state theory for multidimensional systems. We analyze in detail the gap time distribution and associated reactant lifetime distribution for the isomerization reaction HCN $\rightleftharpoons$ CNH. Both algebraic (power law) and exponential decay regimes have been identified. Statistical estimates of the isomerization rate are compared with the numerically determined decay rate. Examination of the decay properties of subsensembles of trajectories that exit the HCN well through either of 2 available symmetry related product channels shows that the complete trajectory ensemble effectively attains the full symmetry of the system phase space on a short timescale $t \lesssim 0.5$ ps, after which the product branching ratio is 1:1, the "statistical" value. At intermediate times, this statistical product ratio is accompanied by nonexponential (nonstatistical) decay. We point out close parallels between the dynamical behavior inferred from the gap time distribution for HCN and nonstatistical behavior recently identified in reactions of some organic molecules.

cond-mat.stat-mech↗