arXiv subjects

Stijn van der Ham

Publications and source records attributed to Stijn van der Ham.

5 recordsLinked to original sources

arXiv2026

Dynamic bidirectional coupling of membrane morphology and rod organization in flexible vesicles

The ordering of rod-like particles in soft, deformable containers emerges from the interplay of anisotropic interactions, geometric confinement, and boundary compliance. This competition couples internal particle organization to container morphology, producing behavior distinct from both rigid confinement and bulk systems. Such coupling is also relevant to biological contexts in which filamentous structures are confined by deformable membranes. Using a minimal model combining experiments and simulations of colloidal rods encapsulated in lipid vesicles, we show that soft confinement drives a bidirectional coupling between internal order and vesicle shape. This interplay gives rise to a phase diagram in which elongated vesicles promote nematic alignment at lower packing fractions, whereas higher packing fractions induce smectic-like ordering that reshapes vesicles into plate-like morphologies with increased bending energy. Furthermore, by controlling vesicle volume and membrane area, we demonstrate that boundary conditions enable reversible tuning of both vesicle shape and internal rod organization. These results establish a framework for dynamically controlling colloidal self-assembly in soft containers and provide insight into the organization of anisotropic building blocks in deformable, cell-like, confinements.

cond-mat.soft↗

arXiv2026

Programmable Persistent Random Walks in Active Brownian Particles Govern Emergent Dynamics

Self-propelled particles serve as minimal models for emulating the dynamic self-organization of microorganisms, yet most synthetic systems remain limited to a single mode of motion, namely active Brownian particles (ABPs). Here, we present an experimental strategy to encode various persistent random walks in ABPs by combining light-modulated propulsion strength with magnetic control of propulsion direction. Our system enables programmable Levy walks with tunable step-length distributions, run-and-tumble dynamics, self-avoiding random walks, and Gaussian walks, with on-demand switching between motion modes within a single experiment. In addition, particles are steered along complex trajectories such as Fibonacci spirals and nested polygons. Beyond single-particle behavior, we show that propulsion modes influence clustering dynamics by comparing ABPs with chiral active particles undergoing circular motion. These results establish a versatile platform for investigating how encoded motion at the level of individual particles governs transport, search strategies, and emergent organization in active matter systems.

cond-mat.soft↗

arXiv2025

From shallow to full wrapping: geometry and deformability dictate lipid vesicle internalization

The deformability of vesicles critically influences their engulfment by lipid membranes, a process central to endocytosis, viral entry, drug delivery, and intercellular transport. While theoretical models have long predicted this influence, direct experimental validation has remained elusive. Here, we combine experiments with continuum simulations to quantify how vesicle deformability affects the engulfment of small giant unilamellar vesicles (GUVs) by larger GUVs under depletion-induced adhesion. Using 3D confocal reconstructions, we extract vesicle shape, curvature, wrapping fraction, and the bendo-capillary length, a characteristic length scale that balances membrane bending and adhesion forces. We find that when vesicle size exceeds this length scale, engulfment is primarily governed by geometry. In contrast, when vesicle size is comparable to this scale, deformability strongly affects the transition between shallow, deep, and fully wrapped states, leading to suppression of full engulfment of vesicles. These findings connect theoretical predictions with direct measurements and offer a unified framework for understanding vesicle-mediated uptake across both synthetic and biological systems, including viral entry, synthetic cell design, drug delivery, and nanoparticle internalization.

cond-mat.soft↗

arXiv2023

Role of shape in particle-lipid membrane interactions: from surfing to full engulfment

Understanding and manipulating the interactions between foreign bodies and cell membranes during endo- and phagocytosis is of paramount importance, not only for the fate of living cells but also for numerous biomedical applications. This study aims to elucidate the role of variables such as anisotropic particle shape, curvature, orientation, membrane tension, and adhesive strength in this essential process, using a minimal experimental biomimetic system comprising giant unilamellar vesicles and rod-like particles with different curvatures and aspect ratios. We find that the particle wrapping process is dictated by the balance between the elastic energy penalty and adhesion energy gain, leading to two distinct engulfment pathways, tip-first and side-first, emphasizing the significance of the particle orientation in determining the pathway. Moreover, our experimental results are consistent with theoretical predictions in a state diagram, showcasing how to control the wrapping pathway from surfing to partial to complete wrapping by the interplay between membrane tension and adhesive strength. At moderate particle concentrations, we observed the formation of rod clusters, which exhibited cooperative and sequential wrapping. Our study not only contributes to a comprehensive understanding of the mechanistic intricacies of endocytosis by highlighting how the interplay between the anisotropic particle shape, curvature, orientation, membrane tension, and adhesive strength can influence the engulfment pathway but also provides a foundational base for future research in the field.

cond-mat.soft↗

arXiv2023

A colloidal viewpoint on the finite sphere packing problem: the sausage catastrophe

It is commonly believed that the most efficient way to pack a finite number of equal-sized spheres is by arranging them tightly in a cluster. However, mathematicians have conjectured that a linear arrangement may actually result in the densest packing. Here, our combined experimental and simulation study provides a realization of the finite sphere packing problem by studying non-close-packed arrangements of colloids in a flaccid lipid vesicle. We map out a state diagram displaying linear, planar and cluster conformations of spheres, as well as bistable states which alternate between cluster-plate and plate-linear conformations due to membrane fluctuations. Finally, by systematically analyzing truncated polyhedral packings, we identify clusters of $56\leq N \leq 70$ spheres, excluding $N=57$ and 63, that pack more efficiently than linear arrangements.

cond-mat.soft↗