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Sumesh P. Thampi

Publications and source records attributed to Sumesh P. Thampi.

At least 19 recordsLinked to original sources

Active flows drive anchoring of nematics at rigid walls

Although confinement strongly influences flows in active materials, it remains unclear how active particles align at rigid boundaries when no thermodynamic anchoring is imposed. We address this question using continuum simulations of active nematics, together with analytical arguments based on a reduced near-wall description. In the flow-tumbling regime, extensile systems align parallel to the boundary, whereas contractile systems align perpendicular to it, consistent with active anchoring observed at active-passive interfaces. In the flow-aligning regime, the preferred orientation depends on the sign of activity and of the flow aligning parameter: either the shear-like flow generated near the wall selects the Leslie angle, or no unique alignment is established. These results provide a unified framework for activity-induced anchoring at rigid walls, demonstrating that boundary alignment in dense active matter can emerge solely from the interplay between self-generated flows and orientational dynamics.

cond-mat.soft

Radiation Forces and Torques on Janus Cylinders

We investigate radiation-induced drag, lift, and torque on circular Janus cylinders under transverse-magnetic plane-wave illumination, considering metallo-dielectric and purely dielectric configurations. The lattice Boltzmann method (LBM) is employed with absorption neglected, isolating scattering as the sole momentum-transfer mechanism. For metallo-dielectric Janus cylinders, analytical expressions for radiation force and torque are derived and used to validate the LBM, showing excellent agreement across a wide range of dielectric constants and interface orientations. For dielectric Janus cylinders, material inhomogeneity induces asymmetric scattering giving rise to nonzero lift and torque under plane-wave illumination, with non-monotonic dependence on interface orientation and dielectric contrast. Two mechanisms govern the observed variations: resonance-driven energy amplification and scattered field redistribution. The computed force and torque maps serve as design diagrams for predicting the optomechanical response. Coupling these with viscous dynamics at low Reynolds number reveals diverse particle trajectories, including curved paths during reorientation and nearly straight motion once torque-free equilibria are reached. The system is externally actuated and results represent scattering-dominated dynamics under idealized conditions, providing physical insight into optomechanical responses of Janus particles with implications for trajectory shaping in optofluidic systems.

cond-mat.soft

Hydrodynamic capture and release of a microswimmer by a meniscus corner

Biological microswimmers alter their motility in complex corner geometries, facilitating their survival. However, the dynamical features of low-Reynolds-number swimming at corners remain undefined. Here, we use active droplet microswimmers near a confined meniscus in a microchannel as a model system to study how microswimmer-corner interactions determine swimming patterns. Combining experiments, theory and simulations, we show that pusher-type micrsowimmers are attracted towards a meniscus corner, followed by transient trapping and eventual escape. We demonstrate that hydrodynamic interactions with the wall-interface corner intimately dictate the attraction and trapping or escape of the microswimmer on the basis of its strength. We show that the swimming trajectory at the meniscus corner can be tuned depending on the type of the microswimmer, the corner geometry and the viscosity ratio for the liquid interface. Our study provides a simple way to manipulate microswimmers by exploiting their hydrodynamic interactions near corner geometries.

cond-mat.soft

Lattice Boltzmann Method for Electromagnetic Wave Scattering

In this work, the lattice Boltzmann method (LBM) is assessed as a time-domain numerical approach for electromagnetic wave scattering. Owing to its explicit formulation and suitability for parallel computation on structured grids, LBM provides an alternative framework for solving Maxwell's equations. The formulation is first validated using canonical benchmarks, including reflection and refraction at a planar dielectric interface and two-dimensional scattering from infinitely long circular cylinders, where the computed angular scattering intensities are compared with analytical Lorenz-Mie solutions. Additional comparisons are performed for circular cylinders with varying dielectric constants to examine performance across different material contrasts. The framework is then extended to three-dimensional scattering from dielectric spheres, representing the most computationally demanding case considered in this work, and the resulting angular scattering intensities are compared with exact Lorenz-Mie solutions. To further examine performance for non-circular geometries, scattering from an infinitely long hexagonal dielectric cylinder is investigated and benchmarked against results obtained using the Discretized-Mie Formalism. Across all cases, the LBM predictions show close agreement with analytical and semi-analytical reference solutions over a range of size-to-wavelength ratios.

physics.optics

Shape, confinement and inertia effects on the dynamics of a driven spheroid in a viscous fluid

The dynamics of anisotropic particles in viscous flows underpin a wide range of processes in soft matter, microfluidics, and targeted drug delivery. Here, we investigate the motion of externally driven prolate and oblate spheroids suspended in a Newtonian fluid and confined within a square microchannel. Using lattice Boltzmann simulations, complemented by far-field hydrodynamic theory based on superposition of wall interactions, we systematically quantify how particle aspect ratio, strength of confinement, and fluid inertia influence the dynamics of a spheroid. For unconfined spheroids, we show that the translational velocity is maximized not for a sphere but for a prolate (end-on) or oblate (broadside-on) spheroid of a specific aspect ratio. Under confinement, the optimal aspect ratio shifts toward oblate shapes due to the dominant contribution of wall-induced frictional resistance. Off-center positioning introduces strong translation-rotation coupling, giving rise to two families of oscillatory trajectories - glancing and reversing - whose existence and structure are captured as closed orbits in phase space. Weak fluid inertia breaks these closed loops: glancing trajectories spiral outward and merge with reversing trajectories, and new stable fixed points emerge. Together, these results reveal how modest deviations from sphericity or creeping-flow conditions profoundly alter the dynamics of driven particles in confined geometries. The predictions offer guidelines for optimizing particle shape in microfluidic transport and highlight the rich nonlinear behavior accessible in confined suspensions of nonspherical colloids.

cond-mat.soft

Bridging Elastic and Active Turbulence

Remarkably, even under negligible inertia, the addition of microstructural agents can generate chaotic flow fields. Such behavior can arise in polymer solutions, leading to elastic turbulence, or from active, self-driven particles, which generate active turbulence. Here, we demonstrate a close and hitherto unrecognized connection between these two classes of turbulence. Specifically, we reveal that their continuum descriptions are analogous at the macroscopic level, such that polymeric fluids can be interpreted as a deformable analogue of contractile active matter. Moreover, our numerical results for Kolmogorov flow demonstrate that the transition into the well-known traveling arrowhead structures in elastic turbulence is marked by the emergence of $\pm 1/2$ topological defects, long recognized as a defining feature of active turbulence, in the polymer director field. Importantly, these coherent structures originate from a transverse instability driven by activity-like gradients generated by anisotropically stretched, contractile polymers. At sufficiently strong activity, the system undergoes a transition into a flow-suppressed state characterized by weak polymer stretching and ordering, a behavior that can be explained by analogy with the spontaneous-flow transition observed in channel-confined active nematics.

physics.flu-dyn

Low-Pass Filtering of Active Turbulent Flows to Liquid Substrates

To study the impact of active systems on their surroundings, we introduce a model that couples an active nematic fluid to an isotropic substrate fluid via friction. We numerically show that as the active layer develops turbulence, the substrate inherits the chaotic behaviour, exhibiting a novel form of turbulence driven by locally generated stochastic forcing from the active layer. In particular, the short-length-scale flow structures in the active layer are filtered out, so the system behaves as a de facto low-pass filter. We derive analytically the transfer function between the two layers and use it to predict the large-q decay of the substrate energy spectrum, and to investigate how tensorial quantities, such as the strain rate and the active stresses, are transmitted between the active layer and the substrate. Our analysis agrees with recent experiments measuring velocity-velocity correlations in mixtures of active and passive microtubules, and it may have implications for traction force microscopy measurements in cellular layers.

cond-mat.soft

Why Extensile and Contractile Tissues Could be Hard to Tell Apart

Active nematic models explain the topological defects and flow patterns observed in epithelial tissues, but the nature of active stress-whether it is extensile or contractile, a key parameter of the theory-is not well established experimentally. Individual cells are contractile, yet tissue-level behavior often resembles extensile nematics. To address this discrepancy, we use a continuum theory with two-tensor order parameters that distinguishes cell shape from active stress. We show that correlating cell shape and flow, whether in coherent flows in channels, near topological defects, or at rigid boundaries, cannot unambiguously determine the type of active stress. Our results demonstrate that simultaneous measurements of stress and cell shape are essential to fully interpret experiments investigating the nature of the physical forces acting within epithelial cell layers.

cond-mat.soft

Channel flows of deformable nematics

We describe channel flows in a continuum model of deformable nematic particles. In a simple shear flow, deformability leads to a nonlinear coupling of strain rate and vorticity, and results in shape oscillations or flow alignment. The final steady state can depend on initial conditions, and we explain this behaviour by considering a phase space representation of the dynamics. In Poiseuille flow, particle deformability and nematic elasticity induce banding, where particles near the walls are aligned, and those near the centre of the channel oscillate in direction and shape. Our results show that particle deformability can lead to complex behaviour even in simple flows, suggesting new microfluidic experiments.

cond-mat.soft

Nematic order from phase synchronization of shape oscillations

We show that a suspension of non-interacting deformable particles subjected to an oscillatory shear flow leads to development of nematic order that arises from the phenomenon of phase synchronization. The synchronized state corresponds to a unique, stable limit cycle confined in the toroidal state space. The limit cycle exists since, unlike rigid particles, deformable particles can modulate aspect ratio, adjust their tumbling rate and thus, achieve phase synchronization. These synchronized regions emerge as Arnold tongues in the parameter-space of the driving amplitude and frequency. Considering the rheological implications of ordering dynamics in soft and active matter, our results motivate oscillatory shear flow experiments with deformable particles.

cond-mat.soft

Viscoelastic Effects on the Hydrodynamics of an Active Compound Particle

Understanding the hydrodynamics of microswimmers in viscoelastic fluids and confined environments is crucial for interpreting their behaviour in natural settings and designing synthetic microswimmers for practical applications like cargo transport. In this study, we explore the hydrodynamics of a concentric active compound particle - a model microswimmer (a squirmer) positioned at the centre of a viscoelastic fluid droplet (a model cargo) suspended in another viscoelastic medium. We consider the Oldroyd-B constitutive model to characterize the fluids and employ a perturbative approach in the Deborah number to analyze viscoelastic effects analytically, assuming a small Capillary number so that the droplet remains spherical and does not deform. We examine three cases: (i) a squirmer confined within a viscoelastic fluid droplet suspended in a Newtonian fluid, (ii) a squirmer confined within a Newtonian fluid droplet suspended in a viscoelastic fluid, and (iii) a squirmer confined within a viscoelastic fluid droplet suspended in another viscoelastic fluid. Our findings reveal that the swimming speeds of the squirmer and the droplet are determined by the complex interplay of viscoelasticity, the size ratio of the droplet to the squirmer (confinement strength), and the viscosity ratio of the surrounding fluid to the droplet fluid. A critical aspect of this interaction is the positioning of stagnation points within the fluid flow, which governs the distribution of polymeric stress. This distribution, in turn, plays a crucial role in determining the influence of viscoelasticity on the squirmer's dynamics. Our analysis suggests that viscoelastic effects can either enhance or hinder the swimming speed of the squirmer when confined in a droplet, depending on the specific configuration of the system.

physics.flu-dyn

Active nematics in corrugated channels

Active nematic fluids exhibit complex dynamics in both bulk and in simple confining geometries. However, complex confining geometries could have substantial impact on active spontaneous flows. Using multiparticle collision dynamics simulations adapted for active nematic particles, we study the dynamic behaviour of an active nematic fluid confined in a corrugated channel. The transition from a quiescent state to a spontaneous flow state occurs from a weak swirling flow to a strong coherent flow due to the presence of curved-wall induced active flows. We show that active nematic fluid flows in corrugated channels can be understood in two different ways: (i) as the result of an early or delayed flow transition when compared with that in a flat-walled channel of appropriate width and (ii) boundary-induced active flows in the corrugations providing an effective slip velocity to the coherent flows in the bulk. Thus, our work illustrates the crucial role of corrugations of the confining boundary in dictating the flow transition and flow states of active fluids.

cond-mat.soft

Transport of topological defects in a biphasic mixture of active and passive nematic fluids

Collectively moving cellular systems often contain a proportion of dead cells or non-motile genotypes. When mixed, nematically aligning motile and non-motile agents are known to segregate spontaneously. However, the role that topological defects and active stresses play in shaping the distribution of the two phases remains unresolved. In this study, we investigate the behaviour of a two-dimensional binary mixture of active and passive nematic fluids to understand how topological defects are transported between the two phases and, ultimately, how this leads to the segregation of topological charges. When the activity of the motile phase is large, and the tension at the interface of motile and non-motile phases is weak, we find that the active phase tends to accumulate $+1/2$ defects and expel $-1/2$ defects so that the motile phase develops a net positive charge. Conversely, when the activity of the motile phase is comparatively small and interfacial tension is strong, the opposite occurs so that the active phase develops a net negative charge. We then use these simulations to develop a physical intuition of the underlying processes that drive the charge segregation. Lastly, we quantify the sensitivity of this process on the other model parameters, by exploring the effect that anchoring strength, orientational elasticity, friction, and volume fraction of the motile phase have on topological charge segregation. As $+1/2$ and $-1/2$ defects have very different effects on interface morphology and fluid transport, this study offers new insights into the spontaneous pattern formation that occurs when motile and non-motile cells interact.

physics.bio-ph

Viscoelastic confinement induces periodic flow reversals in active nematics

We use linear stability analysis and hybrid lattice Boltzmann simulations to study the dynamical behaviour of an active nematic confined in a channel made of viscoelastic material. We find that the quiescent, ordered active nematic is unstable above a critical activity. The transition is to a steady flow state for high elasticity of the channel surroundings. However, below a threshold elastic modulus, the system produces spontaneous oscillations with periodic flow reversals. We provide a phase diagram that highlights the region where time-periodic oscillations are observed and explain how they are produced by the interplay of activity and viscoelasticity. Our results suggest new experiments to study the role of viscoelastic confinement in the spatio-temporal organization and control of active matter.

cond-mat.soft

Planar Rotational Equilibria of Two Non-identical Microswimmers

We study a planar motion of two hydrodynamically coupled non-identical micro-swimmers, each modelled as a force dipole with intrinsic self-propulsion. Using the method of images, we demonstrate that our results remain equally applicable at a stress-free liquid-gas interface as in the bulk of a fluid. A closed analytical form of circular periodic orbits for a pair of two pullers and a pair of two pushers is presented and their linear stability is determined with respect to two- and three-dimensional perturbations. A universal stability diagram of the orbits with respect to two-dimensional perturbations is constructed and it is shown that two non-identical pushers or two non-identical pullers moving at a stress-free interface may form a stable rotational equilibrium. For two non-identical pullers, we find stable quasi-periodic localized states, associated with the motion on a two-dimensional torus in the phase space. Stable tori are born from circular periodic orbits as the result of a torus bifurcation. All stable equilibria in two dimensions are shown to be monotonically unstable with respect to three-dimensional perturbations.

nlin.CD

Wall curvature driven dynamics of a microswimmer

Microorganisms navigate through fluid, often confined by complex environments, to survive and sustain life. Inspired by this fact, we consider a model system and seek to understand the wall curvature driven dynamics of a squirmer, a mathematical model for a microswimmer, using (i) lattice Boltzmann simulations and (ii) analytical theory by \citet{dario_gareth}. The instantaneous dynamics of the system is presented in terms of fluid velocity fields, and the translational and angular velocities of the microswimmer, whereas the long time dynamics is presented by plotting the squirmer trajectories near curved boundaries in physical and dynamical space, as well as characterising them in terms of (i) proximity parameter, (ii) retention time, (iii) swimmer orientation and (iv) tangential velocity near the boundary, and (v) scattering angle during the collision. Our detailed analysis shows that irrespective of the type and strength, microswimmers exhibit a greater affinity towards a concave boundary due to hydrodynamic interactions compared to a convex boundary. In the presence of additional repulsive interactions with the boundary, we find that pullers (propel by forward thrust) have a slightly greater affinity towards the convex--curved walls compared to pushers (propel by backward thrust). Our study provides a comprehensive understanding of the consequence of hydrodynamic interactions in a unified framework that encompasses the dynamics of pullers, pushers, and neutral swimmers in the neighbourhood of flat, concave, and convex walls. In addition, the combined effect of oppositely curved surfaces is studied by confining the squirmer in an annulus. The results presented in a unified framework and insights obtained are expected to be useful to design geometrical confinements to control and guide the motion of microswimmers in microfluidic applications.

cond-mat.soft

Dilute dispersion of compound particles: deformation dynamics and rheology

Compound particles are a class of composite systems in which solid particles encapsulated in a fluid droplet are suspended in another fluid. They are encountered in various natural and biological processes, for e.g., nucleated cells, hydrogels, microcapsules etc. In this work, we analyze the flow in and around a concentric compound particle and investigate the deformation and reorientation dynamics of the confining drop and its stability against breakup in imposed linear flows. We obtain analytical expressions for the flow fields upto O(Ca) (capillary number) and the deformed shape of the confining drop upto O(Ca^2) using a domain perturbation technique. Further, we develop an O(Ca) constitutive equation for the volume-averaged stress for a dilute dispersion of compound particles. Compared to linear theory, O(Ca^2) calculations are found to be important as they make qualitatively different predictions in some linear flows. We find that the strong hydrodynamic interaction between the encapsulated particle and the confining interface results in an increased deformation of the confining drop compared to that of a simple drop, and enhances the rheological quantities such as the effective shear viscosity, extensional viscosity, and normal stress differences in a dilute dispersion. These measures pertaining to particles, drops, and particles coated with a fluid film are also derived as limiting cases of compound particles. Moreover, linear viscoelastic behavior of a dilute dispersion of compound particles is characterized in terms of complex modulus by subjecting the dispersion to a small amplitude oscillatory shear flow.

cond-mat.soft

Flow states and transitions of an active nematic in a three dimensional channel

We use active nematohydrodynamics to study the flow of an active fluid in a 3D microchannel, finding a transition between active turbulence and regimes where there is a net flow along the channel. We show that the net flow is only possible if the active nematic is flow aligning and that - in agreement with experiments - the appearance of the net flow depends on the aspect ratio of the channel cross-section. We explain our results in terms of the when hydrodynamic screening due to the channel walls allows the emergence of vortex rolls across the channel.

cond-mat.soft