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Takashi Arai

Publications and source records attributed to Takashi Arai.

14 recordsLinked to original sources

Identifiable factor analysis for mixed continuous and binary variables based on the Gaussian-Grassmann distribution

We develop a factor analysis for mixed continuous and binary observed variables. To this end, we utilized a recently developed multivariate probability distribution for mixed-type random variables, the Gaussian-Grassmann distribution. In the proposed factor analysis, marginalization over latent variables can be performed analytically, yielding an analytical expression for the distribution of the observed variables. This analytical tractability allows model parameters to be estimated using standard gradient-based optimization techniques. We also address improper solutions associated with maximum likelihood factor analysis. We propose a prescription to avoid improper solutions by imposing a constraint that row vectors of the factor loading matrix have the same norm for all features. Then, we prove that the proposed factor analysis is identifiable under the norm constraint. We demonstrate the validity of this norm constraint prescription and numerically verified the model's identifiability using both real and synthetic datasets. We also compare the proposed model with quantification method and found that the proposed model achieves better reproducibility of correlations than the quantification method.

stat.ME

Identifiability and improper solutions in the probabilistic partial least squares regression with unique variance

This paper addresses theoretical issues associated with probabilistic partial least squares (PLS) regression. As in the case of factor analysis, the probabilistic PLS regression with unique variance suffers from the issues of improper solutions and lack of identifiability, both of which causes difficulties in interpreting latent variables and model parameters. Using the fact that the probabilistic PLS regression can be viewed as a special case of factor analysis, we apply a norm constraint prescription on the factor loading matrix in the probabilistic PLS regression, which was recently proposed in the context of factor analysis to avoid improper solutions. Then, we prove that the probabilistic PLS regression with this norm constraint is identifiable. We apply the probabilistic PLS regression to data on amino acid mutations in Human Immunodeficiency Virus (HIV) protease to demonstrate the validity of the norm constraint and to confirm the identifiability numerically. Utilizing the proposed constraint enables the visualization of latent variables via a biplot. We also investigate the sampling distribution of the maximum likelihood estimates (MLE) using synthetically generated data. We numerically observe that MLE is consistent and asymptotically normally distributed.

stat.ME

Multivariate binary probability distribution in the Grassmann formalism

We propose a probability distribution for multivariate binary random variables. The probability distribution is expressed as principal minors of the parameter matrix, which is a matrix analogous to the inverse covariance matrix in the multivariate Gaussian distribution. In our model, the partition function, central moments, and the marginal and conditional distributions are expressed analytically. That is, summation over all possible states is not necessary for obtaining the partition function and various expected values, which is a problem with the conventional multivariate Bernoulli distribution. The proposed model has many similarities to the multivariate Gaussian distribution. For example, the marginal and conditional distributions are expressed in terms of the parameter matrix and its inverse matrix, respectively. That is, the inverse matrix represents a sort of partial correlation. The proposed distribution can be derived using Grassmann numbers, anticommuting numbers. Analytical expressions for the marginal and conditional distributions are also useful in generating random numbers for multivariate binary variables. Hence, we investigated sampling distributions of parameter estimates using synthetic datasets. The computational complexity of maximum likelihood estimation from observed data is proportional to the number of unique observed states, not to the number of all possible states as is required in the case of the conventional multivariate Bernoulli distribution. We empirically observed that the sampling distributions of the maximum likelihood estimates appear to be consistent and asymptotically normal.

stat.ME

Multivariate probability distribution for categorical and ordinal random variables

We propose a multivariate probability distribution for categorical and ordinal random variables. To this end, we use the Grassmann distribution in conjunction with dummy encoding of categorical and ordinal variables. To realize the co-occurrence probabilities of dummy variables required for categorical and ordinal variables, we propose a parsimonious parameterization for the Grassmann distribution that ensures the positivity of probability distribution. As an application of the proposed distribution, we develop a factor analysis for categorical and ordinal variables and show the validity of the model using a real dataset.

stat.ME

Factor analysis for a mixture of continuous and binary random variables

We propose a multivariate probability distribution that models a linear correlation between binary and continuous variables. The proposed distribution is a natural extension of the previously developed multivariate binary distribution. As an application of the proposed distribution, we develop a factor analysis for a mixture of continuous and binary variables. We also discuss improper solutions associated with factor analysis. As a prescription to avoid improper solutions, we propose a constraint that each row vector of factor loading matrix has the same norm. We numerically validated the proposed factor analysis and norm constraint prescription by analyzing real datasets.

stat.ME

A new Granger causality measure for eliminating the confounding influence of latent common inputs

In this paper, we propose a new Granger causality measure which is robust against the confounding influence of latent common inputs. This measure is inspired by partial Granger causality in the literature, and its variant. Using numerical experiments we first show that the test statistics for detecting directed interactions between time series approximately obey the $F$-distributions when there are no interactions. Then, we propose a practical procedure for inferring directed interactions, which is based on the idea of multiple statistical test in situations where the confounding influence of latent common inputs may exist. The results of numerical experiments demonstrate that the proposed method successfully eliminates the influence of latent common inputs while the normal Granger causality method detects spurious interactions due to the influence of the confounder.

stat.ME

Compositeness of baryonic resonances: Applications to the Delta(1232), N(1535), and N(1650) resonances

We present a formulation of the compositeness for baryonic resonances in order to discuss the meson-baryon molecular structure inside the resonances. For this purpose, we derive a relation between the residue of the scattering amplitude at the resonance pole position and the two-body wave function of the resonance in a sophisticated way, and we define the compositeness as the norm of the two-body wave functions. As applications, we investigate the compositeness of the $Δ(1232)$, $N (1535)$, and $N (1650)$ resonances from precise $πN$ scattering amplitudes in a unitarized chiral framework with the interaction up to the next-to-leading order in chiral perturbation theory. The $πN$ compositeness for the $Δ(1232)$ resonance is evaluated in the $πN$ single-channel scattering, and we find that the $πN$ component inside $Δ(1232)$ in the present framework is nonnegligible, which supports the previous work. On the other hand, the compositeness for the $N (1535)$ and $N (1650)$ resonances is evaluated in a coupled-channels approach, resulting that the $πN$, $ηN$, $K Λ$ and $K Σ$ components are negligible for these resonances.

hep-ph

Compositeness of the Delta(1232) resonance in pi N scattering

We evaluate the $πN$ compositeness of the $Δ(1232)$ resonance so as to clarify the internal structure of $Δ(1232)$ in terms of the $πN$ component. Here the compositeness is defined as contributions from two-body wave functions to the normalization of the total wave function and is extracted from the $πN$ scattering amplitude. In this study we employ the chiral unitary approach with the interaction up to the next-to-leading order plus a bare $Δ$ term in chiral perturbation theory and describe $Δ(1232)$ in an elastic $πN$ scattering. Fitting the $πN$ scattering amplitude to the solution of the partial wave analysis, we obtain a large real part of the $πN$ compositeness for $Δ(1232)$ comparable to unity and non-negligible imaginary part as well, with which we reconfirm the result in the previous study on the $πN$ compositeness for $Δ(1232)$.

hep-ph

Path integral representation for stochastic jump processes with boundaries

We propose a formalism to analyze discrete stochastic processes with finite-state-level N. By using an (N+1)-dimensional representation of su(2) Lie algebra, we re-express the master equation to a time-evolution equation for the state vector corresponding to the probability generating function. We found that the generating function of the system can be expressed as a propagator in the spin coherent state representation. The generating function has a path integral representation in terms of the spin coherent state. We apply our formalism to a linear Susceptible-Infected-Susceptible (SIS) epidemic model with time-dependent transition probabilities. The probability generating function of the system is calculated concisely using an algebraic property of the system or a path integral representation. Our results indicate that the method of analysis developed in the field of quantum mechanics is applicable to discrete stochastic processes with finite-state-level.

cond-mat.stat-mech

Euler-Heisenberg-Weiss action for QCD+QED

We derive an analytic expression for one-loop effective action of QCD+QED at zero and finite temperatures by using the Schwinger's proper time method. The result is a nonlinear effective action not only for electromagnetic and chromo-electromagnetic fields but also the Polyakov loop, and thus reproduces the Euler-Heisenberg action in QED, QCD, and QED+QCD, and also the Weiss potential for the Polyakov loop at finite temperature. As applications of this "Euler-Heisenberg-Weiss" action in QCD+QED, we investigate quark pair productions induced by QCD+QED fields at zero temperature and the Polyakov loop in the presence of strong electromagnetic fields. Quark one-loop contribution to the effective potential of the Polyakov loop explicitly breaks the center symmetry, and is found to be enhanced by the magnetic field, which is consistent with the inverse magnetic catalysis observed in lattice QCD simulation.

hep-ph

Momentum spectra of particles produced in a single pulse of an electric field

We study particle creation in a single pulse of an electric field in scalar quantum electrodynamics. We first identify parameter regions of the theory where the dynamical pair creation and Schwinger mechanism respectively dominate each other. Then, analytical expressions for the total characteristics of particle creation are determined for the case where the Schwinger mechanism dominates. We also compare our results with those produced in a constant electric field with a finite-time interval. These results coincide at a strong field regime, however they differ in general field strength. We identify the reason of this difference with a nonperturbative effect of high-frequency photons in external electric fields.

hep-th

Effective potential and Goldstone bosons in de Sitter space

We investigate nonperturbative infrared effects for the O(N) linear sigma model in de Sitter space using the two-particle irreducible effective action at the Hartree truncation level. This approximation resums the infinite series of so-called superdaisy diagrams. For the proper treatment of ultraviolet divergences, we first study the renormalization of this approximation on a general curved background. Then, we calculate radiatively corrected masses and the effective potential. As a result, spontaneous symmetry breaking is possible, on the other hand, the Goldstone modes acquire a positive definite mass term due to the screening effects of interaction. Possible infrared divergence is self-regulated by the mass term. Furthermore, there is a symmetry restoring phase transition as a function of the Hubble parameter. In our approximation, the phase transition is of first order.

hep-th

Nonperturbative infrared effects for light scalar fields in de Sitter space

We study the phi^4 scalar field theory in de Sitter space using the 2PI effective action formalism. This formalism enables us to investigate the nonperturbative quantum effects. We use the mean field and gap equations and calculate the physical mass and effective potential. We find that nonperturbative infrared effects on de Sitter space produce a curvature-induced mass and work to restore the broken Z_2 symmetry.

hep-th

Renormalization of the 2PI Hartree-Fock approximation on de Sitter background in the broken phase

The infrared effects for light minimally coupled scalar fields with quartic self-interaction in de Sitter space is investigated using the 2PI effective action formalism. This formalism partially resums infinite series of loop diagrams, and enables us to circumvent the IR divergence problem for a massless minimally coupled scalar field in de Sitter space. It is anticipated that nonperturbative infrared effects generate a curvature-induced mass and self-regulate the IR divergence. However, due to its nonperturbative nature, the renormalization prescription is a nontrivial task. To calculate physical quantities, an appropriate renormalization prescription is required. In this paper, we will show that the MS-like scheme is possible at the Hartree-Fock truncation of the 2PI effective action, and infinite series of divergent terms are needed as counterterms. The phase structure and the quantum backreaction to Einstein's field equation are calculated.

hep-th