arXiv subjects

Takashi Ishio

Publications and source records attributed to Takashi Ishio.

At least 19 recordsLinked to original sources

arXiv2024

Does the First Response Matter for Future Contributions? A Study of First Contributions

Open Source Software (OSS) projects rely on a continuous stream of new contributors for their livelihood. Recent studies reported that new contributors experience many barriers in their first contribution, with the social barrier being critical. Although a number of studies investigated the social barriers to new contributors, we hypothesize that negative first responses may cause an unpleasant feeling, and subsequently lead to the discontinuity of any future contribution. We execute protocols of a registered report to analyze 2,765,917 first contributions as Pull Requests (PRs) with 642,841 first responses. We characterize most first response as being positive, but less responsive, and exhibiting sentiments of fear, joy and love. Results also indicate that negative first responses have the literal intention to arouse emotions of being either constructive (50.71%) or criticizing (37.68%) in nature. Running different machine learning models, we find that predicting future interactions is low (F1 score of 0.6171), but relatively better than baselines. Furthermore, an analysis of these models show that interactions are positively correlated with a future contribution, with other dimensions (i.e., project, contributor, contribution) having a large effect.

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arXiv2023

More Than React: Investigating The Role of Emoji Reaction in GitHub Pull Requests

Open source software development has become more social and collaborative, evident GitHub. Since 2016, GitHub started to support more informal methods such as emoji reactions, with the goal to reduce commenting noise when reviewing any code changes to a repository. From a code review context, the extent to which emoji reactions facilitate a more efficient review process is unknown. We conduct an empirical study to mine 1,850 active repositories across seven popular languages to analyze 365,811 Pull Requests (PRs) for their emoji reactions against the review time, first-time contributors, comment intentions, and the consistency of the sentiments. Answering these four research perspectives, we first find that the number of emoji reactions has a significant correlation with the review time. Second, our results show that a PR submitted by a first-time contributor is less likely to receive emoji reactions. Third, the results reveal that the comments with an intention of information giving, are more likely to receive an emoji reaction. Fourth, we observe that only a small proportion of sentiments are not consistent between comments and emoji reactions, i.e., with 11.8% of instances being identified. In these cases, the prevalent reason is when reviewers cheer up authors that admit to a mistake, i.e., acknowledge a mistake. Apart from reducing commenting noise, our work suggests that emoji reactions play a positive role in facilitating collaborative communication during the review process.

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arXiv2023

18 Million Links in Commit Messages: Purpose, Evolution, and Decay

Commit messages contain diverse and valuable types of knowledge in all aspects of software maintenance and evolution. Links are an example of such knowledge. Previous work on "9.6 million links in source code comments" showed that links are prone to decay, become outdated, and lack bidirectional traceability. We conducted a large-scale study of 18,201,165 links from commits in 23,110 GitHub repositories to investigate whether they suffer the same fate. Results show that referencing external resources is prevalent and that the most frequent domains other than github.com are the external domains of Stack Overflow and Google Code. Similarly, links serve as source code context to commit messages, with inaccessible links being frequent. Although repeatedly referencing links is rare (4%), 14% of links that are prone to evolve become unavailable over time; e.g., tutorials or articles and software homepages become unavailable over time. Furthermore, we find that 70% of the distinct links suffer from decay; the domains that occur the most frequently are related to Subversion repositories. We summarize that links in commits share the same fate as links in code, opening up avenues for future work.

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arXiv2022

An Empirical Study of Package Management Issues via Stack Overflow

The package manager (PM) is crucial to most technology stacks, acting as a broker to ensure that a verified dependency package is correctly installed, configured, or removed from an application. Diversity in technology stacks has led to dozens of PMs with various features. While our recent study indicates that package management features of PM are related to end-user experiences, it is unclear what those issues are and what information is required to resolve them. In this paper, we have investigated PM issues faced by end-users through an empirical study of content on Stack Overflow (SO). We carried out a qualitative analysis of 1,131 questions and their accepted answer posts for three popular PMs (i.e., Maven, npm, and NuGet) to identify issue types, underlying causes, and their resolutions. Our results confirm that end-users struggle with PM tool usage (approximately 64-72%). We observe that most issues are raised by end-users due to lack of instructions and errors messages from PM tools. In terms of issue resolution, we find that external link sharing is the most common practice to resolve PM issues. Additionally, we observe that links pointing to useful resources (i.e., official documentation websites, tutorials, etc.) are most frequently shared, indicating the potential for tool support and the ability to provide relevant information for PM end-users.

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arXiv2022

A Framework for Conditional Statement Technical Debt Identification and Description

Technical Debt occurs when development teams favour short-term operability over long-term stability. Since this places software maintainability at risk, technical debt requires early attention to avoid paying for accumulated interest. Most of the existing work focuses on detecting technical debt using code comments, known as Self-Admitted Technical Debt (SATD). However, there are many cases where technical debt instances are not explicitly acknowledged but deeply hidden in the code. In this paper, we propose a framework that caters for the absence of SATD comments in code. Our Self-Admitted Technical Debt Identification and Description (SATDID) framework determines if technical debt should be self-admitted for an input code fragment. If that is the case, SATDID will automatically generate the appropriate descriptive SATD comment that can be attached with the code. While our approach is applicable in principle to any type of code fragments, we focus in this study on technical debt hidden in conditional statements, one of the most TD-carrying parts of code. We explore and evaluate different implementations of SATDID. The evaluation results demonstrate the applicability and effectiveness of our framework over multiple benchmarks. Comparing with the results from the benchmarks, our approach provides at least 21.35%, 59.36%, 31.78%, and 583.33% improvements in terms of Precision, Recall, F-1, and Bleu-4 scores, respectively. In addition, we conduct human evaluation to the SATD comments generated by SATDID. In 1-5 and 0-5 scales for Acceptability and Understandability, the total means achieved by our approach are 3.128 and 3.172, respectively.

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arXiv2022

An Empirical Evaluation of Competitive Programming AI: A Case Study of AlphaCode

AlphaCode is a code generation system for assisting software developers in solving competitive programming problems using natural language problem descriptions. Despite the advantages of the code generating system, the open source community expressed concerns about practicality and data licensing. However, there is no research investigating generated codes in terms of code clone and performance. In this paper, we conduct an empirical study to find code similarities and performance differences between AlphaCode-generated codes and human codes. The results show that (i) the generated codes from AlphaCode are similar to human codes (i.e., the average maximum similarity score is 0.56) and (ii) the generated code performs on par with or worse than the human code in terms of execution time and memory usage. Moreover, AlphaCode tends to generate more similar codes to humans for low-difficulty problems (i.e., four cases have the exact same codes). It also employs excessive nested loops and unnecessary variable declarations for high-difficulty problems, which cause low performance regarding our manual investigation. The replication package is available at https:/doi.org/10.5281/zenodo.6820681

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arXiv2022

Bug-Fix Variants: Visualizing Unique Source Code Changes across GitHub Forks

Forking is a common practice for developers when building upon on already existing projects. These forks create variants, which have a common code base but then evolve the code in different directions, which is specific to that forked project requirements. An interesting side-effect of having multiple forks is the ability to select between different evolution directions of the code which is based on developers fixing bugs in the code base. However, the key issue that this decentralized form of information is difficult to analyze. In this study, we propose a visualization to analyze active changes in fork repositories that have not been merged back to the original project. Our visualization shows code commit activities in multiple forks with highlight on bug fix commits in the history of forks. While the commit activity of each repository is visualized similarly to the code frequency view of GitHub, our view shows only commits unique to fork repositories. To illustrate the effectiveness of our visualization, we have applied our view to two use cases: identifying forks from a repository no longer maintained, and identifying a bug fix among forks. In the first case, we identify a fork of a suspended project named Obfuscator-LLVM. Our view shows the original repository and its most active fork that continue the development on the top. In the second case, we identify a bug fix in a fork of Clipy project. Our view shows that the most active fork has its own bug fixes; we could easily identify a patch for the bug highlighted in the view. As a new ideas paper, we then present our outline of three research questions to spark real world use-cases and goals for our visualization has the potential to uncover. A prototype of our visualization is available at \textcolor{blue}{\url{https://naist-se.github.io/vissoft2022/}

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arXiv2022

Giving Back: Contributions Congruent to Library Dependency Changes in a Software Ecosystem

Popular adoption of third-party libraries for contemporary software development has led to the creation of large inter-dependency networks, where sustainability issues of a single library can have widespread network effects. Maintainers of these libraries are often overworked, relying on the contributions of volunteers to sustain these libraries. In this work, we measure contributions that are aligned with dependency changes, to understand where they come from (i.e., non-maintainer, client maintainer, library maintainer, and library and client maintainer), analyze whether they contribute to library dormancy (i.e., a lack of activity), and investigate the similarities between these contributions and developers' typical contributions. Hence, we leverage socio-technical techniques to measure the dependency-contribution congruence (DC congruence), i.e., the degree to which contributions align with dependencies. We conduct a large-scale empirical study to measure the DC congruence for the NPM ecosystem using 1.7 million issues, 970 thousand pull requests (PR), and over 5.3 million commits belonging to 107,242 NPM packages. At the ecosystem level, we pinpoint in time peaks of congruence with dependency changes (i.e., 16% DC congruence score). Surprisingly, these contributions came from the ecosystem itself (i.e., non-maintainers of either client and library). At the project level, we find that DC congruence shares a statistically significant relationship with the likelihood of a package becoming dormant. Finally, by comparing source code of contributions, we find that congruent contributions are statistically different to typical contributions. Our work has implications to encourage and sustain contributions, especially to support library maintainers that require dependency changes.

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arXiv2022

On the Use of Refactoring in Security Vulnerability Fixes: An Exploratory Study on Maven Libraries

Third-party library dependencies are commonplace in today's software development. With the growing threat of security vulnerabilities, applying security fixes in a timely manner is important to protect software systems. As such, the community developed a list of software and hardware weakness known as Common Weakness Enumeration (CWE) to assess vulnerabilities. Prior work has revealed that maintenance activities such as refactoring code potentially correlate with security-related aspects in the source code. In this work, we explore the relationship between refactoring and security by analyzing refactoring actions performed jointly with vulnerability fixes in practice. We conducted a case study to analyze 143 maven libraries in which 351 known vulnerabilities had been detected and fixed. Surprisingly, our exploratory results show that developers incorporate refactoring operations in their fixes, with 31.9% (112 out of 351) of the vulnerabilities paired with refactoring actions. We envision this short paper to open up potential new directions to motivate automated tool support, allowing developers to deliver fixes faster, while maintaining their code.

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arXiv2022

Software Supply Chain Map: How Reuse Networks Expand

Clone-and-own is a typical code reuse approach because of its simplicity and efficiency. Cloned software components are maintained independently by a new owner. These clone-and-own operations can be occurred sequentially, that is, cloned components can be cloned again and owned by other new owners on the supply chain. In general, code reuse is not documented well, consequently, appropriate changes like security patches cannot be propagated to descendant software projects. However, the OpenChain Project defined identifying and tracking source code reuses as responsibilities of FLOSS software staffs. Hence supporting source code reuse awareness is in a real need. This paper studies software reuse relations in FLOSS ecosystem. Technically, clone-and-own reuses of source code can be identified by file-level clone set detection. Since change histories are associated with files, we can determine origins and destinations in reusing across multiple software by considering times. By building software supply chain maps, we find that clone-and-own is prevalent in FLOSS development, and set of files are reused widely and repeatedly. These observations open up future challenges of maintaining and tracking global software genealogies.

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arXiv2022

Newcomer OSS-Candidates: Characterizing Contributions of Novice Developers to GitHub

The ability of an Open Source Software (OSS) project to attract, onboard, and retain any newcomer is vital to its livelihood. Although, evidence suggests an upsurge in novice developers joining social coding platforms (such as GitHub), the extent to which their activities result in a OSS contribution is unknown. Henceforth, we execute the protocols of a registered report to study activities of a "Newcomer OSS-Candidate", who is a novice developer that is new to that social coding platform, and has the intention to later onboard an OSS project. Using GitHub as a case platform, we analyze 171 identified Newcomer OSS-Candidates to characterize their contribution activities. Results show that Newcomer OSS-Candidates are likely to target software based repositories (i.e., 66%), and their first contributions are mainly associated with development (commits) and maintenance (PRs). Newcomer OSS-Candidates are less likely to practice social coding, but eventually end up onboarding (i.e., 30% quantitative, 70% follow-up survey) an OSS project. Furthermore, they cite finding a way to start as the most challenging barrier to contribute. Our work reveals insights on how newcomers to social coding platforms are potential sources of OSS contributions.

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arXiv2022

Does Coding in Pythonic Zen Peak Performance? Preliminary Experiments of Nine Pythonic Idioms at Scale

In the field of data science, and for academics in general, the Python programming language is a popular choice, mainly because of its libraries for storing, manipulating, and gaining insight from data. Evidence includes the versatile set of machine learning, data visualization, and manipulation packages used for the ever-growing size of available data. The Zen of Python is a set of guiding design principles that developers use to write acceptable and elegant Python code. Most principles revolve around simplicity. However, as the need to compute large amounts of data, performance has become a necessity for the Python programmer. The new idea in this paper is to confirm whether writing the Pythonic way peaks performance at scale. As a starting point, we conduct a set of preliminary experiments to evaluate nine Pythonic code examples by comparing the performance of both Pythonic and Non-Pythonic code snippets. Our results reveal that writing in Pythonic idioms may save memory and time. We show that incorporating list comprehension, generator expression, zip, and itertools.zip_longest idioms can save up to 7,000 MB and up to 32.25 seconds. The results open more questions on how they could be utilized in a real-world setting. The replication package includes all scripts, and the results are available at https://doi.org/10.5281/zenodo.5712349

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arXiv2022

An Exploration of npm Package Co-Usage Examples from Stack Overflow: A Case Study

Third-party package usage has become a common practice in contemporary software development. Developers often face different challenges, including choosing the right libraries, installing errors, discrepancies, setting up the environment, and building failures during software development. The risks of maintaining a third-party package are well known, but it is unclear how information from Stack Overflow (SO) can be useful. This paper performed an empirical study to explore npm co-usage in SO. From over 30,000 SO posts, we extracted 2,100 SO posts related to npm and matched them to 217,934 npm library packages. We find that, popular and highly used libraries are not discussed as often in SO. However, we can see that the accepted answers may prove useful, as we believe that the usage examples and executable commands could be reused for tool support.

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arXiv2021

Characterizing and Mitigating Self-Admitted Technical Debt in Build Systems

Technical Debt is a metaphor used to describe the situation in which long-term software artifact quality is traded for short-term goals in software projects. In recent years, the concept of self-admitted technical debt (SATD) was proposed, which focuses on debt that is intentionally introduced and described by developers. Although prior work has made important observations about admitted technical debt in source code, little is known about SATD in build systems. In this paper, we set out to better understand the characteristics of SATD in build systems. To do so, through a qualitative analysis of 500 SATD comments in the Maven build system of 291 projects, we characterize SATD by location and rationale (reason and purpose). Our results show that limitations in tools and libraries, and complexities of dependency management are the most frequent causes, accounting for 50% and 24% of the comments. We also find that developers often document SATD as issues to be fixed later. As a first step towards the automatic detection of SATD rationale, we train classifiers to detect the two most frequently occurring reasons and the four most frequently occurring purposes of SATD in the content of comments in Maven build systems. The classifier performance is promising, achieving an F1-score of 0.71-0.79. Finally, within 16 identified 'ready-to-be-addressed' SATD instances, the three SATD submitted by pull requests and the five SATD submitted by issue reports were resolved after developers were made aware. Our work presents the first step towards understanding technical debt in build systems and opens up avenues for future work, such as tool support to track and manage SATD backlogs.

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arXiv2021

SōjiTantei: Function-Call Reachability Detection of Vulnerable Code for npm Packages

It has become common practice for software projects to adopt third-party dependencies. Developers are encouraged to update any outdated dependency to remain safe from potential threats of vulnerabilities. In this study, we present an approach to aid developers show whether or not a vulnerable code is reachable for JavaScript projects. Our prototype, SōjiTantei, is evaluated in two ways (i) the accuracy when compared to a manual approach and (ii) a larger-scale analysis of 780 clients from 78 security vulnerability cases. The first evaluation shows that SōjiTantei has a high accuracy of 83.3%, with a speed of less than a second analysis per client. The second evaluation reveals that 68 out of the studied 78 vulnerabilities reported having at least one clean client. The study proves that automation is promising with the potential for further improvement.

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arXiv2021

More Than React: Investigating The Role of EmojiReaction in GitHub Pull Requests

Context: Open source software development has become more social and collaborative, especially with the rise of social coding platforms like GitHub. Since 2016, GitHub started to support more informal methods such as emoji reactions, with the goal to reduce commenting noise when reviewing any code changes to a repository. Interestingly, preliminary results indicate that emojis do not always reduce commenting noise (i.e., eight out of 20 emoji reactions), providing evidence that developers use emojis with ulterior intentions. From a reviewing context, the extent to which emoji reactions facilitate for a more efficient review process is unknown. Objective: In this registered report, we introduce the study protocols to investigate ulterior intentions and usages of emoji reactions, apart from reducing commenting noise during the discussions in GitHub pull requests (PRs). As part of the report, we first perform a preliminary analysis to whether emoji reactions can reduce commenting noise in PRs and then introduce the execution plan for the study. Method: We will use a mixed-methods approach in this study, i.e., quantitative and qualitative, with three hypotheses to test.

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arXiv2021

Contrasting Third-Party Package Management User Experience

The management of third-party package dependencies is crucial to most technology stacks, with package managers acting as brokers to ensure that a verified package is correctly installed, configured, or removed from an application. Diversity in technology stacks has led to dozens of package ecosystems with their own management features. While recent studies have shown that developers struggle to migrate their dependencies, the common assumption is that package ecosystems are used without any issue. In this study, we explore 13 package ecosystems to understand whether their features correlate with the experience of their users. By studying experience through the questions that developers ask on the question-and-answer site Stack Overflow, we find that developer questions are grouped into three themes (i.e., Package management, Input-Output, and Package Usage). Our preliminary analysis indicates that specific features are correlated with the user experience. Our work lays out future directions to investigate the trade-offs involved in designing the ideal package ecosystem.

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arXiv2021

PATSQL: Efficient Synthesis of SQL Queries from Example Tables with Quick Inference of Projected Columns

SQL is one of the most popular tools for data analysis, and it is now used by an increasing number of users without having expertise in databases. Several studies have proposed programming-by-example approaches to help such non-experts to write correct SQL queries. While existing methods support a variety of SQL features such as aggregation and nested query, they suffer a significant increase in computational cost as the scale of example tables increases. In this paper, we propose an efficient algorithm utilizing properties known in relational algebra to synthesize SQL queries from input and output tables. Our key insight is that a projection operator in a program sketch can be lifted above other operators by applying transformation rules in relational algebra, while preserving the semantics of the program. This enables a quick inference of appropriate columns in the projection operator, which is an essential component in synthesis but causes combinatorial explosions in prior work. We also introduce a novel form of constraints and its top-down propagation mechanism for efficient sketch completion. We implemented this algorithm in our tool PATSQL and evaluated it on 226 queries from prior benchmarks and Kaggle's tutorials. As a result, PATSQL solved 68% of the benchmarks and found 89% of the solutions within a second. Our tool is available at https://naist-se.github.io/patsql/.

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