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Tamer Oraby

Publications and source records attributed to Tamer Oraby.

12 recordsLinked to original sources

Spread of Chronic Wasting Disease under Stochastic Environmental Conditions and its Control using Deep Reinforcement Learning

Chronic wasting disease (CWD) is a fatal prion disease affecting deer, elk, moose, reindeer, muntjac, and other cervids. Because free-ranging cervid populations face environmental variability and randomness, deterministic models may miss important dynamics like stochastic fade-out. We develop a stochastic Susceptible-Infectious-Environmental model using differential equations with reflection to ensure the susceptible class remains non-negative. We examine how environmental variability influences cervid populations as CWD pressure and control measures increase. For the deterministic model, we derive the basic reproduction number as the sum of direct and environmental contributions, showing the endemic phase arises at R0=1. For the stochastic system, we establish local well-posedness, positivity, and the disease-free law. The top Lyapunov exponent for invasion remains unaffected by reflection. We evaluate CWD mitigation using a deep reinforcement learning agent trained with Proximal Policy Optimization in a hybrid action space, comparing hunting, decontamination, and combined strategies. In the deterministic case, hunting alone can control the disease but reduces the population by about 58%, while decontamination requires sustained effort. The combined policy more than doubles the cervid population and nearly eliminates infection and contamination. In the stochastic case, the policy contains the disease in about 80% of runs, with 10% experiencing large outbreaks; effectiveness decreases as noise increases. Across all scenarios, the agent consistently emphasizes environmental decontamination, the key control method.

q-bio.PE

Deep Learning for Early Alzheimer Disease Detection with MRI Scans

Alzheimer's Disease is a neurodegenerative condition characterized by dementia and impairment in neurological function. The study primarily focuses on the individuals above age 40, affecting their memory, behavior, and cognitive processes of the brain. Alzheimer's disease requires diagnosis by a detailed assessment of MRI scans and neuropsychological tests of the patients. This project compares existing deep learning models in the pursuit of enhancing the accuracy and efficiency of AD diagnosis, specifically focusing on the Convolutional Neural Network, Bayesian Convolutional Neural Network, and the U-net model with the Open Access Series of Imaging Studies brain MRI dataset. Besides, to ensure robustness and reliability in the model evaluations, we address the challenge of imbalance in data. We then perform rigorous evaluation to determine strengths and weaknesses for each model by considering sensitivity, specificity, and computational efficiency. This comparative analysis would shed light on the future role of AI in revolutionizing AD diagnostics but also paved ways for future innovation in medical imaging and the management of neurodegenerative diseases.

cs.CV

Insecticide treated bed net use and elimination of malaria in Sub-Saharan African countries: Assessing the Global Technical Strategy (GTS) using an evolutionary game approach

The WHO 2021 malaria report revealed that its Global Technical Strategy (GTS) 2020 milestones for morbidity and mortality, based on the 2015 baseline, have not been achieved globally -- the world is off-track by 42% and, can be extended up to 91% in 2030. Most of the Sub-Saharan African (SSA) countries failed to achieve GTS 2020 -- only 4 out of 40 highest burden countries met the goals. By fitting evolutionary game modeling to the malaria case and Insecticide-Treated Nets (ITN) usages data, we identify factors contributing to the GTS 2020 failures of 38 SSA countries. We use optimized projection of our model to evaluate further the potential achievement of GTS 2025 and 2030 objectives and discuss strategies for attaining goals in situations where these milestones seem unattainable. Our findings categorize all 38 countries based on the possibility to achieve their future milestone, either through increased campaigns, or by economic assistance, or through enhancing the efficacy of ITNs at minimal expense.

q-bio.PE

Stochastic games of parental vaccination decision making and bounded rationality

Vaccination is an effective strategy to prevent the spread of diseases. However, hesitancy and rejection of vaccines, particularly in childhood immunizations, pose challenges to vaccination efforts. In that case, according to rational decision-making and classical utility theory, parents weigh the costs of vaccination against the costs of not vaccinating their children. Social norms influence these parental decision-making outcomes, deviating their decisions from rationality. Additionally, variability in values of utilities stemming from stochasticity in parents' perceptions over time can lead to further deviations from rationality. In this paper, we employ independent white noises to represent stochastic fluctuations in parental perceptions of utility functions of the decisions over time, as well as in the disease transmission rates. This approach leads to a system of stochastic differential equations of a susceptible-infected-recovered (SIR) model coupled with a stochastic replicator equation. We explore the dynamics of these equations and identify new behaviors emerging from stochastic influences. Interestingly, incorporating stochasticity into the utility functions for vaccination and nonvaccination leads to a decision-making model that reflects the bounded rationality of humans. Noise, like social norms, is a two-sided sword that depends on the degree of bounded rationality of each group. We also perform a stochastic optimal control as a discount to the cost of vaccination to counteract bounded rationality.

math.PR

Exact Solutions of Stochastic Burgers-KdV Equation with variable coefficients

We will present exact solutions for three variations of stochastic Korteweg de Vries-Burgers (KdV-Burgers) equation featuring variable coefficients. In each variant, white noise exhibits spatial uniformity, and the three categories include additive, multiplicative, and advection noise. Across all cases, the coefficients are time-dependent functions. Our discovery indicates that solving certain deterministic counterparts of KdV-Burgers equations and composing the solution with a solution of stochastic differential equations leads to the exact solution of the stochastic Korteweg de Vries-Burgers (KdV-Burgers) equations.

math-ph

Functional data learning using convolutional neural networks

In this paper, we show how convolutional neural networks (CNN) can be used in regression and classification learning problems of noisy and non-noisy functional data. The main idea is to transform the functional data into a 28 by 28 image. We use a specific but typical architecture of a convolutional neural network to perform all the regression exercises of parameter estimation and functional form classification. First, we use some functional case studies of functional data with and without random noise to showcase the strength of the new method. In particular, we use it to estimate exponential growth and decay rates, the bandwidths of sine and cosine functions, and the magnitudes and widths of curve peaks. We also use it to classify the monotonicity and curvatures of functional data, algebraic versus exponential growth, and the number of peaks of functional data. Second, we apply the same convolutional neural networks to Lyapunov exponent estimation in noisy and non-noisy chaotic data, in estimating rates of disease transmission from epidemic curves, and in detecting the similarity of drug dissolution profiles. Finally, we apply the method to real-life data to detect Parkinson's disease patients in a classification problem. The method, although simple, shows high accuracy and is promising for future use in engineering and medical applications.

cs.LG

Probabilistic solutions of fractional differential and partial differential equations and their Monte Carlo simulations

The work in this paper is four-fold. Firstly, we introduce an alternative approach to solve fractional ordinary differential equations as an expected value of a random time process. Using the latter, we present an interesting numerical approach based on Monte Carlo integration to simulate solutions of fractional ordinary and partial differential equations. Thirdly, we show that this approach allows us to find the fundamental solutions for fractional partial differential equations (PDEs), in which the fractional derivative in time is in the Caputo sense and the fractional in space one is in the Riesz-Feller sense. Lastly, using Riccati equation, we study families of fractional PDEs with variable coefficients which allow explicit solutions. Those solutions connect Lie symmetries to fractional PDEs.

math.DS

Modeling the Effect of Observational Social Learning on Parental Decision-Making for Childhood Vaccination and Diseases Spread over Household Networks

In this paper, we introduce a new model of parental decision-making concerning vaccines against a childhood disease that spreads over a contact network. We consider a bilayer network composed of two overlapping networks which are either Erd\H{o}s-R\'{e}nyi (random) networks or Barab\'{a}si-Albert networks. The new model uses a Bayesian aggregation rule for observational social learning, occurring over a social network, of which other decision models, like voting and DeGroot models, are special cases. Using our new model, we show how some levels of social learning about vaccination preferences can lead to the convergence of opinions and affect levels of vaccine uptake and so disease spread. In addition, we study the effect of the existence of two cultures of social learning on the establishment of social norms of vaccination and levels of vaccine uptake. In all cases, the mutual influence between the dynamics of observational social learning and disease spread is dependent on the network's topology and vaccine safety and availability.

physics.soc-ph

On slow-fading non-separable correlation MIMO systems

In a frequency selective slow-fading channel in a MIMO system, the channel matrix is of the form of a block matrix. We propose a method to calculate the limit of the eigenvalue distribution of block matrices if the size of the blocks tends to infinity. We will also calculate the asymptotic eigenvalue distribution of $HH^*$, where the entries of $H$ are jointly Gaussian, with a correlation of the form $E[h_{pj}\bar h_{qk}]= \sum_{s=1}^t Ψ^{(s)}_{jk}\hatΨ^{(s)}_{pq}$ (where $t$ is fixed and does not increase with the size of the matrix). We will use an operator-valued free probability approach to achieve this goal. Using this method, we derive a system of equations, which can be solved numerically to compute the desired eigenvalue distribution.

cs.IT

The spectral laws of Hermitian block-matrices with large random blocks

We are going to study the limiting spectral measure of fixed dimensional Hermitian block-matrices with large dimensional Wigner blocks. We are going also to identify the limiting spectral measure when the Hermitian block-structure is Circulant. Using the limiting spectral measure of a Hermitian Circulant block-matrix we will show that the spectral measure of a Wigner matrix with $k-$weakly dependent entries need not to be the semicircle law in the limit.

math.PR

The Limiting Spectra of Girko's Block-Matrix

To analyze the limiting spectral distribution of some random block-matrices, Girko [Girko, 2000] uses a system of canonical equations from [Girko, 98]. In this paper, we use the method of moments to give an integral form for the almost sure limiting spectral distribution of such matrices.

math.PR

Spectra of large block matrices

In a frequency selective slow-fading channel in a MIMO system, the channel matrix is of the form of a block matrix. This paper proposes a method to calculate the limit of the eigenvalue distribution of block matrices if the size of the blocks tends to infinity. While it considers random matrices, it takes an operator-valued free probability approach to achieve this goal. Using this method, one derives a system of equations, which can be solved numerically to compute the desired eigenvalue distribution. The paper initially tackles the problem for square block matrices, then extends the solution to rectangular block matrices. Finally, it deals with Wishart type block matrices. For two special cases, the results of our approach are compared with results from simulations. The first scenario investigates the limit eigenvalue distribution of block Toeplitz matrices. The second scenario deals with the distribution of Wishart type block matrices for a frequency selective slow-fading channel in a MIMO system for two different cases of $n_R=n_T$ and $n_R=2n_T$. Using this method, one may calculate the capacity and the Signal-to-Interference-and-Noise Ratio in large MIMO systems.

cs.IT