arXiv subjects

Terry Lyons

Publications and source records attributed to Terry Lyons.

At least 37 records · Page 2Linked to original sources

arXiv2025

Theoretical Foundations of Deep Selective State-Space Models

Structured state-space models (SSMs) such as S4, stemming from the seminal work of Gu et al., are gaining popularity as effective approaches for modeling sequential data. Deep SSMs demonstrate outstanding performance across a diverse set of domains, at a reduced training and inference cost compared to attention-based transformers. Recent developments show that if the linear recurrence powering SSMs allows for multiplicative interactions between inputs and hidden states (e.g. GateLoop, Mamba, GLA), then the resulting architecture can surpass in both in accuracy and efficiency attention-powered foundation models trained on text, at scales of billion parameters. In this paper, we give theoretical grounding to this recent finding using tools from Rough Path Theory: we show that when random linear recurrences are equipped with simple input-controlled transitions (selectivity mechanism), then the hidden state is provably a low-dimensional projection of a powerful mathematical object called the signature of the input -- capturing non-linear interactions between tokens at distinct timescales. Our theory not only motivates the success of modern selective state-space models such as Mamba but also provides a solid framework to understand the expressive power of future SSM variants.

cs.LG↗

arXiv2024

Transforming CCTV cameras into NO$_2$ sensors at city scale for adaptive policymaking

Air pollution in cities, especially NO\textsubscript{2}, is linked to numerous health problems, ranging from mortality to mental health challenges and attention deficits in children. While cities globally have initiated policies to curtail emissions, real-time monitoring remains challenging due to limited environmental sensors and their inconsistent distribution. This gap hinders the creation of adaptive urban policies that respond to the sequence of events and daily activities affecting pollution in cities. Here, we demonstrate how city CCTV cameras can act as a pseudo-NO\textsubscript{2} sensors. Using a predictive graph deep model, we utilised traffic flow from London's cameras in addition to environmental and spatial factors, generating NO\textsubscript{2} predictions from over 133 million frames. Our analysis of London's mobility patterns unveiled critical spatiotemporal connections, showing how specific traffic patterns affect NO\textsubscript{2} levels, sometimes with temporal lags of up to 6 hours. For instance, if trucks only drive at night, their effects on NO\textsubscript{2} levels are most likely to be seen in the morning when people commute. These findings cast doubt on the efficacy of some of the urban policies currently being implemented to reduce pollution. By leveraging existing camera infrastructure and our introduced methods, city planners and policymakers could cost-effectively monitor and mitigate the impact of NO\textsubscript{2} and other pollutants.

cs.LG↗

arXiv2024

Combining Hough Transform and Deep Learning Approaches to Reconstruct ECG Signals From Printouts

This work presents our team's (SignalSavants) winning contribution to the 2024 George B. Moody PhysioNet Challenge. The Challenge had two goals: reconstruct ECG signals from printouts and classify them for cardiac diseases. Our focus was the first task. Despite many ECGs being digitally recorded today, paper ECGs remain common throughout the world. Digitising them could help build more diverse datasets and enable automated analyses. However, the presence of varying recording standards and poor image quality requires a data-centric approach for developing robust models that can generalise effectively. Our approach combines the creation of a diverse training set, Hough transform to rotate images, a U-Net based segmentation model to identify individual signals, and mask vectorisation to reconstruct the signals. We assessed the performance of our models using the 10-fold stratified cross-validation (CV) split of 21,799 recordings proposed by the PTB-XL dataset. On the digitisation task, our model achieved an average CV signal-to-noise ratio of 17.02 and an official Challenge score of 12.15 on the hidden set, securing first place in the competition. Our study shows the challenges of building robust, generalisable, digitisation approaches. Such models require large amounts of resources (data, time, and computational power) but have great potential in diversifying the data available.

cs.LG↗

arXiv2024

Higher Order Lipschitz Greedy Recombination Interpolation Method (HOLGRIM)

In this paper we introduce the Higher Order Lipschitz Greedy Recombination Interpolation Method (HOLGRIM) for finding sparse approximations of Lip$(γ)$ functions, in the sense of Stein, given as a linear combination of a (large) number of simpler Lip$(γ)$ functions. HOLGRIM is developed as a refinement of the Greedy Recombination Interpolation Method (GRIM) in the setting of Lip$(γ)$ functions. HOLGRIM combines dynamic growth-based interpolation techniques with thinning-based reduction techniques in a data-driven fashion. The dynamic growth is driven by a greedy selection algorithm in which multiple new points may be selected at each step. The thinning reduction is carried out by recombination, the linear algebra technique utilised by GRIM. We establish that the number of non-zero weights for the approximation returned by HOLGRIM is controlled by a particular packing number of the data. The level of data concentration required to guarantee that HOLGRIM returns a good sparse approximation is decreasing with respect to the regularity parameter $γ> 0$. Further, we establish complexity cost estimates verifying that implementing HOLGRIM is feasible.

math.NA↗

arXiv2024

Novelty Detection on Radio Astronomy Data using Signatures

We introduce SigNova, a new semi-supervised framework for detecting anomalies in streamed data. While our initial examples focus on detecting radio-frequency interference (RFI) in digitized signals within the field of radio astronomy, it is important to note that SigNova's applicability extends to any type of streamed data. The framework comprises three primary components. Firstly, we use the signature transform to extract a canonical collection of summary statistics from observational sequences. This allows us to represent variable-length visibility samples as finite-dimensional feature vectors. Secondly, each feature vector is assigned a novelty score, calculated as the Mahalanobis distance to its nearest neighbor in an RFI-free training set. By thresholding these scores we identify observation ranges that deviate from the expected behavior of RFI-free visibility samples without relying on stringent distributional assumptions. Thirdly, we integrate this anomaly detector with Pysegments, a segmentation algorithm, to localize consecutive observations contaminated with RFI, if any. This approach provides a compelling alternative to classical windowing techniques commonly used for RFI detection. Importantly, the complexity of our algorithm depends on the RFI pattern rather than on the size of the observation window. We demonstrate how SigNova improves the detection of various types of RFI (e.g., broadband and narrowband) in time-frequency visibility data. We validate our framework on the Murchison Widefield Array (MWA) telescope and simulated data and the Hydrogen Epoch of Reionization Array (HERA).

astro-ph.IM↗

arXiv2024

Multimodal deep learning approach to predicting neurological recovery from coma after cardiac arrest

This work showcases our team's (The BEEGees) contributions to the 2023 George B. Moody PhysioNet Challenge. The aim was to predict neurological recovery from coma following cardiac arrest using clinical data and time-series such as multi-channel EEG and ECG signals. Our modelling approach is multimodal, based on two-dimensional spectrogram representations derived from numerous EEG channels, alongside the integration of clinical data and features extracted directly from EEG recordings. Our submitted model achieved a Challenge score of $0.53$ on the hidden test set for predictions made $72$ hours after return of spontaneous circulation. Our study shows the efficacy and limitations of employing transfer learning in medical classification. With regard to prospective implementation, our analysis reveals that the performance of the model is strongly linked to the selection of a decision threshold and exhibits strong variability across data splits.

cs.LG↗

arXiv2024

Greedy Recombination Interpolation Method (GRIM)

In this paper we develop the Greedy Recombination Interpolation Method (GRIM) for finding sparse approximations of functions initially given as linear combinations of some (large) number of simpler functions. In a similar spirit to the CoSaMP algorithm, GRIM combines dynamic growth-based interpolation techniques and thinning-based reduction techniques. The dynamic growth-based aspect is a modification of the greedy growth utilised in the Generalised Empirical Interpolation Method (GEIM). A consequence of the modification is that our growth is not restricted to being one-per-step as it is in GEIM. The thinning-based aspect is carried out by recombination, which is the crucial component of the recent ground-breaking convex kernel quadrature method. GRIM provides the first use of recombination outside the setting of reducing the support of a measure. The sparsity of the approximation found by GRIM is controlled by the geometric concentration of the data in a sense that is related to a particular packing number of the data. We apply GRIM to a kernel quadrature task for the radial basis function kernel, and verify that its performance matches that of other contemporary kernel quadrature techniques.

math.NA↗

arXiv2024

A PDE approach for solving the characteristic function of the generalised signature process

The signature of a path, as a fundamental object in Rough path theory, serves as a generating function for non-commutative monomials on path space. It transforms the path into a grouplike element in the tensor algebra space, summarising the path faithfully up to a generalised form of re-parameterisation (a negligible equivalence class in this context). Our paper concerns stochastic processes and studies the characteristic function of the path signature of the stochastic process. In contrast to the expected signature, it determines the law on the random signatures without any regularity condition. The computation of the characteristic function of the random signature offers potential applications in stochastic analysis and machine learning, where the expected signature plays an important role. In this paper, we focus on a time-homogeneous Itô diffusion process, and adopt a PDE approach to derive the characteristic function of its signature defined at any fixed time horizon. A key ingredient of our approach is the introduction of the generalised-signature process. This lifting enables us to establish the Feynman-Kac-type theorem for the characteristic function of the generalised-signature process by following the martingale approach. Moreover, as an application of our results, we present a novel derivation of the joint characteristic function of Brownian motion coupled with the Lévy area, leveraging the structure theorem of anti-symmetric matrices.

math.PR↗

arXiv2024

Optimistix: modular optimisation in JAX and Equinox

We introduce Optimistix: a nonlinear optimisation library built in JAX and Equinox. Optimistix introduces a novel, modular approach for its minimisers and least-squares solvers. This modularity relies on new practical abstractions for optimisation which we call search and descent, and which generalise classical notions of line search, trust-region, and learning-rate algorithms. It provides high-level APIs and solvers for minimisation, nonlinear least-squares, root-finding, and fixed-point iteration. Optimistix is available at https://github.com/patrick-kidger/optimistix.

math.OC↗

arXiv2024

Sig-Networks Toolkit: Signature Networks for Longitudinal Language Modelling

We present an open-source, pip installable toolkit, Sig-Networks, the first of its kind for longitudinal language modelling. A central focus is the incorporation of Signature-based Neural Network models, which have recently shown success in temporal tasks. We apply and extend published research providing a full suite of signature-based models. Their components can be used as PyTorch building blocks in future architectures. Sig-Networks enables task-agnostic dataset plug-in, seamless pre-processing for sequential data, parameter flexibility, automated tuning across a range of models. We examine signature networks under three different NLP tasks of varying temporal granularity: counselling conversations, rumour stance switch and mood changes in social media threads, showing SOTA performance in all three, and provide guidance for future tasks. We release the Toolkit as a PyTorch package with an introductory video, Git repositories for preprocessing and modelling including sample notebooks on the modeled NLP tasks.

cs.CL↗

arXiv2023

Flow techniques for non-geometric RDEs on manifolds

In 2015, Bailleul presented a mechanism to solve rough differential equations by constructing flows, using the log-ODE method. We extend this notion in two ways: On the one hand, we localize Bailleul's notion of an almost-flow to solve RDEs on manifolds. On the other hand, we extend his results to non-geometric rough paths, living in any connected, cocommutative, graded Hopf algebra. This requires a new concept, which we call a pseudo bialgebra map. We further connect our results to Curry et al (2020), who solved planarly branched RDEs on homogeneous spaces.

math.PR↗

arXiv2023

Dimensionless Anomaly Detection on Multivariate Streams with Variance Norm and Path Signature

In this paper, we propose a dimensionless anomaly detection method for multivariate streams. Our method is independent of the unit of measurement for the different stream channels, therefore dimensionless. We first propose the variance norm, a generalisation of Mahalanobis distance to handle infinite-dimensional feature space and singular empirical covariance matrix rigorously. We then combine the variance norm with the path signature, an infinite collection of iterated integrals that provide global features of streams, to propose SigMahaKNN, a method for anomaly detection on (multivariate) streams. We show that SigMahaKNN is invariant to stream reparametrisation, stream concatenation and has a graded discrimination power depending on the truncation level of the path signature. We implement SigMahaKNN as an open-source software, and perform extensive numerical experiments, showing significantly improved anomaly detection on streams compared to isolation forest and local outlier factors in applications ranging from language analysis, hand-writing analysis, ship movement paths analysis and univariate time-series analysis.

cs.LG↗

arXiv2023

Lineax: unified linear solves and linear least-squares in JAX and Equinox

We introduce Lineax, a library bringing linear solves and linear least-squares to the JAX+Equinox scientific computing ecosystem. Lineax uses general linear operators, and unifies linear solves and least-squares into a single, autodifferentiable API. Solvers and operators are user-extensible, without requiring the user to implement any custom derivative rules to get differentiability. Lineax is available at https://github.com/google/lineax.

cs.MS↗

arXiv2023

The insertion method to invert the signature of a path

The signature is a representation of a path as an infinite sequence of its iterated integrals. Under certain assumptions, the signature characterizes the path, up to translation and reparameterization. Therefore, a crucial question of interest is the development of efficient algorithms to invert the signature, i.e., to reconstruct the path from the information of its (truncated) signature. In this article, we study the insertion procedure, originally introduced by Chang and Lyons (2019), from both a theoretical and a practical point of view. After describing our version of the method, we give its rate of convergence for piecewise linear paths, accompanied by an implementation in Pytorch. The algorithm is parallelized, meaning that it is very efficient at inverting a batch of signatures simultaneously. Its performance is illustrated with both real-world and simulated examples.

stat.ME↗

arXiv2023

FaceTouch: Detecting hand-to-face touch with supervised contrastive learning to assist in tracing infectious disease

Through our respiratory system, many viruses and diseases frequently spread and pass from one person to another. Covid-19 served as an example of how crucial it is to track down and cut back on contacts to stop its spread. There is a clear gap in finding automatic methods that can detect hand-to-face contact in complex urban scenes or indoors. In this paper, we introduce a computer vision framework, called FaceTouch, based on deep learning. It comprises deep sub-models to detect humans and analyse their actions. FaceTouch seeks to detect hand-to-face touches in the wild, such as through video chats, bus footage, or CCTV feeds. Despite partial occlusion of faces, the introduced system learns to detect face touches from the RGB representation of a given scene by utilising the representation of the body gestures such as arm movement. This has been demonstrated to be useful in complex urban scenarios beyond simply identifying hand movement and its closeness to faces. Relying on Supervised Contrastive Learning, the introduced model is trained on our collected dataset, given the absence of other benchmark datasets. The framework shows a strong validation in unseen datasets which opens the door for potential deployment.

cs.CV↗

arXiv2023

Unbiased Decisions Reduce Regret: Adversarial Domain Adaptation for the Bank Loan Problem

In many real world settings binary classification decisions are made based on limited data in near real-time, e.g. when assessing a loan application. We focus on a class of these problems that share a common feature: the true label is only observed when a data point is assigned a positive label by the principal, e.g. we only find out whether an applicant defaults if we accepted their loan application. As a consequence, the false rejections become self-reinforcing and cause the labelled training set, that is being continuously updated by the model decisions, to accumulate bias. Prior work mitigates this effect by injecting optimism into the model, however this comes at the cost of increased false acceptance rate. We introduce adversarial optimism (AdOpt) to directly address bias in the training set using adversarial domain adaptation. The goal of AdOpt is to learn an unbiased but informative representation of past data, by reducing the distributional shift between the set of accepted data points and all data points seen thus far. AdOpt significantly exceeds state-of-the-art performance on a set of challenging benchmark problems. Our experiments also provide initial evidence that the introduction of adversarial domain adaptation improves fairness in this setting.

cs.LG↗

arXiv2023

A structure theorem for streamed information

We identify the free half shuffle algebra of Schützenberger (1958) with an algebra of real-valued functionals on paths, where the half shuffle emulates integration of a functional against another. We then provide two, to our knowledge, new identities in arity 3 involving its commutator (area), and show that these are sufficient to recover the Zinbiel and Tortkara identities of Dzhumadil'daev (2007). We use these identities to prove that any element of the free half shuffle algebra can be expressed as a polynomial over iterated areas. Moreover, we consider minimal sets of iterated integrals defined through the recursive application of the half shuffle on Hall trees. Leveraging the duality between this set of Hall integrals and classical Hall bases of the free Lie algebra, we prove using combinatorial arguments that any element of the free half shuffle algebra can be written uniquely as a polynomial over Hall integrals. We interpret this result as a structure theorem for streamed information, loosely analogous to the unique prime factorisation of integers, allowing to split any real valued function on streamed data into two parts: a first that extracts and packages the streamed information into recursively defined atomic objects (Hall integrals), and a second that evaluates a polynomial function in these objects without further reference to the original stream. The question of whether a similar result holds if Hall integrals are replaced by Hall areas is left as an open conjecture. Finally, we construct a canonical, but to our knowledge, new decomposition of the free half shuffle algebra as shuffle power series in the greatest letter of the original alphabet with coefficients in a sub-algebra freely generated by a new alphabet with an infinite number of letters. We use this construction to provide a second proof of our structure theorem.

math.CO↗

arXiv2023

An Adaptive Algorithm for Rough Differential Equations

We present an adaptive algorithm for effectively solving rough differential equations (RDEs) using the log-ODE method. The algorithm is based on an error representation formula that accurately describes the contribution of local errors to the global error. By incorporating a cost model, our algorithm efficiently determines whether to refine the time grid or increase the order of the log-ODE method. In addition, we provide several examples that demonstrate the effectiveness of our adaptive algorithm in solving RDEs.

math.NA↗