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Tevfik Can Yuce

Publications and source records attributed to Tevfik Can Yuce.

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Large-scale orientational order in bacterial colonies during inward growth

During colony growth, complex interactions regulate the bacterial orientation, leading to the formation of large-scale ordered structures, including topological defects and microdomains. These structures may benefit bacterial strains, providing invasive advantages during colonization. Active matter dynamics of growing colonies drives the emergence of these ordered structures. However, additional biomechanical factors also play a significant role during this process. Here we show that the velocity profile of growing colonies creates strong radial orientation during inward growth when crowded populations invade a closed area. During this process, growth geometry sets virtual confinement and dictates the velocity profile. Herein, flow-induced alignment and torque balance on the rod-shaped bacteria significantly differed, resulting in new stable orientational equilibrium in the radial direction. Our analysis revealed that the dynamics of these orientational defects depend on bacterial length and can promote the survival of the longest bacteria around localized nutritional hot spots. The present results indicate a new mechanism underlying structural order and provide mechanistic insights into the dynamics of bacterial growth on complex surfaces.

physics.bio-ph

Optimal storage time for $N$ qubits coupled to a one-dimensional waveguide

Symmetry-protected subradiance is known to guarantee high qubit storage times in free space. We show that in one-dimensional waveguides, this is also true, but that even longer qubit storage times can be identified by considering the eigenspectrum of the qubit-qubit coupling matrix. In the process, we introduce three theorems about $N$ qubits coupled to a one-dimensional waveguide: i) the coupling matrix, which is otherwise non-singular over a continuum of qubit separation values, contains point-singularities; ii) the collective decay rates have symmetric properties, and iii) a linear chain of qubits coupled to a one-dimensional waveguide exhibits symmetry-protected subradiance. Our results will be beneficial for designing memory applications for future quantum technologies.

quant-ph