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Thalea Schlender

Publications and source records attributed to Thalea Schlender.

7 recordsLinked to original sources

Evolving Features vs Evolving Entire Trees with GP for Interpretable Survival Analysis

Survival analysis concerns the task of predicting the time until an event occurs. Often used in the medical field, survival analysis deals with incomplete (i.e., censored) data, for instance, from patients who did not experience the event during the duration of the study. For practical use, both accuracy and interpretability are important. Survival trees are easy-to-follow survival models that split the patient cohort recursively into discrete patient groups. Whilst survival trees can capture complex relationships, they typically need to grow large, threatening interpretability. Moreover, survival trees are often built using greedy approaches that may overlook globally optimal split combinations, limiting predictive performance. Shallow survival trees require expressive, higher-order feature combinations to achieve competitive accuracy. We therefore use genetic programming to multi-objectively evolve inherently inspectable feature sets and study how they interact with different tree induction strategies. We further introduce an evolutionary approach that jointly optimises the survival tree structure and the non-linear split logic. Our findings demonstrate that evolutionary feature construction improves predictive performance across different tree induction strategies on two real-world datasets and two different survival tree depths. Given its speed and flexible presentation, the multi-objective evolution of entire trees likely holds the most future promise.

cs.LG

Parallel Adaptive Multi-Objective Evolutionary Learning of Discretized Bayesian Network Classifiers for Clinical Data

Bayesian Networks (BNs) are of interest from an explainable AI viewpoint, offering transparent probabilistic models for decision support. Baymex is a recently introduced multi-objective evolutionary algorithm for learning discretized BNs, enabling experts to trade-off different objectives of interest, such as likelihood, model complexity, and prior beliefs. While Baymex has been shown to outperform state-of-the-art BN learning approaches, Baymex still 1) requires a lot of computation time and 2) has only been evaluated on synthetic data. To improve scalability, we introduce a parallelization strategy as well as a mechanism that enables adaptively steering optimization toward networks that overfit less. We furthermore reconfigure Baymex to train a BN classifier through multi-objective optimization of cross-entropy loss and the BIC complexity term so as to evaluate its performance on real-world clinical classification tasks. Besides observing speedups up to over 54 times on a 16-core CPU, comparisons against clinically familiar baselines (decision trees, logistic regression, naive Bayes, and random forests) on two open-source (RADCURE and SUPPORT) and one in-house dataset, show that Baymex obtains statistically similar or better predictive performance while producing compact, clinically inspectable BNs. Importantly, Baymex finds multiple plausible BN classifiers that contain predictors consistent with established clinical factors.

cs.LG

PISA: An AI Pipeline for Interpretable-by-design Survival Analysis Providing Multiple Complexity-Accuracy Trade-off Models

Survival analysis is central to clinical research, informing patient prognoses, guiding treatment decisions, and optimising resource allocation. Accurate time-to-event predictions not only improve quality of life but also reveal risk factors that shape clinical practice. For these models to be relevant in healthcare, interpretability is critical: predictions must be traceable to patient-specific characteristics, and risk factors should be identifiable to generate actionable insights for both clinicians and researchers. Traditional survival models often fail to capture non-linear interactions, while modern deep learning approaches, though powerful, are limited by poor interpretability. We propose a Pipeline for Interpretable Survival Analysis (PISA) - a pipeline that provides multiple survival analysis models that trade off complexity and performance. Using multiple-feature, multi-objective feature engineering, PISA transforms patient characteristics and time-to-event data into multiple survival analysis models, providing valuable insights into the survival prediction task. Crucially, every model is converted into simple patient stratification flowcharts supported by Kaplan-Meier curves, whilst not compromising on performance. While PISA is model-agnostic, we illustrate its flexibility through applications of Cox regression and shallow survival trees, the latter avoiding proportional hazards assumptions. Applied to two clinical benchmark datasets, PISA produced interpretable survival models and intuitive stratification flowcharts whilst achieving state-of-the-art performances. Revisiting a prior departmental study further demonstrated its capacity to automate survival analysis workflows in real-world clinical research.

stat.AP

A Step towards Interpretable Multimodal AI Models with MultiFIX

Real-world problems are often dependent on multiple data modalities, making multimodal fusion essential for leveraging diverse information sources. In high-stakes domains, such as in healthcare, understanding how each modality contributes to the prediction is critical to ensure trustworthy and interpretable AI models. We present MultiFIX, an interpretability-driven multimodal data fusion pipeline that explicitly engineers distinct features from different modalities and combines them to make the final prediction. Initially, only deep learning components are used to train a model from data. The black-box (deep learning) components are subsequently either explained using post-hoc methods such as Grad-CAM for images or fully replaced by interpretable blocks, namely symbolic expressions for tabular data, resulting in an explainable model. We study the use of MultiFIX using several training strategies for feature extraction and predictive modeling. Besides highlighting strengths and weaknesses of MultiFIX, experiments on a variety of synthetic datasets with varying degrees of interaction between modalities demonstrate that MultiFIX can generate multimodal models that can be used to accurately explain both the extracted features and their integration without compromising predictive performance.

cs.NE

MultiFIX: An XAI-friendly feature inducing approach to building models from multimodal data

In the health domain, decisions are often based on different data modalities. Thus, when creating prediction models, multimodal fusion approaches that can extract and combine relevant features from different data modalities, can be highly beneficial. Furthermore, it is important to understand how each modality impacts the final prediction, especially in high-stake domains, so that these models can be used in a trustworthy and responsible manner. We propose MultiFIX: a new interpretability-focused multimodal data fusion pipeline that explicitly induces separate features from different data types that can subsequently be combined to make a final prediction. An end-to-end deep learning architecture is used to train a predictive model and extract representative features of each modality. Each part of the model is then explained using explainable artificial intelligence techniques. Attention maps are used to highlight important regions in image inputs. Inherently interpretable symbolic expressions, learned with GP-GOMEA, are used to describe the contribution of tabular inputs. The fusion of the extracted features to predict the target label is also replaced by a symbolic expression, learned with GP-GOMEA. Results on synthetic problems demonstrate the strengths and limitations of MultiFIX. Lastly, we apply MultiFIX to a publicly available dataset for the detection of malignant skin lesions.

cs.AI

Improving the efficiency of GP-GOMEA for higher-arity operators

Deploying machine learning models into sensitive domains in our society requires these models to be explainable. Genetic Programming (GP) can offer a way to evolve inherently interpretable expressions. GP-GOMEA is a form of GP that has been found particularly effective at evolving expressions that are accurate yet of limited size and, thus, promote interpretability. Despite this strength, a limitation of GP-GOMEA is template-based. This negatively affects its scalability regarding the arity of operators that can be used, since with increasing operator arity, an increasingly large part of the template tends to go unused. In this paper, we therefore propose two enhancements to GP-GOMEA: (i) semantic subtree inheritance, which performs additional variation steps that consider the semantic context of a subtree, and (ii) greedy child selection, which explicitly considers parts of the template that in standard GP-GOMEA remain unused. We compare different versions of GP-GOMEA regarding search enhancements on a set of continuous and discontinuous regression problems, with varying tree depths and operator sets. Experimental results show that both proposed search enhancements have a generally positive impact on the performance of GP-GOMEA, especially when the set of operators to choose from is large and contains higher-arity operators.

cs.NE

"Thy algorithm shalt not bear false witness": An Evaluation of Multiclass Debiasing Methods on Word Embeddings

With the vast development and employment of artificial intelligence applications, research into the fairness of these algorithms has been increased. Specifically, in the natural language processing domain, it has been shown that social biases persist in word embeddings and are thus in danger of amplifying these biases when used. As an example of social bias, religious biases are shown to persist in word embeddings and the need for its removal is highlighted. This paper investigates the state-of-the-art multiclass debiasing techniques: Hard debiasing, SoftWEAT debiasing and Conceptor debiasing. It evaluates their performance when removing religious bias on a common basis by quantifying bias removal via the Word Embedding Association Test (WEAT), Mean Average Cosine Similarity (MAC) and the Relative Negative Sentiment Bias (RNSB). By investigating the religious bias removal on three widely used word embeddings, namely: Word2Vec, GloVe, and ConceptNet, it is shown that the preferred method is ConceptorDebiasing. Specifically, this technique manages to decrease the measured religious bias on average by 82,42%, 96,78% and 54,76% for the three word embedding sets respectively.

cs.CL