arXiv subjects

Thanh-Tung Nguyen

Publications and source records attributed to Thanh-Tung Nguyen.

At least 19 recordsLinked to original sources

arXiv2025

How2Compress: Scalable and Efficient Edge Video Analytics via Adaptive Granular Video Compression

With the rapid proliferation of the Internet of Things, video analytics has become a cornerstone application in wireless multimedia sensor networks. To support such applications under bandwidth constraints, learning-based adaptive quantization for video compression have demonstrated strong potential in reducing bitrate while maintaining analytical accuracy. However, existing frameworks often fail to fully exploit the fine-grained quality control enabled by modern blockbased video codecs, leaving significant compression efficiency untapped. In this paper, we present How2Compress, a simple yet effective framework designed to enhance video compression efficiency through precise, fine-grained quality control at the macroblock level. How2Compress is a plug-and-play module and can be seamlessly integrated into any existing edge video analytics pipelines. We implement How2Compress on the H.264 codec and evaluate its performance across diverse real-world scenarios. Experimental results show that How2Compress achieves up to $50.4\%$ bitrate savings and outperforms baselines by up to $3.01\times$ without compromising accuracy, demonstrating its practical effectiveness and efficiency. Code is available at https://github.com/wyhallenwu/how2compress and a reproducible docker image at https://hub.docker.com/r/wuyuheng/how2compress.

cs.MM↗

arXiv2025

FCPO: Federated Continual Policy Optimization for Real-Time High-Throughput Edge Video Analytics

The growing complexity of Edge Video Analytics (EVA) facilitates new kind of intelligent applications, but creates challenges in real-time inference serving systems. State-of-the-art (SOTA) scheduling systems optimize global workload distributions for heterogeneous devices but often suffer from extended scheduling cycles, leading to sub-optimal processing in rapidly changing Edge environments. Local Reinforcement Learning (RL) enables quick adjustments between cycles but faces scalability, knowledge integration, and adaptability issues. Thus, we propose FCPO, which combines Continual RL (CRL) with Federated RL (FRL) to address these challenges. This integration dynamically adjusts inference batch sizes, input resolutions, and multi-threading during pre- and post-processing. CRL allows agents to learn from changing Markov Decision Processes, capturing dynamic environmental variations, while FRL improves generalization and convergence speed by integrating experiences across inference models. FCPO combines these via an agent-specific aggregation scheme and a diversity-aware experience buffer. Experiments on a real-world EVA testbed showed over 5 times improvement in effective throughput, 60% reduced latency, and 20% faster convergence with up to 10 times less memory consumption compared to SOTA RL-based approaches.

cs.DC↗

arXiv2025

LLMs are not Zero-Shot Reasoners for Biomedical Information Extraction

Large Language Models (LLMs) are increasingly adopted for applications in healthcare, reaching the performance of domain experts on tasks such as question answering and document summarisation. Despite their success on these tasks, it is unclear how well LLMs perform on tasks that are traditionally pursued in the biomedical domain, such as structured information extraction. To bridge this gap, in this paper, we systematically benchmark LLM performance in Medical Classification and Named Entity Recognition (NER) tasks. We aim to disentangle the contribution of different factors to the performance, particularly the impact of LLMs' task knowledge and reasoning capabilities, their (parametric) domain knowledge, and addition of external knowledge. To this end, we evaluate various open LLMs - including BioMistral and Llama-2 models - on a diverse set of biomedical datasets, using standard prompting, Chain of-Thought (CoT) and Self Consistency based reasoning as well as Retrieval-Augmented Generation (RAG) with PubMed and Wikipedia corpora. Counter intuitively, our results reveal that standard prompting consistently outperforms more complex techniques across both tasks, laying bare the limitations in the current application of CoT, self-consistency and RAG in the biomedical domain. Our findings suggest that advanced prompting methods developed for knowledge- or reasoning-intensive tasks, such as CoT or RAG, are not easily portable to biomedical tasks where precise structured outputs are required. This highlights the need for more effective integration of external knowledge and reasoning mechanisms in LLMs to enhance their performance in real-world biomedical applications.

cs.CL↗

arXiv2025

OCTOPINF: Workload-Aware Inference Serving for Edge Video Analytics

Edge Video Analytics (EVA) has gained significant attention as a major application of pervasive computing, enabling real-time visual processing. EVA pipelines, composed of deep neural networks (DNNs), typically demand efficient inference serving under stringent latency requirements, which is challenging due to the dynamic Edge environments (e.g., workload variability and network instability). Moreover, EVA pipelines also face significant resource contention caused by resource (e.g., GPU) constraints at the Edge. In this paper, we introduce OCTOPINF, a novel resource-efficient and workload-aware inference serving system designed for real-time EVA. OCTOPINF tackles the unique challenges of dynamic edge environments through fine-grained resource allocation, adaptive batching, and workload balancing between edge devices and servers. Furthermore, we propose a spatiotemporal scheduling algorithm that optimizes the co-location of inference tasks on GPUs, improving performance and ensuring service-level objectives (SLOs) compliance. Extensive evaluations on a real-world testbed demonstrate the effectiveness of our approach. It achieves an effective throughput increase of up to 10x compared to the baselines and shows better robustness in challenging scenarios. OCTOPINF can be used for any DNN-based EVA inference task with minimal adaptation and is available at https://github.com/tungngreen/PipelineScheduler.

cs.DC↗

arXiv2025

MEDSAGE: Enhancing Robustness of Medical Dialogue Summarization to ASR Errors with LLM-generated Synthetic Dialogues

Automatic Speech Recognition (ASR) systems are pivotal in transcribing speech into text, yet the errors they introduce can significantly degrade the performance of downstream tasks like summarization. This issue is particularly pronounced in clinical dialogue summarization, a low-resource domain where supervised data for fine-tuning is scarce, necessitating the use of ASR models as black-box solutions. Employing conventional data augmentation for enhancing the noise robustness of summarization models is not feasible either due to the unavailability of sufficient medical dialogue audio recordings and corresponding ASR transcripts. To address this challenge, we propose MEDSAGE, an approach for generating synthetic samples for data augmentation using Large Language Models (LLMs). Specifically, we leverage the in-context learning capabilities of LLMs and instruct them to generate ASR-like errors based on a few available medical dialogue examples with audio recordings. Experimental results show that LLMs can effectively model ASR noise, and incorporating this noisy data into the training process significantly improves the robustness and accuracy of medical dialogue summarization systems. This approach addresses the challenges of noisy ASR outputs in critical applications, offering a robust solution to enhance the reliability of clinical dialogue summarization.

cs.CL↗

arXiv2024

Representation Learning of Structured Data for Medical Foundation Models

Large Language Models (LLMs) have demonstrated remarkable performance across various domains, including healthcare. However, their ability to effectively represent structured non-textual data, such as the alphanumeric medical codes used in records like ICD-10 or SNOMED-CT, is limited and has been particularly exposed in recent research. This paper examines the challenges LLMs face in processing medical codes due to the shortcomings of current tokenization methods. As a result, we introduce the UniStruct architecture to design a multimodal medical foundation model of unstructured text and structured data, which addresses these challenges by adapting subword tokenization techniques specifically for the structured medical codes. Our approach is validated through model pre-training on both an extensive internal medical database and a public repository of structured medical records. Trained on over 1 billion tokens on the internal medical database, the proposed model achieves up to a 23% improvement in evaluation metrics, with around 2% gain attributed to our proposed tokenization. Additionally, when evaluated on the EHRSHOT public benchmark with a 1/1000 fraction of the pre-training data, the UniStruct model improves performance on over 42% of the downstream tasks. Our approach not only enhances the representation and generalization capabilities of patient-centric models but also bridges a critical gap in representation learning models' ability to handle complex structured medical data, alongside unstructured text.

cs.CL↗

arXiv2024

MetaWeather: Few-Shot Weather-Degraded Image Restoration

Real-world weather conditions are intricate and often occur concurrently. However, most existing restoration approaches are limited in their applicability to specific weather conditions in training data and struggle to generalize to unseen weather types, including real-world weather conditions. To address this issue, we introduce MetaWeather, a universal approach that can handle diverse and novel weather conditions with a single unified model. Extending a powerful meta-learning framework, MetaWeather formulates the task of weather-degraded image restoration as a few-shot adaptation problem that predicts the degradation pattern of a query image, and learns to adapt to unseen weather conditions through a novel spatial-channel matching algorithm. Experimental results on the BID Task II.A, SPA-Data, and RealSnow datasets demonstrate that the proposed method can adapt to unseen weather conditions, significantly outperforming the state-of-the-art multi-weather image restoration methods.

cs.CV↗

arXiv2024

M-QALM: A Benchmark to Assess Clinical Reading Comprehension and Knowledge Recall in Large Language Models via Question Answering

There is vivid research on adapting Large Language Models (LLMs) to perform a variety of tasks in high-stakes domains such as healthcare. Despite their popularity, there is a lack of understanding of the extent and contributing factors that allow LLMs to recall relevant knowledge and combine it with presented information in the clinical and biomedical domain: a fundamental pre-requisite for success on down-stream tasks. Addressing this gap, we use Multiple Choice and Abstractive Question Answering to conduct a large-scale empirical study on 22 datasets in three generalist and three specialist biomedical sub-domains. Our multifaceted analysis of the performance of 15 LLMs, further broken down by sub-domain, source of knowledge and model architecture, uncovers success factors such as instruction tuning that lead to improved recall and comprehension. We further show that while recently proposed domain-adapted models may lack adequate knowledge, directly fine-tuning on our collected medical knowledge datasets shows encouraging results, even generalising to unseen specialist sub-domains. We complement the quantitative results with a skill-oriented manual error analysis, which reveals a significant gap between the models' capabilities to simply recall necessary knowledge and to integrate it with the presented context. To foster research and collaboration in this field we share M-QALM, our resources, standardised methodology, and evaluation results, with the research community to facilitate further advancements in clinical knowledge representation learning within language models.

cs.CL↗

arXiv2024

A Comprehensive Survey of Sentence Representations: From the BERT Epoch to the ChatGPT Era and Beyond

Sentence representations are a critical component in NLP applications such as retrieval, question answering, and text classification. They capture the meaning of a sentence, enabling machines to understand and reason over human language. In recent years, significant progress has been made in developing methods for learning sentence representations, including unsupervised, supervised, and transfer learning approaches. However there is no literature review on sentence representations till now. In this paper, we provide an overview of the different methods for sentence representation learning, focusing mostly on deep learning models. We provide a systematic organization of the literature, highlighting the key contributions and challenges in this area. Overall, our review highlights the importance of this area in natural language processing, the progress made in sentence representation learning, and the challenges that remain. We conclude with directions for future research, suggesting potential avenues for improving the quality and efficiency of sentence representations.

cs.CL↗

arXiv2023

Automated Clinical Coding for Outpatient Departments

Computerised clinical coding approaches aim to automate the process of assigning a set of codes to medical records. While there is active research pushing the state of the art on clinical coding for hospitalized patients, the outpatient setting -- where doctors tend to non-hospitalised patients -- is overlooked. Although both settings can be formalised as a multi-label classification task, they present unique and distinct challenges, which raises the question of whether the success of inpatient clinical coding approaches translates to the outpatient setting. This paper is the first to investigate how well state-of-the-art deep learning-based clinical coding approaches work in the outpatient setting at hospital scale. To this end, we collect a large outpatient dataset comprising over 7 million notes documenting over half a million patients. We adapt four state-of-the-art clinical coding approaches to this setting and evaluate their potential to assist coders. We find evidence that clinical coding in outpatient settings can benefit from more innovations in popular inpatient coding benchmarks. A deeper analysis of the factors contributing to the success -- amount and form of data and choice of document representation -- reveals the presence of easy-to-solve examples, the coding of which can be completely automated with a low error rate.

cs.CL↗

arXiv2023

PULSAR at MEDIQA-Sum 2023: Large Language Models Augmented by Synthetic Dialogue Convert Patient Dialogues to Medical Records

This paper describes PULSAR, our system submission at the ImageClef 2023 MediQA-Sum task on summarising patient-doctor dialogues into clinical records. The proposed framework relies on domain-specific pre-training, to produce a specialised language model which is trained on task-specific natural data augmented by synthetic data generated by a black-box LLM. We find limited evidence towards the efficacy of domain-specific pre-training and data augmentation, while scaling up the language model yields the best performance gains. Our approach was ranked second and third among 13 submissions on task B of the challenge. Our code is available at https://github.com/yuping-wu/PULSAR.

cs.CL↗

arXiv2023

PULSAR: Pre-training with Extracted Healthcare Terms for Summarising Patients' Problems and Data Augmentation with Black-box Large Language Models

Medical progress notes play a crucial role in documenting a patient's hospital journey, including his or her condition, treatment plan, and any updates for healthcare providers. Automatic summarisation of a patient's problems in the form of a problem list can aid stakeholders in understanding a patient's condition, reducing workload and cognitive bias. BioNLP 2023 Shared Task 1A focuses on generating a list of diagnoses and problems from the provider's progress notes during hospitalisation. In this paper, we introduce our proposed approach to this task, which integrates two complementary components. One component employs large language models (LLMs) for data augmentation; the other is an abstractive summarisation LLM with a novel pre-training objective for generating the patients' problems summarised as a list. Our approach was ranked second among all submissions to the shared task. The performance of our model on the development and test datasets shows that our approach is more robust on unknown data, with an improvement of up to 3.1 points over the same size of the larger model.

cs.CL↗

arXiv2023

A Two-Stage Decoder for Efficient ICD Coding

Clinical notes in healthcare facilities are tagged with the International Classification of Diseases (ICD) code; a list of classification codes for medical diagnoses and procedures. ICD coding is a challenging multilabel text classification problem due to noisy clinical document inputs and long-tailed label distribution. Recent automated ICD coding efforts improve performance by encoding medical notes and codes with additional data and knowledge bases. However, most of them do not reflect how human coders generate the code: first, the coders select general code categories and then look for specific subcategories that are relevant to a patient's condition. Inspired by this, we propose a two-stage decoding mechanism to predict ICD codes. Our model uses the hierarchical properties of the codes to split the prediction into two steps: At first, we predict the parent code and then predict the child code based on the previous prediction. Experiments on the public MIMIC-III data set show that our model performs well in single-model settings without external data or knowledge.

cs.CL↗

arXiv2023

Mimic-IV-ICD: A new benchmark for eXtreme MultiLabel Classification

Clinical notes are assigned ICD codes - sets of codes for diagnoses and procedures. In the recent years, predictive machine learning models have been built for automatic ICD coding. However, there is a lack of widely accepted benchmarks for automated ICD coding models based on large-scale public EHR data. This paper proposes a public benchmark suite for ICD-10 coding using a large EHR dataset derived from MIMIC-IV, the most recent public EHR dataset. We implement and compare several popular methods for ICD coding prediction tasks to standardize data preprocessing and establish a comprehensive ICD coding benchmark dataset. This approach fosters reproducibility and model comparison, accelerating progress toward employing automated ICD coding in future studies. Furthermore, we create a new ICD-9 benchmark using MIMIC-IV data, providing more data points and a higher number of ICD codes than MIMIC-III. Our open-source code offers easy access to data processing steps, benchmark creation, and experiment replication for those with MIMIC-IV access, providing insights, guidance, and protocols to efficiently develop ICD coding models.

cs.AI↗

arXiv2021

A Conditional Splitting Framework for Efficient Constituency Parsing

We introduce a generic seq2seq parsing framework that casts constituency parsing problems (syntactic and discourse parsing) into a series of conditional splitting decisions. Our parsing model estimates the conditional probability distribution of possible splitting points in a given text span and supports efficient top-down decoding, which is linear in number of nodes. The conditional splitting formulation together with efficient beam search inference facilitate structural consistency without relying on expensive structured inference. Crucially, for discourse analysis we show that in our formulation, discourse segmentation can be framed as a special case of parsing which allows us to perform discourse parsing without requiring segmentation as a pre-requisite. Experiments show that our model achieves good results on the standard syntactic parsing tasks under settings with/without pre-trained representations and rivals state-of-the-art (SoTA) methods that are more computationally expensive than ours. In discourse parsing, our method outperforms SoTA by a good margin.

cs.CL↗

arXiv2021

Cross-model Back-translated Distillation for Unsupervised Machine Translation

Recent unsupervised machine translation (UMT) systems usually employ three main principles: initialization, language modeling and iterative back-translation, though they may apply them differently. Crucially, iterative back-translation and denoising auto-encoding for language modeling provide data diversity to train the UMT systems. However, the gains from these diversification processes has seemed to plateau. We introduce a novel component to the standard UMT framework called Cross-model Back-translated Distillation (CBD), that is aimed to induce another level of data diversification that existing principles lack. CBD is applicable to all previous UMT approaches. In our experiments, CBD achieves the state of the art in the WMT'14 English-French, WMT'16 English-German and English-Romanian bilingual unsupervised translation tasks, with 38.2, 30.1, and 36.3 BLEU respectively. It also yields 1.5-3.3 BLEU improvements in IWSLT English-French and English-German tasks. Through extensive experimental analyses, we show that CBD is effective because it embraces data diversity while other similar variants do not.

cs.CL↗

arXiv2021

RST Parsing from Scratch

We introduce a novel top-down end-to-end formulation of document-level discourse parsing in the Rhetorical Structure Theory (RST) framework. In this formulation, we consider discourse parsing as a sequence of splitting decisions at token boundaries and use a seq2seq network to model the splitting decisions. Our framework facilitates discourse parsing from scratch without requiring discourse segmentation as a prerequisite; rather, it yields segmentation as part of the parsing process. Our unified parsing model adopts a beam search to decode the best tree structure by searching through a space of high-scoring trees. With extensive experiments on the standard English RST discourse treebank, we demonstrate that our parser outperforms existing methods by a good margin in both end-to-end parsing and parsing with gold segmentation. More importantly, it does so without using any handcrafted features, making it faster and easily adaptable to new languages and domains.

cs.CL↗

arXiv2020

Efficient Constituency Parsing by Pointing

We propose a novel constituency parsing model that casts the parsing problem into a series of pointing tasks. Specifically, our model estimates the likelihood of a span being a legitimate tree constituent via the pointing score corresponding to the boundary words of the span. Our parsing model supports efficient top-down decoding and our learning objective is able to enforce structural consistency without resorting to the expensive CKY inference. The experiments on the standard English Penn Treebank parsing task show that our method achieves 92.78 F1 without using pre-trained models, which is higher than all the existing methods with similar time complexity. Using pre-trained BERT, our model achieves 95.48 F1, which is competitive with the state-of-the-art while being faster. Our approach also establishes new state-of-the-art in Basque and Swedish in the SPMRL shared tasks on multilingual constituency parsing.

cs.CL↗