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Theofanis Karaletsos

Publications and source records attributed to Theofanis Karaletsos.

40 records · Page 3Linked to original sources

Bayesian representation learning with oracle constraints

Representation learning systems typically rely on massive amounts of labeled data in order to be trained to high accuracy. Recently, high-dimensional parametric models like neural networks have succeeded in building rich representations using either compressive, reconstructive or supervised criteria. However, the semantic structure inherent in observations is oftentimes lost in the process. Human perception excels at understanding semantics but cannot always be expressed in terms of labels. Thus, \emph{oracles} or \emph{human-in-the-loop systems}, for example crowdsourcing, are often employed to generate similarity constraints using an implicit similarity function encoded in human perception. In this work we propose to combine \emph{generative unsupervised feature learning} with a \emph{probabilistic treatment of oracle information like triplets} in order to transfer implicit privileged oracle knowledge into explicit nonlinear Bayesian latent factor models of the observations. We use a fast variational algorithm to learn the joint model and demonstrate applicability to a well-known image dataset. We show how implicit triplet information can provide rich information to learn representations that outperform previous metric learning approaches as well as generative models without this side-information in a variety of predictive tasks. In addition, we illustrate that the proposed approach compartmentalizes the latent spaces semantically which allows interpretation of the latent variables.

stat.ML↗

Knowledge Transfer with Medical Language Embeddings

Identifying relationships between concepts is a key aspect of scientific knowledge synthesis. Finding these links often requires a researcher to laboriously search through scien- tific papers and databases, as the size of these resources grows ever larger. In this paper we describe how distributional semantics can be used to unify structured knowledge graphs with unstructured text to predict new relationships between medical concepts, using a probabilistic generative model. Our approach is also designed to ameliorate data sparsity and scarcity issues in the medical domain, which make language modelling more challenging. Specifically, we integrate the medical relational database (SemMedDB) with text from electronic health records (EHRs) to perform knowledge graph completion. We further demonstrate the ability of our model to predict relationships between tokens not appearing in the relational database.

cs.CL↗

A Generative Model of Words and Relationships from Multiple Sources

Neural language models are a powerful tool to embed words into semantic vector spaces. However, learning such models generally relies on the availability of abundant and diverse training examples. In highly specialised domains this requirement may not be met due to difficulties in obtaining a large corpus, or the limited range of expression in average use. Such domains may encode prior knowledge about entities in a knowledge base or ontology. We propose a generative model which integrates evidence from diverse data sources, enabling the sharing of semantic information. We achieve this by generalising the concept of co-occurrence from distributional semantics to include other relationships between entities or words, which we model as affine transformations on the embedding space. We demonstrate the effectiveness of this approach by outperforming recent models on a link prediction task and demonstrating its ability to profit from partially or fully unobserved data training labels. We further demonstrate the usefulness of learning from different data sources with overlapping vocabularies.

cs.CL↗

Automatic Relevance Determination For Deep Generative Models

A recurring problem when building probabilistic latent variable models is regularization and model selection, for instance, the choice of the dimensionality of the latent space. In the context of belief networks with latent variables, this problem has been adressed with Automatic Relevance Determination (ARD) employing Monte Carlo inference. We present a variational inference approach to ARD for Deep Generative Models using doubly stochastic variational inference to provide fast and scalable learning. We show empirical results on a standard dataset illustrating the effects of contracting the latent space automatically. We show that the resulting latent representations are significantly more compact without loss of expressive power of the learned models.

stat.ML↗