arXiv subjects
Publications and source records attributed to Thierry Cachat.
The classical attenuation regulation of gene expression in bacteria is considered. We propose to represent the secondary RNA structure in the leader region of a gene or an operon by a term, and we give a probabilistic term rewriting system modeling the whole process of such a regulation.
We prove an n-EXPTIME lower bound for the problem of deciding the winner in a reachability game on Higher Order Pushdown Automata (HPDA) of level n. This bound matches the known upper bound for parity games on HPDA. As a consequence the mu-calculus model checking over graphs given by n-HPDA is n-EXPTIME complete.
Ordinal automata are used to model physical systems with Zeno behavior. Using automata and games techniques we solve a control problem formulated and left open by Demri and Nowak in 2005. It involves partial observability and a new synchronization between the controller and the environment.
We give a new simple proof of the decidability of the First Order Theory of (omega^omega^i,+) and the Monadic Second Order Theory of (omega^i,<), improving the complexity in both cases. Our algorithm is based on tree automata and a new representation of (sets of) ordinals by (infinite) trees.