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Thomas C. M. Lee

Publications and source records attributed to Thomas C. M. Lee.

At least 19 recordsLinked to original sources

Low-Rank Single-Index Bandits with Unknown Links: From Matrices to Tensors

Low-rank matrix and tensor bandits exploit structured interactions but typically assume a known reward link. Recent single-index bandit methods accommodate unknown links without directly exploiting matrix or tensor rank. We address this gap by studying stochastic matrix and tensor bandits with an unknown shared Lipschitz link and a low-rank index parameter under known regular candidate distributions and finite-variance noise. For monotone links, T-ESTOR combines robust, rank-adaptive Stein estimation with epoch-based greedy selection. Under exact selected-score access and a uniformly positive selected-design Stein signal, it achieves square-root regret with dimension dependence determined by the low-rank structure. For every admissible design, the monotone lower bound matches the rank, dimension, and horizon dependence up to logarithmic factors at large horizons, for fixed menu size and model/design constants. For nonmonotone links under a nonzero base-law Stein signal, T-BSTOR combines structured estimation with robust bin-based learning and attains the optimal $\widetilde{O}(T^{2/3})$ horizon rate for fixed dimensions, menu size, and model/design constants. Synthetic and CCLE-based experiments illustrate the benefits of structured estimation relative to vectorized and competing single-index baseline methods.

cs.LG↗

Lipschitz Bandits with Stochastic Delayed Feedback

The Lipschitz bandit problem extends stochastic bandits to a continuous action set defined over a metric space, where the expected reward function satisfies a Lipschitz condition. In this work, we introduce a new problem of Lipschitz bandit in the presence of stochastic delayed feedback, where the rewards are not observed immediately but after a random delay. We consider both bounded and unbounded stochastic delays, and design algorithms that attain sublinear regret guarantees in each setting. For bounded delays, we propose a delay-aware zooming algorithm that retains the optimal performance of the delay-free setting up to an additional term that scales with the maximal delay $τ_{\max}$. For unbounded delays, we propose a novel phased learning strategy that accumulates reliable feedback over carefully scheduled intervals, and establish a regret lower bound showing that our method is nearly optimal up to logarithmic factors. Finally, we present experimental results to demonstrate the efficiency of our algorithms under various delay scenarios.

cs.LG↗

AutoGFI: Streamlined Generalized Fiducial Inference for Modern Inference Problems in Models with Additive Errors

The concept of fiducial inference was introduced by R. A. Fisher in the 1930s to address the perceived limitations of Bayesian inference, particularly the need for subjective prior distributions in cases with limited prior information. However, Fisher's fiducial approach lost favor due to complications, especially in multi-parameter problems. With renewed interest in fiducial inference in the 2000s, generalized fiducial inference (GFI) emerged as a promising extension of Fisher's ideas, offering new solutions for complex inference challenges. Despite its potential, GFI's adoption has been hindered by demanding mathematical derivations and complex implementation requirements, such as Markov Chain Monte Carlo (MCMC) algorithms. This paper introduces AutoGFI, a streamlined variant of GFI designed to simplify its application across various inference problems with additive noise. AutoGFI's accessibility lies in its simplicity-requiring only a fitting routine-making it a feasible option for a wider range of researchers and practitioners. To demonstrate its efficacy, AutoGFI is applied to three challenging problems: tensor regression, matrix completion, and network cohesion regression. These case studies showcase AutoGFI's competitive performance against specialized solutions, highlighting its potential to broaden the application of GFI in practical domains, ultimately enriching the statistical inference toolkit.

stat.ME↗

Change Point Detection in Pairwise Comparison Data with Covariates

This paper introduces the novel piecewise stationary covariate-assisted ranking estimation (PS-CARE) model for analyzing time-evolving pairwise comparison data, enhancing item ranking accuracy through the integration of covariate information. By partitioning the data into distinct, stationary segments, the PS-CARE model adeptly detects temporal shifts in item rankings, known as change points, whose number and positions are initially unknown. Leveraging the minimum description length (MDL) principle, this paper establishes a statistically consistent model selection criterion to estimate these unknowns. The practical optimization of this MDL criterion is done with the pruned exact linear time (PELT) algorithm. Empirical evaluations reveal the method's promising performance in accurately locating change points across various simulated scenarios. An application to an NBA dataset yielded meaningful insights that aligned with significant historical events, highlighting the method's practical utility and the MDL criterion's effectiveness in capturing temporal ranking changes. To the best of the authors' knowledge, this research pioneers change point detection in pairwise comparison data with covariate information, representing a significant leap forward in the field of dynamic ranking analysis.

stat.AP↗

Improving Lung Cancer Diagnosis and Survival Prediction with Deep Learning and CT Imaging

Lung cancer is a major cause of cancer-related deaths, and early diagnosis and treatment are crucial for improving patients' survival outcomes. In this paper, we propose to employ convolutional neural networks to model the non-linear relationship between the risk of lung cancer and the lungs' morphology revealed in the CT images. We apply a mini-batched loss that extends the Cox proportional hazards model to handle the non-convexity induced by neural networks, which also enables the training of large data sets. Additionally, we propose to combine mini-batched loss and binary cross-entropy to predict both lung cancer occurrence and the risk of mortality. Simulation results demonstrate the effectiveness of both the mini-batched loss with and without the censoring mechanism, as well as its combination with binary cross-entropy. We evaluate our approach on the National Lung Screening Trial data set with several 3D convolutional neural network architectures, achieving high AUC and C-index scores for lung cancer classification and survival prediction. These results, obtained from simulations and real data experiments, highlight the potential of our approach to improving the diagnosis and treatment of lung cancer.

eess.IV↗

Low-rank Matrix Bandits with Heavy-tailed Rewards

In stochastic low-rank matrix bandit, the expected reward of an arm is equal to the inner product between its feature matrix and some unknown $d_1$ by $d_2$ low-rank parameter matrix $Θ^*$ with rank $r \ll d_1\wedge d_2$. While all prior studies assume the payoffs are mixed with sub-Gaussian noises, in this work we loosen this strict assumption and consider the new problem of \underline{low}-rank matrix bandit with \underline{h}eavy-\underline{t}ailed \underline{r}ewards (LowHTR), where the rewards only have finite $(1+δ)$ moment for some $δ\in (0,1]$. By utilizing the truncation on observed payoffs and the dynamic exploration, we propose a novel algorithm called LOTUS attaining the regret bound of order $\tilde O(d^\frac{3}{2}r^\frac{1}{2}T^\frac{1}{1+δ}/\tilde{D}_{rr})$ without knowing $T$, which matches the state-of-the-art regret bound under sub-Gaussian noises~\citep{lu2021low,kang2022efficient} with $δ= 1$. Moreover, we establish a lower bound of the order $Ω(d^\fracδ{1+δ} r^\fracδ{1+δ} T^\frac{1}{1+δ}) = Ω(T^\frac{1}{1+δ})$ for LowHTR, which indicates our LOTUS is nearly optimal in the order of $T$. In addition, we improve LOTUS so that it does not require knowledge of the rank $r$ with $\tilde O(dr^\frac{3}{2}T^\frac{1+δ}{1+2δ})$ regret bound, and it is efficient under the high-dimensional scenario. We also conduct simulations to demonstrate the practical superiority of our algorithm.

stat.ML↗

Online Continuous Hyperparameter Optimization for Generalized Linear Contextual Bandits

In stochastic contextual bandits, an agent sequentially makes actions from a time-dependent action set based on past experience to minimize the cumulative regret. Like many other machine learning algorithms, the performance of bandits heavily depends on the values of hyperparameters, and theoretically derived parameter values may lead to unsatisfactory results in practice. Moreover, it is infeasible to use offline tuning methods like cross-validation to choose hyperparameters under the bandit environment, as the decisions should be made in real-time. To address this challenge, we propose the first online continuous hyperparameter tuning framework for contextual bandits to learn the optimal parameter configuration in practice within a search space on the fly. Specifically, we use a double-layer bandit framework named CDT (Continuous Dynamic Tuning) and formulate the hyperparameter optimization as a non-stationary continuum-armed bandit, where each arm represents a combination of hyperparameters, and the corresponding reward is the algorithmic result. For the top layer, we propose the Zooming TS algorithm that utilizes Thompson Sampling (TS) for exploration and a restart technique to get around the \textit{switching} environment. The proposed CDT framework can be easily utilized to tune contextual bandit algorithms without any pre-specified candidate set for multiple hyperparameters. We further show that it could achieve a sublinear regret in theory and performs consistently better than all existing methods on both synthetic and real datasets.

cs.LG↗

Adversarial Examples Detection with Bayesian Neural Network

In this paper, we propose a new framework to detect adversarial examples motivated by the observations that random components can improve the smoothness of predictors and make it easier to simulate the output distribution of a deep neural network. With these observations, we propose a novel Bayesian adversarial example detector, short for BATer, to improve the performance of adversarial example detection. Specifically, we study the distributional difference of hidden layer output between natural and adversarial examples, and propose to use the randomness of the Bayesian neural network to simulate hidden layer output distribution and leverage the distribution dispersion to detect adversarial examples. The advantage of a Bayesian neural network is that the output is stochastic while a deep neural network without random components does not have such characteristics. Empirical results on several benchmark datasets against popular attacks show that the proposed BATer outperforms the state-of-the-art detectors in adversarial example detection.

stat.ML↗

Efficient Frameworks for Generalized Low-Rank Matrix Bandit Problems

In the stochastic contextual low-rank matrix bandit problem, the expected reward of an action is given by the inner product between the action's feature matrix and some fixed, but initially unknown $d_1$ by $d_2$ matrix $Θ^*$ with rank $r \ll \{d_1, d_2\}$, and an agent sequentially takes actions based on past experience to maximize the cumulative reward. In this paper, we study the generalized low-rank matrix bandit problem, which has been recently proposed in \cite{lu2021low} under the Generalized Linear Model (GLM) framework. To overcome the computational infeasibility and theoretical restrain of existing algorithms on this problem, we first propose the G-ESTT framework that modifies the idea from \cite{jun2019bilinear} by using Stein's method on the subspace estimation and then leverage the estimated subspaces via a regularization idea. Furthermore, we remarkably improve the efficiency of G-ESTT by using a novel exclusion idea on the estimated subspace instead, and propose the G-ESTS framework. We also show that G-ESTT can achieve the $\tilde{O}(\sqrt{(d_1+d_2)MrT})$ bound of regret while G-ESTS can achineve the $\tilde{O}(\sqrt{(d_1+d_2)^{3/2}Mr^{3/2}T})$ bound of regret under mild assumption up to logarithm terms, where $M$ is some problem dependent value. Under a reasonable assumption that $M = O((d_1+d_2)^2)$ in our problem setting, the regret of G-ESTT is consistent with the current best regret of $\tilde{O}((d_1+d_2)^{3/2} \sqrt{rT}/D_{rr})$~\citep{lu2021low} ($D_{rr}$ will be defined later). For completeness, we conduct experiments to illustrate that our proposed algorithms, especially G-ESTS, are also computationally tractable and consistently outperform other state-of-the-art (generalized) linear matrix bandit methods based on a suite of simulations.

stat.ML↗

Robust Lipschitz Bandits to Adversarial Corruptions

Lipschitz bandit is a variant of stochastic bandits that deals with a continuous arm set defined on a metric space, where the reward function is subject to a Lipschitz constraint. In this paper, we introduce a new problem of Lipschitz bandits in the presence of adversarial corruptions where an adaptive adversary corrupts the stochastic rewards up to a total budget $C$. The budget is measured by the sum of corruption levels across the time horizon $T$. We consider both weak and strong adversaries, where the weak adversary is unaware of the current action before the attack, while the strong one can observe it. Our work presents the first line of robust Lipschitz bandit algorithms that can achieve sub-linear regret under both types of adversary, even when the total budget of corruption $C$ is unrevealed to the agent. We provide a lower bound under each type of adversary, and show that our algorithm is optimal under the strong case. Finally, we conduct experiments to illustrate the effectiveness of our algorithms against two classic kinds of attacks.

cs.LG↗

Identifying diffuse spatial structures in high-energy photon lists

Data from high-energy observations are usually obtained as lists of photon events. A common analysis task for such data is to identify whether diffuse emission exists, and to estimate its surface brightness, even in the presence of point sources that may be superposed. We have developed a novel non-parametric event list segmentation algorithm to divide up the field of view into distinct emission components. We use photon location data directly, without binning them into an image. We first construct a graph from the Voronoi tessellation of the observed photon locations and then grow segments using a new adaptation of seeded region growing, that we call Seeded Region Growing on Graph, after which the overall method is named SRGonG. Starting with a set of seed locations, this results in an over-segmented dataset, which SRGonG then coalesces using a greedy algorithm where adjacent segments are merged to minimize a model comparison statistic; we use the Bayesian Information Criterion. Using SRGonG we are able to identify point-like and diffuse extended sources in the data with equal facility. We validate SRGonG using simulations, demonstrating that it is capable of discerning irregularly shaped low surface-brightness emission structures as well as point-like sources with strengths comparable to that seen in typical X-ray data. We demonstrate SRGonG's use on the Chandra data of the Antennae galaxies, and show that it segments the complex structures appropriately.

astro-ph.IM↗

Syndicated Bandits: A Framework for Auto Tuning Hyper-parameters in Contextual Bandit Algorithms

The stochastic contextual bandit problem, which models the trade-off between exploration and exploitation, has many real applications, including recommender systems, online advertising and clinical trials. As many other machine learning algorithms, contextual bandit algorithms often have one or more hyper-parameters. As an example, in most optimal stochastic contextual bandit algorithms, there is an unknown exploration parameter which controls the trade-off between exploration and exploitation. A proper choice of the hyper-parameters is essential for contextual bandit algorithms to perform well. However, it is infeasible to use offline tuning methods to select hyper-parameters in contextual bandit environment since there is no pre-collected dataset and the decisions have to be made in real time. To tackle this problem, we first propose a two-layer bandit structure for auto tuning the exploration parameter and further generalize it to the Syndicated Bandits framework which can learn multiple hyper-parameters dynamically in contextual bandit environment. We derive the regret bounds of our proposed Syndicated Bandits framework and show it can avoid its regret dependent exponentially in the number of hyper-parameters to be tuned. Moreover, it achieves optimal regret bounds under certain scenarios. Syndicated Bandits framework is general enough to handle the tuning tasks in many popular contextual bandit algorithms, such as LinUCB, LinTS, UCB-GLM, etc. Experiments on both synthetic and real datasets validate the effectiveness of our proposed framework.

stat.ML↗

Extending the Use of MDL for High-Dimensional Problems: Variable Selection, Robust Fitting, and Additive Modeling

In the signal processing and statistics literature, the minimum description length (MDL) principle is a popular tool for choosing model complexity. Successful examples include signal denoising and variable selection in linear regression, for which the corresponding MDL solutions often enjoy consistent properties and produce very promising empirical results. This paper demonstrates that MDL can be extended naturally to the high-dimensional setting, where the number of predictors $p$ is larger than the number of observations $n$. It first considers the case of linear regression, then allows for outliers in the data, and lastly extends to the robust fitting of nonparametric additive models. Results from numerical experiments are presented to demonstrate the efficiency and effectiveness of the MDL approach.

eess.SP↗

A Review of Adversarial Attack and Defense for Classification Methods

Despite the efficiency and scalability of machine learning systems, recent studies have demonstrated that many classification methods, especially deep neural networks (DNNs), are vulnerable to adversarial examples; i.e., examples that are carefully crafted to fool a well-trained classification model while being indistinguishable from natural data to human. This makes it potentially unsafe to apply DNNs or related methods in security-critical areas. Since this issue was first identified by Biggio et al. (2013) and Szegedy et al.(2014), much work has been done in this field, including the development of attack methods to generate adversarial examples and the construction of defense techniques to guard against such examples. This paper aims to introduce this topic and its latest developments to the statistical community, primarily focusing on the generation and guarding of adversarial examples. Computing codes (in python and R) used in the numerical experiments are publicly available for readers to explore the surveyed methods. It is the hope of the authors that this paper will encourage more statisticians to work on this important and exciting field of generating and defending against adversarial examples.

cs.CR↗

Estimating Fiber Orientation Distribution through Blockwise Adaptive Thresholding with Application to HCP Young Adults Data

Due to recent technological advances, large brain imaging data sets can now be collected. Such data are highly complex so extraction of meaningful information from them remains challenging. Thus, there is an urgent need for statistical procedures that are computationally scalable and can provide accurate estimates that capture the neuronal structures and their functionalities. We propose a fast method for estimating the fiber orientation distribution(FOD) based on diffusion MRI data. This method models the observed dMRI signal at any voxel as a convolved and noisy version of the underlying FOD, and utilizes the spherical harmonics basis for representing the FOD, where the spherical harmonic coefficients are adaptively and nonlinearly shrunk by using a James-Stein type estimator. To further improve the estimation accuracy by enhancing the localized peaks of the FOD, as a second step a super-resolution sharpening process is then applied. The resulting estimated FODs can be fed to a fiber tracking algorithm to reconstruct the white matter fiber tracts. We illustrate the overall methodology using both synthetic data and data from the Human Connectome Project.

stat.AP↗

Change point detection and image segmentation for time series of astrophysical images

Many astrophysical phenomena are time-varying, in the sense that their intensity, energy spectrum, and/or the spatial distribution of the emission suddenly change. This paper develops a method for modeling a time series of images. Under the assumption that the arrival times of the photons follow a Poisson process, the data are binned into 4D grids of voxels (time, energy band, and x-y coordinates), and viewed as a time series of non-homogeneous Poisson images. The method assumes that at each time point, the corresponding multi-band image stack is an unknown 3D piecewise constant function including Poisson noise. It also assumes that all image stacks between any two adjacent change points (in time domain) share the same unknown piecewise constant function. The proposed method is designed to estimate the number and the locations of all the change points (in time domain), as well as all the unknown piecewise constant functions between any pairs of the change points. The method applies the minimum description length (MDL) principle to perform this task. A practical algorithm is also developed to solve the corresponding complicated optimization problem. Simulation experiments and applications to real datasets show that the proposed method enjoys very promising empirical properties. Applications to two real datasets, the XMM observation of a flaring star and an emerging solar coronal loop, illustrate the usage of the proposed method and the scientific insight gained from it.

astro-ph.IM↗

Simultaneous Detection of Multiple Change Points and Community Structures in Time Series of Networks

In many complex systems, networks and graphs arise in a natural manner. Often, time evolving behavior can be easily found and modeled using time-series methodology. Amongst others, two common research problems in network analysis are community detection and change-point detection. Community detection aims at finding specific sub-structures within the networks, and change-point detection tries to find the time points at which sub-structures change. We propose a novel methodology to detect both community structures and change points simultaneously based on a model selection framework in which the Minimum Description Length Principle (MDL) is utilized as minimizing objective criterion. The promising practical performance of the proposed method is illustrated via a series of numerical experiments and real data analysis.

cs.SI↗

Uncertainty Quantification in Ensembles of Honest Regression Trees using Generalized Fiducial Inference

Due to their accuracies, methods based on ensembles of regression trees are a popular approach for making predictions. Some common examples include Bayesian additive regression trees, boosting and random forests. This paper focuses on honest random forests, which add honesty to the original form of random forests and are proved to have better statistical properties. The main contribution is a new method that quantifies the uncertainties of the estimates and predictions produced by honest random forests. The proposed method is based on the generalized fiducial methodology, and provides a fiducial density function that measures how likely each single honest tree is the true model. With such a density function, estimates and predictions, as well as their confidence/prediction intervals, can be obtained. The promising empirical properties of the proposed method are demonstrated by numerical comparisons with several state-of-the-art methods, and by applications to a few real data sets. Lastly, the proposed method is theoretically backed up by a strong asymptotic guarantee.

stat.ME↗