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Thomas H. Scheike

Publications and source records attributed to Thomas H. Scheike.

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The Ghosh-Lin and Fine-Gray models for a mix of administrative and random censoring

Recurrent events or competing risks regression models are often applied in the bio-medical setting and both can be considered as marginal models. In presence of right-censoring, such models need to be adjusted to give consistent estimators. When censoring is administrative, marginal regression models are particularly easy to estimate. However, when censoring is instead acting randomly, inverse probability of censoring weighting (IPCW) adjustments are typically considered to obtain parameter estimates. This technique relies on a censoring-weights adjustment via a correct censoring model, but for administrative censoring the adjustment is done correctly simply by modifying the risk-set. In practice for large central registries or some clinical trials, the administrative censoring time will be known for all subjects, but there will typically also be a proportion of subjects that are censored at random. In this work, we consider two frequently used regression approaches, the Ghosh-Lin model for recurrent events with terminal events and the Fine-Gray model for competing events. For these two settings, when both administrative and random censoring are present, we demonstrate how to obtain correct estimation by dealing with the combination of the two different types of censoring relying on a minimum of modeling assumptions.

stat.ME

Non-Smooth Backfitting for Excess Risk Additive Regression Model with Two Survival Time-Scales

We present a new backfitting algorithm estimating the complex structured non-parametric survival model of Scheike (2001) without having to use smoothing. The considered model is a non-parametric survival model with two time-scales that are equivalent up to a constant that varies over the subjects. Covariate effects are modelled linearly on each time scale by additive Aalen models. Estimators of the cumulative intensities on the two time-scales are suggested by solving local estimating equations jointly on the two time-scales. We are able to estimate the cumulative intensities solving backfitting estimating equations without using smoothing methods and we provide large sample properties and simultaneous confidence bands. The model is applied to data on myocardial infarction providing a separation of the two effects stemming from time since diagnosis and age.

stat.ME

Wild Bootstrap based Confidence Bands for Multiplicative Hazards Models

We propose new resampling-based approaches to construct asymptotically valid time simultaneous confidence bands for cumulative hazard functions in multi-state Cox models. In particular, we exemplify the methodology in detail for the simple Cox model with time dependent covariates, where the data may be subject to independent right-censoring or left-truncation. In extensive simulations we investigate their finite sample behaviour. Finally, the methods are utilized to analyze an empirical example.

math.ST

The Liability Threshold Model for Censored Twin Data

Family studies provide an important tool for understanding etiology of diseases, with the key aim of discovering evidence of family aggregation and to determine if such aggregation can be attributed to genetic components. Heritability and concordance estimates are routinely calculated in twin studies of diseases, as a way of quantifying such genetic contribution. The endpoint in these studies are typically defined as occurrence of a disease versus death without the disease. However, a large fraction of the subjects may still be alive at the time of follow-up without having experienced the disease thus still being at risk. Ignoring this right-censoring can lead to severely biased estimates. We propose to extend the classical liability threshold model with inverse probability of censoring weighting of complete observations. This leads to a flexible way of modeling twin concordance and obtaining consistent estimates of heritability. We apply the method in simulations and to data from the population based Danish twin cohort where we describe the dependence in prostate cancer occurrence in twins.

stat.ME

Independent screening for single-index hazard rate models with ultra-high dimensional features

In data sets with many more features than observations, independent screening based on all univariate regression models leads to a computationally convenient variable selection method. Recent efforts have shown that in the case of generalized linear models, independent screening may suffice to capture all relevant features with high probability, even in ultra-high dimension. It is unclear whether this formal sure screening property is attainable when the response is a right-censored survival time. We propose a computationally very efficient independent screening method for survival data which can be viewed as the natural survival equivalent of correlation screening. We state conditions under which the method admits the sure screening property within a general class of single-index hazard rate models with ultra-high dimensional features. An iterative variant is also described which combines screening with penalized regression in order to handle more complex feature covariance structures. The methods are evaluated through simulation studies and through application to a real gene expression dataset.

stat.ML